RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 CAPZA1P52907 286 aa24.89■■□□□ 1.58
SSSCA1-207ENST00000533115 ERVK11-1P61568 191 aa24.89■■□□□ 1.58
SSSCA1-207ENST00000533115 GALEQ14376 348 aa24.89■■□□□ 1.58
SSSCA1-207ENST00000533115 C1orf122Q6ZSJ8 110 aa24.89■■□□□ 1.58
SSSCA1-207ENST00000533115 PELI1Q96FA3 418 aa24.89■■□□□ 1.58
SSSCA1-207ENST00000533115 C4orf36Q96KX1 117 aa24.89■■□□□ 1.58
SSSCA1-207ENST00000533115 AMBNQ9NP70 447 aa24.89■■□□□ 1.58
SSSCA1-207ENST00000533115 IGKV1-27A0A075B6S5 117 aa24.88■■□□□ 1.57
SSSCA1-207ENST00000533115 TRBV23-1A0A0A0MS06 115 aa24.88■■□□□ 1.57
SSSCA1-207ENST00000533115 SLC1A7O00341 560 aa24.88■■□□□ 1.57
SSSCA1-207ENST00000533115 FADS2O95864 444 aaKnown RBP24.88■■□□□ 1.57
SSSCA1-207ENST00000533115 CNN3Q15417 329 aaKnown RBP24.88■■□□□ 1.57
SSSCA1-207ENST00000533115 C16orf87Q6PH81 154 aa24.88■■□□□ 1.57
SSSCA1-207ENST00000533115 LHFPL3Q86UP9 236 aa24.88■■□□□ 1.57
SSSCA1-207ENST00000533115 ZNF561Q8N587 486 aa24.88■■□□□ 1.57
SSSCA1-207ENST00000533115 BORCS8Q96FH0 119 aa24.88■■□□□ 1.57
SSSCA1-207ENST00000533115 RDH12Q96NR8 316 aa24.88■■□□□ 1.57
SSSCA1-207ENST00000533115 ALG8Q9BVK2 526 aa24.88■■□□□ 1.57
SSSCA1-207ENST00000533115 SMPD3Q9NY59 655 aaPredicted RBP24.88■■□□□ 1.57
SSSCA1-207ENST00000533115 MYRFQ9Y2G1 1151 aa24.88■■□□□ 1.57
SSSCA1-207ENST00000533115 M0R1W7 72 aa24.87■■□□□ 1.57
SSSCA1-207ENST00000533115 MELTFP08582 738 aa24.87■■□□□ 1.57
SSSCA1-207ENST00000533115 CEBPDP49716 269 aaPredicted RBP24.87■■□□□ 1.57
SSSCA1-207ENST00000533115 RAB40BQ12829 278 aa24.87■■□□□ 1.57
SSSCA1-207ENST00000533115 PIP4P2Q8N4L2 257 aa24.87■■□□□ 1.57
SSSCA1-207ENST00000533115 ZNF555Q8NEP9 628 aa24.87■■□□□ 1.57
SSSCA1-207ENST00000533115 ADAT3Q96EY9 351 aaPredicted RBP24.87■■□□□ 1.57
SSSCA1-207ENST00000533115 A0A0U1RQK1 487 aa24.86■■□□□ 1.57
SSSCA1-207ENST00000533115 IGHA1P01876 353 aa24.86■■□□□ 1.57
SSSCA1-207ENST00000533115 GUCA2AQ02747 115 aa24.86■■□□□ 1.57
SSSCA1-207ENST00000533115 EGFL6Q8IUX8 553 aa24.86■■□□□ 1.57
SSSCA1-207ENST00000533115 SYS1Q8N2H4 156 aa24.86■■□□□ 1.57
SSSCA1-207ENST00000533115 TMEM86BQ8N661 226 aa24.86■■□□□ 1.57
SSSCA1-207ENST00000533115 APH1BQ8WW43 257 aa24.86■■□□□ 1.57
SSSCA1-207ENST00000533115 FGGYQ96C11 551 aa24.86■■□□□ 1.57
SSSCA1-207ENST00000533115 INPP5EQ9NRR6 644 aa24.86■■□□□ 1.57
SSSCA1-207ENST00000533115 MTCH1Q9NZJ7 389 aa24.86■■□□□ 1.57
SSSCA1-207ENST00000533115 OR14J1Q9UGF5 321 aa24.86■■□□□ 1.57
SSSCA1-207ENST00000533115 RPL36Q9Y3U8 105 aaKnown RBP24.86■■□□□ 1.57
SSSCA1-207ENST00000533115 RNASEK-C17orf49H0YIS7 233 aa24.85■■□□□ 1.57
SSSCA1-207ENST00000533115 DLX1P56177 255 aa24.85■■□□□ 1.57
SSSCA1-207ENST00000533115 PRB3Q04118 309 aaPredicted RBP24.85■■□□□ 1.57
SSSCA1-207ENST00000533115 ALKBH1Q13686 389 aaKnown RBP24.85■■□□□ 1.57
SSSCA1-207ENST00000533115 BLMHQ13867 455 aa24.85■■□□□ 1.57
SSSCA1-207ENST00000533115 UTS2BQ765I0 119 aa24.85■■□□□ 1.57
SSSCA1-207ENST00000533115 FAM185AQ8N0U4 392 aa24.85■■□□□ 1.57
SSSCA1-207ENST00000533115 DNAAF1Q8NEP3 725 aa24.85■■□□□ 1.57
SSSCA1-207ENST00000533115 TNFRSF14Q92956 283 aa24.85■■□□□ 1.57
SSSCA1-207ENST00000533115 CEP19Q96LK0 163 aa24.85■■□□□ 1.57
SSSCA1-207ENST00000533115 METTL8Q9H825 291 aaKnown RBP24.85■■□□□ 1.57
SSSCA1-207ENST00000533115 ISG20L2Q9H9L3 353 aaKnown RBP24.85■■□□□ 1.57
SSSCA1-207ENST00000533115 TNFRSF19Q9NS68 423 aa24.85■■□□□ 1.57
SSSCA1-207ENST00000533115 MRPS18AQ9NVS2 196 aaKnown RBP24.85■■□□□ 1.57
SSSCA1-207ENST00000533115 ERVK13-1Q9NX77 482 aa24.85■■□□□ 1.57
SSSCA1-207ENST00000533115 HHLA2Q9UM44 414 aa24.85■■□□□ 1.57
SSSCA1-207ENST00000533115 OR4C45A6NMZ5 311 aa24.84■■□□□ 1.57
SSSCA1-207ENST00000533115 KNG1P01042 644 aa24.84■■□□□ 1.57
SSSCA1-207ENST00000533115 ZNF20P17024 532 aa24.84■■□□□ 1.57
SSSCA1-207ENST00000533115 SLAMF9Q96A28 289 aa24.84■■□□□ 1.57
SSSCA1-207ENST00000533115 ZNF649Q9BS31 505 aa24.84■■□□□ 1.57
SSSCA1-207ENST00000533115 UNKLQ9H9P5 680 aaKnown RBP24.84■■□□□ 1.57
SSSCA1-207ENST00000533115 C19orf12Q9NSK7 152 aa24.84■■□□□ 1.57
SSSCA1-207ENST00000533115 POMT1Q9Y6A1 747 aa24.84■■□□□ 1.57
SSSCA1-207ENST00000533115 IGKV1-9A0A0C4DH69 117 aa24.83■■□□□ 1.57
SSSCA1-207ENST00000533115 EEF1B2P24534 225 aaKnown RBP24.83■■□□□ 1.57
SSSCA1-207ENST00000533115 RBP2P50120 134 aa24.83■■□□□ 1.57
SSSCA1-207ENST00000533115 ATP1B3P54709 279 aa24.83■■□□□ 1.57
SSSCA1-207ENST00000533115 KLRD1Q13241 179 aa24.83■■□□□ 1.57
SSSCA1-207ENST00000533115 KLHL22Q53GT1 634 aa24.83■■□□□ 1.57
SSSCA1-207ENST00000533115 SLC25A26Q70HW3 274 aa24.83■■□□□ 1.57
SSSCA1-207ENST00000533115 ZNF676Q8N7Q3 588 aa24.83■■□□□ 1.57
SSSCA1-207ENST00000533115 OR52I1Q8NGK6 324 aa24.83■■□□□ 1.57
SSSCA1-207ENST00000533115 OR10AC1Q8NH08 325 aa24.83■■□□□ 1.57
SSSCA1-207ENST00000533115 SSMEM1Q8WWF3 244 aa24.83■■□□□ 1.57
SSSCA1-207ENST00000533115 F8VVB4 439 aa24.82■■□□□ 1.56
SSSCA1-207ENST00000533115 F8VWA3 439 aa24.82■■□□□ 1.56
SSSCA1-207ENST00000533115 ATF1P18846 271 aa24.82■■□□□ 1.56
SSSCA1-207ENST00000533115 RPL31P62899 125 aaKnown RBP24.82■■□□□ 1.56
SSSCA1-207ENST00000533115 LPCAT4Q643R3 524 aa24.82■■□□□ 1.56
SSSCA1-207ENST00000533115 NCR3LG1Q68D85 454 aa24.82■■□□□ 1.56
SSSCA1-207ENST00000533115 OR51A4Q8NGJ6 313 aa24.82■■□□□ 1.56
SSSCA1-207ENST00000533115 OR13C3Q8NGS6 347 aa24.82■■□□□ 1.56
SSSCA1-207ENST00000533115 TBC1D15Q8TC07 691 aa24.82■■□□□ 1.56
SSSCA1-207ENST00000533115 CHIAQ9BZP6 476 aa24.82■■□□□ 1.56
SSSCA1-207ENST00000533115 CAB39Q9Y376 341 aaPredicted RBP24.82■■□□□ 1.56
SSSCA1-207ENST00000533115 FAM96BQ9Y3D0 163 aa24.82■■□□□ 1.56
SSSCA1-207ENST00000533115 H0YAE9 185 aa24.81■■□□□ 1.56
SSSCA1-207ENST00000533115 NPFFO15130 113 aa24.81■■□□□ 1.56
SSSCA1-207ENST00000533115 INMTO95050 263 aa24.81■■□□□ 1.56
SSSCA1-207ENST00000533115 TK1P04183 234 aa24.81■■□□□ 1.56
SSSCA1-207ENST00000533115 PRKACBP22694 351 aa24.81■■□□□ 1.56
SSSCA1-207ENST00000533115 AZGP1P25311 298 aaKnown RBP24.81■■□□□ 1.56
SSSCA1-207ENST00000533115 LDLRAD3Q86YD5 345 aa24.81■■□□□ 1.56
SSSCA1-207ENST00000533115 TAF15Q92804 592 aaKnown RBP eCLIP24.81■■□□□ 1.56
SSSCA1-207ENST00000533115 FAM234AQ9H0X4 552 aa24.81■■□□□ 1.56
SSSCA1-207ENST00000533115 A0A1W2PRD5 423 aa24.8■■□□□ 1.56
SSSCA1-207ENST00000533115 A0A1W2PRF3 423 aa24.8■■□□□ 1.56
SSSCA1-207ENST00000533115 A0A1W2PRM7 423 aa24.8■■□□□ 1.56
SSSCA1-207ENST00000533115 FAM181BA6NEQ2 426 aa24.8■■□□□ 1.56
SSSCA1-207ENST00000533115 WBP4O75554 376 aaKnown RBP24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms