RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 RHNO1Q9BSD3 238 aa16.16■□□□□ 0.18
SFSWAP-203ENST00000535236 FAM157AC9JC47 383 aa16.16■□□□□ 0.18
SFSWAP-203ENST00000535236 K7ESF4 209 aa16.16■□□□□ 0.18
SFSWAP-203ENST00000535236 PLPP3O14495 311 aa16.16■□□□□ 0.18
SFSWAP-203ENST00000535236 BRS3P32247 399 aa16.16■□□□□ 0.18
SFSWAP-203ENST00000535236 SRRQ9GZT4 340 aa16.16■□□□□ 0.18
SFSWAP-203ENST00000535236 LANCL1O43813 399 aa16.16■□□□□ 0.18
SFSWAP-203ENST00000535236 SLC37A1P57057 533 aa16.16■□□□□ 0.18
SFSWAP-203ENST00000535236 C11orf87Q6NUJ2 197 aa16.16■□□□□ 0.18
SFSWAP-203ENST00000535236 C19orf35Q6ZS72 473 aa16.16■□□□□ 0.18
SFSWAP-203ENST00000535236 C3orf85A0A1B0GTC6 90 aa16.16■□□□□ 0.18
SFSWAP-203ENST00000535236 OR5B21A6NL26 309 aa16.16■□□□□ 0.18
SFSWAP-203ENST00000535236 CALCRP30988 508 aa16.16■□□□□ 0.18
SFSWAP-203ENST00000535236 RNF151Q2KHN1 245 aa16.16■□□□□ 0.18
SFSWAP-203ENST00000535236 BLNKQ8WV28 456 aa16.16■□□□□ 0.18
SFSWAP-203ENST00000535236 TMPRSS13Q9BYE2 586 aa16.16■□□□□ 0.18
SFSWAP-203ENST00000535236 OR2M5A3KFT3 312 aa16.15■□□□□ 0.18
SFSWAP-203ENST00000535236 J3QR89 54 aa16.15■□□□□ 0.18
SFSWAP-203ENST00000535236 TMEM215Q68D42 235 aa16.15■□□□□ 0.18
SFSWAP-203ENST00000535236 C6orf201Q7Z4U5 140 aa16.15■□□□□ 0.18
SFSWAP-203ENST00000535236 NTNG2Q96CW9 530 aa16.15■□□□□ 0.18
SFSWAP-203ENST00000535236 RASL12Q9NYN1 266 aa16.15■□□□□ 0.18
SFSWAP-203ENST00000535236 F2RL2O00254 374 aa16.15■□□□□ 0.18
SFSWAP-203ENST00000535236 GP1BAP07359 652 aa16.15■□□□□ 0.18
SFSWAP-203ENST00000535236 SPNS3Q6ZMD2 512 aa16.15■□□□□ 0.18
SFSWAP-203ENST00000535236 TIPARPQ7Z3E1 657 aaKnown RBP16.15■□□□□ 0.18
SFSWAP-203ENST00000535236 TCFL5Q9UL49 500 aa16.15■□□□□ 0.18
SFSWAP-203ENST00000535236 PDCD6O75340 191 aa16.15■□□□□ 0.18
SFSWAP-203ENST00000535236 LGALS7P47929 136 aa16.15■□□□□ 0.18
SFSWAP-203ENST00000535236 TPPP2P59282 170 aa16.15■□□□□ 0.18
SFSWAP-203ENST00000535236 YBX1P67809 324 aaKnown RBP16.15■□□□□ 0.18
SFSWAP-203ENST00000535236 RTP5Q14D33 572 aa16.15■□□□□ 0.18
SFSWAP-203ENST00000535236 TNXAQ16473 311 aa16.15■□□□□ 0.18
SFSWAP-203ENST00000535236 MYPOPQ86VE0 399 aaPredicted RBP16.15■□□□□ 0.18
SFSWAP-203ENST00000535236 CYSLTR2Q9NS75 346 aa16.15■□□□□ 0.18
SFSWAP-203ENST00000535236 PATE4P0C8F1 98 aa16.15■□□□□ 0.18
SFSWAP-203ENST00000535236 OR3A1P47881 315 aa16.15■□□□□ 0.18
SFSWAP-203ENST00000535236 SLC25A30Q5SVS4 291 aa16.15■□□□□ 0.18
SFSWAP-203ENST00000535236 OR52L2PQ8NGH6 319 aa16.15■□□□□ 0.18
SFSWAP-203ENST00000535236 PECRQ9BY49 303 aa16.15■□□□□ 0.18
SFSWAP-203ENST00000535236 GLDNQ6ZMI3 551 aaPredicted RBP16.14■□□□□ 0.17
SFSWAP-203ENST00000535236 OR2Y1Q8NGV0 311 aa16.14■□□□□ 0.17
SFSWAP-203ENST00000535236 C12orf10Q9HB07 376 aa16.14■□□□□ 0.17
SFSWAP-203ENST00000535236 MPC1Q9Y5U8 109 aa16.14■□□□□ 0.17
SFSWAP-203ENST00000535236 PKD1L3Q7Z443 1732 aa16.14■□□□□ 0.17
SFSWAP-203ENST00000535236 ALX3O95076 343 aa16.14■□□□□ 0.17
SFSWAP-203ENST00000535236 SKP2Q13309 424 aa16.14■□□□□ 0.17
SFSWAP-203ENST00000535236 B3GNTL1Q67FW5 361 aaPredicted RBP16.14■□□□□ 0.17
SFSWAP-203ENST00000535236 SLC6A13Q9NSD5 602 aa16.14■□□□□ 0.17
SFSWAP-203ENST00000535236 MED30Q96HR3 178 aa16.14■□□□□ 0.17
SFSWAP-203ENST00000535236 KLHDC1Q8N7A1 406 aa16.14■□□□□ 0.17
SFSWAP-203ENST00000535236 GPR137Q96N19 417 aa16.14■□□□□ 0.17
SFSWAP-203ENST00000535236 RHOFQ9HBH0 211 aa16.14■□□□□ 0.17
SFSWAP-203ENST00000535236 LYZP61626 148 aa16.13■□□□□ 0.17
SFSWAP-203ENST00000535236 ZNF141Q15928 474 aa16.13■□□□□ 0.17
SFSWAP-203ENST00000535236 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.13■□□□□ 0.17
SFSWAP-203ENST00000535236 ETV3LQ6ZN32 361 aa16.13■□□□□ 0.17
SFSWAP-203ENST00000535236 ZNF429Q86V71 674 aa16.13■□□□□ 0.17
SFSWAP-203ENST00000535236 OR1A1Q9P1Q5 309 aa16.13■□□□□ 0.17
SFSWAP-203ENST00000535236 IGHA1P01876 353 aa16.13■□□□□ 0.17
SFSWAP-203ENST00000535236 IGHA2P01877 340 aa16.13■□□□□ 0.17
SFSWAP-203ENST00000535236 GYPAP02724 150 aa16.13■□□□□ 0.17
SFSWAP-203ENST00000535236 RAC3P60763 192 aa16.13■□□□□ 0.17
SFSWAP-203ENST00000535236 COA4Q9NYJ1 87 aa16.13■□□□□ 0.17
SFSWAP-203ENST00000535236 SP1P08047 785 aa16.13■□□□□ 0.17
SFSWAP-203ENST00000535236 SCGB1C2P0DMR2 95 aa16.13■□□□□ 0.17
SFSWAP-203ENST00000535236 SPINK9Q5DT21 86 aa16.13■□□□□ 0.17
SFSWAP-203ENST00000535236 HOXC8P31273 242 aa16.13■□□□□ 0.17
SFSWAP-203ENST00000535236 CDC20Q12834 499 aa16.13■□□□□ 0.17
SFSWAP-203ENST00000535236 OR5V1Q9UGF6 321 aa16.13■□□□□ 0.17
SFSWAP-203ENST00000535236 SFT2D2O95562 160 aa16.13■□□□□ 0.17
SFSWAP-203ENST00000535236 NUBPLQ8TB37 319 aa16.13■□□□□ 0.17
SFSWAP-203ENST00000535236 ADTRPQ96IZ2 230 aa16.13■□□□□ 0.17
SFSWAP-203ENST00000535236 ZNF275Q9NSD4 429 aaPredicted RBP16.13■□□□□ 0.17
SFSWAP-203ENST00000535236 CACNG5Q9UF02 275 aa16.13■□□□□ 0.17
SFSWAP-203ENST00000535236 TRAPPC1Q9Y5R8 145 aa16.13■□□□□ 0.17
SFSWAP-203ENST00000535236 TMPRSS2O15393 492 aa16.12■□□□□ 0.17
SFSWAP-203ENST00000535236 OPN1MWP04001 364 aa16.12■□□□□ 0.17
SFSWAP-203ENST00000535236 OPN1MW2P0DN77 364 aa16.12■□□□□ 0.17
SFSWAP-203ENST00000535236 OPN1MW3P0DN78 364 aa16.12■□□□□ 0.17
SFSWAP-203ENST00000535236 DRD3P35462 400 aa16.12■□□□□ 0.17
SFSWAP-203ENST00000535236 SLC25A22Q9H936 323 aa16.12■□□□□ 0.17
SFSWAP-203ENST00000535236 DOK5Q9P104 306 aa16.12■□□□□ 0.17
SFSWAP-203ENST00000535236 IGHV3-13P01766 116 aa16.12■□□□□ 0.17
SFSWAP-203ENST00000535236 IGHV3-7P01780 117 aa16.12■□□□□ 0.17
SFSWAP-203ENST00000535236 PRR35P0CG20 571 aa16.12■□□□□ 0.17
SFSWAP-203ENST00000535236 CTGFP29279 349 aa16.12■□□□□ 0.17
SFSWAP-203ENST00000535236 TGIF2LXQ8IUE1 241 aa16.12■□□□□ 0.17
SFSWAP-203ENST00000535236 ADAMTSL3P82987 1691 aa16.12■□□□□ 0.17
SFSWAP-203ENST00000535236 PMCHP20382 165 aa16.12■□□□□ 0.17
SFSWAP-203ENST00000535236 CD96P40200 585 aa16.12■□□□□ 0.17
SFSWAP-203ENST00000535236 SH2D5Q6ZV89 423 aa16.12■□□□□ 0.17
SFSWAP-203ENST00000535236 OR6X1Q8NH79 312 aa16.12■□□□□ 0.17
SFSWAP-203ENST00000535236 WDR34Q96EX3 536 aa16.12■□□□□ 0.17
SFSWAP-203ENST00000535236 PIK3IP1Q96FE7 263 aa16.12■□□□□ 0.17
SFSWAP-203ENST00000535236 AKR7A2O43488 359 aa16.12■□□□□ 0.17
SFSWAP-203ENST00000535236 ZFPL1O95159 310 aa16.12■□□□□ 0.17
SFSWAP-203ENST00000535236 ACTL6AO96019 429 aa16.12■□□□□ 0.17
SFSWAP-203ENST00000535236 CST4P01036 141 aa16.12■□□□□ 0.17
SFSWAP-203ENST00000535236 CDKN2AP42771 156 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms