RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-208	ENST00000536710	DOCK9	Q9BZ29	2069 aa		3.05	□□□□□ -1.92
PRKDC-208	ENST00000536710	IGKV1-6	A0A0C4DH72	117 aa		3.05	□□□□□ -1.92
PRKDC-208	ENST00000536710	hCG_2039718	K7EN88	272 aa		3.05	□□□□□ -1.92
PRKDC-208	ENST00000536710	ZMPSTE24	O75844	475 aa		3.05	□□□□□ -1.92
PRKDC-208	ENST00000536710	LHB	P01229	141 aa		3.05	□□□□□ -1.92
PRKDC-208	ENST00000536710	RLN2	P04090	185 aa		3.05	□□□□□ -1.92
PRKDC-208	ENST00000536710	CDK1	P06493	297 aa		3.05	□□□□□ -1.92
PRKDC-208	ENST00000536710	MPI	P34949	423 aa		3.05	□□□□□ -1.92
PRKDC-208	ENST00000536710	TGFBR1	P36897	503 aa		3.05	□□□□□ -1.92
PRKDC-208	ENST00000536710	MPV17	P39210	176 aa		3.05	□□□□□ -1.92
PRKDC-208	ENST00000536710	VSNL1	P62760	191 aa		3.05	□□□□□ -1.92
PRKDC-208	ENST00000536710	ATP5G2	Q06055	141 aa		3.05	□□□□□ -1.92
PRKDC-208	ENST00000536710	GUSBP1	Q15486	140 aa		3.05	□□□□□ -1.92
PRKDC-208	ENST00000536710	OR8G5	Q8NG78	346 aa		3.05	□□□□□ -1.92
PRKDC-208	ENST00000536710	OR51Q1	Q8NH59	317 aa		3.05	□□□□□ -1.92
PRKDC-208	ENST00000536710	CLHC1	Q8NHS4	586 aa		3.05	□□□□□ -1.92
PRKDC-208	ENST00000536710	RILP	Q96NA2	401 aa		3.05	□□□□□ -1.92
PRKDC-208	ENST00000536710	QKI	Q96PU8	341 aa	Known RBP eCLIP	3.05	□□□□□ -1.92
PRKDC-208	ENST00000536710	DERL3	Q96Q80	235 aa		3.05	□□□□□ -1.92
PRKDC-208	ENST00000536710	SHCBP1L	Q9BZQ2	653 aa		3.05	□□□□□ -1.92
PRKDC-208	ENST00000536710	API5	Q9BZZ5	524 aa	Known RBP	3.05	□□□□□ -1.92
PRKDC-208	ENST00000536710	SDHAF3	Q9NRP4	125 aa		3.05	□□□□□ -1.92
PRKDC-208	ENST00000536710	NLE1	Q9NVX2	485 aa	Predicted RBP	3.05	□□□□□ -1.92
PRKDC-208	ENST00000536710	RBM22	Q9NW64	420 aa	Known RBP eCLIP	3.05	□□□□□ -1.92
PRKDC-208	ENST00000536710	NUP214	P35658	2090 aa	Predicted RBP	3.05	□□□□□ -1.92
PRKDC-208	ENST00000536710	PCM1	Q15154	2024 aa		3.05	□□□□□ -1.92
PRKDC-208	ENST00000536710	ELP1	O95163	1332 aa		3.04	□□□□□ -1.92
PRKDC-208	ENST00000536710	MFNG	O00587	321 aa		3.04	□□□□□ -1.92
PRKDC-208	ENST00000536710	CNMD	O75829	334 aa		3.04	□□□□□ -1.92
PRKDC-208	ENST00000536710	OR2A4	O95047	310 aa		3.04	□□□□□ -1.92
PRKDC-208	ENST00000536710	SEC11B	P0C7V7	166 aa		3.04	□□□□□ -1.92
PRKDC-208	ENST00000536710	ACOT2	P49753	483 aa		3.04	□□□□□ -1.92
PRKDC-208	ENST00000536710	XK	P51811	444 aa		3.04	□□□□□ -1.92
PRKDC-208	ENST00000536710	SLC18A1	P54219	525 aa		3.04	□□□□□ -1.92
PRKDC-208	ENST00000536710	CASP12	Q6UXS9	341 aa		3.04	□□□□□ -1.92
PRKDC-208	ENST00000536710	FAM231D	Q6ZW35	169 aa		3.04	□□□□□ -1.92
PRKDC-208	ENST00000536710	CYP4Z2P	Q8N1L4	340 aa		3.04	□□□□□ -1.92
PRKDC-208	ENST00000536710	OR52N1	Q8NH53	320 aa		3.04	□□□□□ -1.92
PRKDC-208	ENST00000536710	TMIGD2	Q96BF3	282 aa		3.04	□□□□□ -1.92
PRKDC-208	ENST00000536710	CCDC124	Q96CT7	223 aa	Known RBP	3.04	□□□□□ -1.92
PRKDC-208	ENST00000536710	OR2A7	Q96R45	310 aa		3.04	□□□□□ -1.92
PRKDC-208	ENST00000536710	SND1-IT1	Q9HBX3	110 aa		3.04	□□□□□ -1.92
PRKDC-208	ENST00000536710	TMBIM4	Q9HC24	238 aa		3.04	□□□□□ -1.92
PRKDC-208	ENST00000536710	DNAJC27	Q9NZQ0	273 aa		3.04	□□□□□ -1.92
PRKDC-208	ENST00000536710	STX18	Q9P2W9	335 aa	Known RBP	3.04	□□□□□ -1.92
PRKDC-208	ENST00000536710	INSIG2	Q9Y5U4	225 aa		3.04	□□□□□ -1.92
PRKDC-208	ENST00000536710	TAC1	P20366	129 aa		3.03	□□□□□ -1.92
PRKDC-208	ENST00000536710	IDH2	P48735	452 aa	Known RBP	3.03	□□□□□ -1.92
PRKDC-208	ENST00000536710	SP6	Q3SY56	376 aa		3.03	□□□□□ -1.92
PRKDC-208	ENST00000536710	MORN3	Q6PF18	240 aa	Predicted RBP	3.03	□□□□□ -1.92
PRKDC-208	ENST00000536710	TRMT10C	Q7L0Y3	403 aa	Known RBP	3.03	□□□□□ -1.92
PRKDC-208	ENST00000536710	PRNT	Q86SH4	94 aa		3.03	□□□□□ -1.92
PRKDC-208	ENST00000536710	CYP4Z1	Q86W10	505 aa		3.03	□□□□□ -1.92
PRKDC-208	ENST00000536710	LRRC8A	Q8IWT6	810 aa		3.03	□□□□□ -1.92
PRKDC-208	ENST00000536710	GAPT	Q8N292	157 aa		3.03	□□□□□ -1.92
PRKDC-208	ENST00000536710	DRAXIN	Q8NBI3	349 aa	Predicted RBP	3.03	□□□□□ -1.92
PRKDC-208	ENST00000536710	FAM57A	Q8TBR7	257 aa		3.03	□□□□□ -1.92
PRKDC-208	ENST00000536710	ZNF396	Q96N95	335 aa	Predicted RBP	3.03	□□□□□ -1.92
PRKDC-208	ENST00000536710	SPACA5	Q96QH8	159 aa		3.03	□□□□□ -1.92
PRKDC-208	ENST00000536710	ZNF649	Q9BS31	505 aa		3.03	□□□□□ -1.92
PRKDC-208	ENST00000536710	SCRT1	Q9BWW7	348 aa		3.03	□□□□□ -1.92
PRKDC-208	ENST00000536710	MS4A8	Q9BY19	250 aa		3.03	□□□□□ -1.92
PRKDC-208	ENST00000536710	LINC00574	Q9H8X3	128 aa		3.03	□□□□□ -1.92
PRKDC-208	ENST00000536710	IL37	Q9NZH6	218 aa		3.03	□□□□□ -1.92
PRKDC-208	ENST00000536710	CHMP5	Q9NZZ3	219 aa		3.03	□□□□□ -1.92
PRKDC-208	ENST00000536710	NXT1	Q9UKK6	140 aa	Known RBP	3.03	□□□□□ -1.92
PRKDC-208	ENST00000536710	YKT6	O15498	198 aa		3.02	□□□□□ -1.93
PRKDC-208	ENST00000536710	RGS5	O15539	181 aa		3.02	□□□□□ -1.93
PRKDC-208	ENST00000536710	CXorf1	O96002	111 aa		3.02	□□□□□ -1.93
PRKDC-208	ENST00000536710	NRAS	P01111	189 aa		3.02	□□□□□ -1.93
PRKDC-208	ENST00000536710	HRAS	P01112	189 aa		3.02	□□□□□ -1.93
PRKDC-208	ENST00000536710	KRAS	P01116	189 aa		3.02	□□□□□ -1.93
PRKDC-208	ENST00000536710	CD8A	P01732	235 aa		3.02	□□□□□ -1.93
PRKDC-208	ENST00000536710	SNRPA	P09012	282 aa	Known RBP	3.02	□□□□□ -1.93
PRKDC-208	ENST00000536710	TUFM	P49411	452 aa	Known RBP	3.02	□□□□□ -1.93
PRKDC-208	ENST00000536710	GDI2	P50395	445 aa	Known RBP	3.02	□□□□□ -1.93
PRKDC-208	ENST00000536710	RBX1	P62877	108 aa		3.02	□□□□□ -1.93
PRKDC-208	ENST00000536710	ELOC	Q15369	112 aa		3.02	□□□□□ -1.93
PRKDC-208	ENST00000536710	KRTAP13-3	Q3SY46	172 aa		3.02	□□□□□ -1.93
PRKDC-208	ENST00000536710	ACTBL2	Q562R1	376 aa		3.02	□□□□□ -1.93
PRKDC-208	ENST00000536710	ZNF678	Q5SXM1	525 aa		3.02	□□□□□ -1.93
PRKDC-208	ENST00000536710	KCTD16	Q68DU8	428 aa		3.02	□□□□□ -1.93
PRKDC-208	ENST00000536710	DAZ4	Q86SG3	579 aa	Known RBP	3.02	□□□□□ -1.93
PRKDC-208	ENST00000536710	IFT81	Q8WYA0	676 aa		3.02	□□□□□ -1.93
PRKDC-208	ENST00000536710	CPB2	Q96IY4	423 aa		3.02	□□□□□ -1.93
PRKDC-208	ENST00000536710	CATSPER2	Q96P56	530 aa		3.02	□□□□□ -1.93
PRKDC-208	ENST00000536710	GOLPH3	Q9H4A6	298 aa		3.02	□□□□□ -1.93
PRKDC-208	ENST00000536710	PLEKHA1	Q9HB21	404 aa		3.02	□□□□□ -1.93
PRKDC-208	ENST00000536710	ABCB9	Q9NP78	766 aa		3.02	□□□□□ -1.93
PRKDC-208	ENST00000536710	DAZ1	Q9NQZ3	744 aa	Known RBP	3.02	□□□□□ -1.93
PRKDC-208	ENST00000536710	PARP11	Q9NR21	331 aa		3.02	□□□□□ -1.93
PRKDC-208	ENST00000536710	KLF13	Q9Y2Y9	288 aa	Predicted RBP	3.02	□□□□□ -1.93
PRKDC-208	ENST00000536710	IGHV3OR16-8	A0A075B7F1	116 aa		3.01	□□□□□ -1.93
PRKDC-208	ENST00000536710	GOLGA8Q	A0A0J9YX86	632 aa		3.01	□□□□□ -1.93
PRKDC-208	ENST00000536710		C9JQL5	133 aa		3.01	□□□□□ -1.93
PRKDC-208	ENST00000536710	CLDN34	H7C241	214 aa		3.01	□□□□□ -1.93
PRKDC-208	ENST00000536710		K7ERQ8	282 aa		3.01	□□□□□ -1.93
PRKDC-208	ENST00000536710	NUDT2	P50583	147 aa		3.01	□□□□□ -1.93
PRKDC-208	ENST00000536710	CCL23	P55773	120 aa		3.01	□□□□□ -1.93
PRKDC-208	ENST00000536710	TSPAN5	P62079	268 aa		3.01	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms