RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 RBM24Q9BX46 236 aaKnown RBP16.94■□□□□ 0.3
CAPN1-226ENST00000533820 PECRQ9BY49 303 aa16.94■□□□□ 0.3
CAPN1-226ENST00000533820 OPN3Q9H1Y3 402 aaPredicted RBP16.94■□□□□ 0.3
CAPN1-226ENST00000533820 ADAMTS9Q9P2N4 1935 aa16.94■□□□□ 0.3
CAPN1-226ENST00000533820 PNLIPP16233 465 aa16.94■□□□□ 0.3
CAPN1-226ENST00000533820 GUCA1AP43080 201 aaPredicted RBP16.94■□□□□ 0.3
CAPN1-226ENST00000533820 GSK3AP49840 483 aa16.94■□□□□ 0.3
CAPN1-226ENST00000533820 RAB30Q15771 203 aa16.94■□□□□ 0.3
CAPN1-226ENST00000533820 TSPO2Q5TGU0 170 aa16.94■□□□□ 0.3
CAPN1-226ENST00000533820 DOK3Q7L591 496 aa16.94■□□□□ 0.3
CAPN1-226ENST00000533820 POC1AQ8NBT0 407 aa16.94■□□□□ 0.3
CAPN1-226ENST00000533820 OR14K1Q8NGZ2 314 aa16.94■□□□□ 0.3
CAPN1-226ENST00000533820 MRGPRX4Q96LA9 322 aa16.94■□□□□ 0.3
CAPN1-226ENST00000533820 C14orf166Q9Y224 244 aaKnown RBP16.94■□□□□ 0.3
CAPN1-226ENST00000533820 OSGIN2Q9Y236 505 aa16.94■□□□□ 0.3
CAPN1-226ENST00000533820 PIGLQ9Y2B2 252 aa16.94■□□□□ 0.3
CAPN1-226ENST00000533820 S100A2P29034 98 aa16.93■□□□□ 0.3
CAPN1-226ENST00000533820 NAAAQ02083 359 aa16.93■□□□□ 0.3
CAPN1-226ENST00000533820 PHYHD1Q5SRE7 291 aa16.93■□□□□ 0.3
CAPN1-226ENST00000533820 SLC25A47Q6Q0C1 308 aa16.93■□□□□ 0.3
CAPN1-226ENST00000533820 Q7L0L9 218 aa16.93■□□□□ 0.3
CAPN1-226ENST00000533820 SEMA6DQ8NFY4 1073 aa16.93■□□□□ 0.3
CAPN1-226ENST00000533820 OR2AE1Q8NHA4 323 aa16.93■□□□□ 0.3
CAPN1-226ENST00000533820 NECAB3Q96P71 396 aaPredicted RBP16.93■□□□□ 0.3
CAPN1-226ENST00000533820 PLEKHJ1Q9NW61 149 aa16.93■□□□□ 0.3
CAPN1-226ENST00000533820 MYOTQ9UBF9 498 aa16.93■□□□□ 0.3
CAPN1-226ENST00000533820 A0A1W2PPH5 198 aa16.93■□□□□ 0.3
CAPN1-226ENST00000533820 RNASEK-C17orf49H0YIS7 233 aa16.93■□□□□ 0.3
CAPN1-226ENST00000533820 TMEM225BP0DP42 221 aa16.93■□□□□ 0.3
CAPN1-226ENST00000533820 RPS2P15880 293 aaKnown RBP16.93■□□□□ 0.3
CAPN1-226ENST00000533820 GLB1P16278 677 aa16.93■□□□□ 0.3
CAPN1-226ENST00000533820 FXYD4P59646 89 aa16.93■□□□□ 0.3
CAPN1-226ENST00000533820 PDCD1Q15116 288 aa16.93■□□□□ 0.3
CAPN1-226ENST00000533820 RSU1Q15404 277 aa16.93■□□□□ 0.3
CAPN1-226ENST00000533820 AKR1E2Q96JD6 320 aa16.93■□□□□ 0.3
CAPN1-226ENST00000533820 PLA2G2EQ9NZK7 142 aa16.93■□□□□ 0.3
CAPN1-226ENST00000533820 SPRY1O43609 319 aaPredicted RBP16.93■□□□□ 0.3
CAPN1-226ENST00000533820 SCRG1O75711 98 aa16.93■□□□□ 0.3
CAPN1-226ENST00000533820 OR8U9P0C7N5 309 aa16.93■□□□□ 0.3
CAPN1-226ENST00000533820 PTGDSP41222 190 aa16.93■□□□□ 0.3
CAPN1-226ENST00000533820 SPEM2Q0P670 501 aa16.93■□□□□ 0.3
CAPN1-226ENST00000533820 TCEAL6Q6IPX3 200 aa16.93■□□□□ 0.3
CAPN1-226ENST00000533820 ZNF574Q6ZN55 896 aaPredicted RBP16.93■□□□□ 0.3
CAPN1-226ENST00000533820 UBAC2Q8NBM4 344 aa16.93■□□□□ 0.3
CAPN1-226ENST00000533820 OR10D4PQ8NGN7 298 aa16.93■□□□□ 0.3
CAPN1-226ENST00000533820 OR8U1Q8NH10 309 aa16.93■□□□□ 0.3
CAPN1-226ENST00000533820 ADAMTS17Q8TE56 1095 aa16.93■□□□□ 0.3
CAPN1-226ENST00000533820 MRPL24Q96A35 216 aaKnown RBP16.93■□□□□ 0.3
CAPN1-226ENST00000533820 GPR173Q9NS66 373 aa16.93■□□□□ 0.3
CAPN1-226ENST00000533820 RCC2Q9P258 522 aaKnown RBP16.93■□□□□ 0.3
CAPN1-226ENST00000533820 FBLN5Q9UBX5 448 aa16.93■□□□□ 0.3
CAPN1-226ENST00000533820 DMDP11532 3685 aa16.92■□□□□ 0.3
CAPN1-226ENST00000533820 A0A1W2PNV4 684 aa16.92■□□□□ 0.3
CAPN1-226ENST00000533820 HKR1P10072 659 aa16.92■□□□□ 0.3
CAPN1-226ENST00000533820 ZNF708P17019 499 aa16.92■□□□□ 0.3
CAPN1-226ENST00000533820 COTL1Q14019 142 aa16.92■□□□□ 0.3
CAPN1-226ENST00000533820 TAF9Q16594 264 aa16.92■□□□□ 0.3
CAPN1-226ENST00000533820 ACTBL2Q562R1 376 aa16.92■□□□□ 0.3
CAPN1-226ENST00000533820 BSCL2Q96G97 398 aaPredicted RBP16.92■□□□□ 0.3
CAPN1-226ENST00000533820 ZNF385AQ96PM9 386 aaKnown RBP16.92■□□□□ 0.3
CAPN1-226ENST00000533820 AQP10Q96PS8 301 aa16.92■□□□□ 0.3
CAPN1-226ENST00000533820 UCN2Q96RP3 112 aa16.92■□□□□ 0.3
CAPN1-226ENST00000533820 C2orf88Q9BSF0 95 aa16.92■□□□□ 0.3
CAPN1-226ENST00000533820 C20orf24Q9BUV8 137 aa16.92■□□□□ 0.3
CAPN1-226ENST00000533820 FBXL17Q9UF56 701 aa16.92■□□□□ 0.3
CAPN1-226ENST00000533820 K7EPK0 472 aa16.92■□□□□ 0.3
CAPN1-226ENST00000533820 MASP2O00187 686 aa16.92■□□□□ 0.3
CAPN1-226ENST00000533820 DIRAS3O95661 229 aa16.92■□□□□ 0.3
CAPN1-226ENST00000533820 RPL12P30050 165 aaKnown RBP16.92■□□□□ 0.3
CAPN1-226ENST00000533820 FCGR2CP31995 323 aa16.92■□□□□ 0.3
CAPN1-226ENST00000533820 RHBDD2Q6NTF9 364 aa16.92■□□□□ 0.3
CAPN1-226ENST00000533820 Q6ZRG5 221 aa16.92■□□□□ 0.3
CAPN1-226ENST00000533820 LHFPL1Q86WI0 220 aa16.92■□□□□ 0.3
CAPN1-226ENST00000533820 FAM71E2Q8N5Q1 922 aa16.92■□□□□ 0.3
CAPN1-226ENST00000533820 ZNF837Q96EG3 531 aaPredicted RBP16.92■□□□□ 0.3
CAPN1-226ENST00000533820 SULT4A1Q9BR01 284 aa16.92■□□□□ 0.3
CAPN1-226ENST00000533820 FAAP24Q9BTP7 215 aa16.92■□□□□ 0.3
CAPN1-226ENST00000533820 MOB1AQ9H8S9 216 aa16.92■□□□□ 0.3
CAPN1-226ENST00000533820 FAM230AA0A1W2PPH8 454 aa16.91■□□□□ 0.3
CAPN1-226ENST00000533820 NPIPB13A6NJU9 1138 aa16.91■□□□□ 0.3
CAPN1-226ENST00000533820 NPIPB4C9JG80 1138 aa16.91■□□□□ 0.3
CAPN1-226ENST00000533820 XRCC2O43543 280 aa16.91■□□□□ 0.3
CAPN1-226ENST00000533820 PNLIPRP3Q17RR3 467 aa16.91■□□□□ 0.3
CAPN1-226ENST00000533820 PEG10Q86TG7 708 aaKnown RBP16.91■□□□□ 0.3
CAPN1-226ENST00000533820 SULF2Q8IWU5 870 aa16.91■□□□□ 0.3
CAPN1-226ENST00000533820 SECTM1Q8WVN6 248 aa16.91■□□□□ 0.3
CAPN1-226ENST00000533820 GNRHR2Q96P88 292 aa16.91■□□□□ 0.3
CAPN1-226ENST00000533820 SCGB3A2Q96PL1 93 aa16.91■□□□□ 0.3
CAPN1-226ENST00000533820 PI4KAP42356 2102 aa16.91■□□□□ 0.3
CAPN1-226ENST00000533820 IFNA2P01563 188 aa16.91■□□□□ 0.3
CAPN1-226ENST00000533820 RAB5CP51148 216 aa16.91■□□□□ 0.3
CAPN1-226ENST00000533820 CAV2P51636 162 aa16.91■□□□□ 0.3
CAPN1-226ENST00000533820 SUMO3P55854 103 aaPredicted RBP16.91■□□□□ 0.3
CAPN1-226ENST00000533820 CRIP3Q6Q6R5 217 aa16.91■□□□□ 0.3
CAPN1-226ENST00000533820 REEP6Q96HR9 211 aa16.91■□□□□ 0.3
CAPN1-226ENST00000533820 OXGR1Q96P68 337 aa16.91■□□□□ 0.3
CAPN1-226ENST00000533820 SEC11CQ9BY50 192 aa16.91■□□□□ 0.3
CAPN1-226ENST00000533820 DEFB126Q9BYW3 111 aa16.91■□□□□ 0.3
CAPN1-226ENST00000533820 FSCN3Q9NQT6 498 aa16.91■□□□□ 0.3
CAPN1-226ENST00000533820 MARCH11A6NNE9 402 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms