RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 BCHEP06276 602 aa3.64□□□□□ -1.83
CSDE1-212ENST00000529046 IGFBP1P08833 259 aaPredicted RBP3.64□□□□□ -1.83
CSDE1-212ENST00000529046 CCDC159P0C7I6 412 aa3.64□□□□□ -1.83
CSDE1-212ENST00000529046 GKN3PP0CG01 181 aa3.64□□□□□ -1.83
CSDE1-212ENST00000529046 PRG2P13727 222 aa3.64□□□□□ -1.83
CSDE1-212ENST00000529046 ZNF14P17017 642 aaPredicted RBP3.64□□□□□ -1.83
CSDE1-212ENST00000529046 GPX2P18283 190 aa3.64□□□□□ -1.83
CSDE1-212ENST00000529046 BCL3P20749 454 aa3.64□□□□□ -1.83
CSDE1-212ENST00000529046 BGNP21810 368 aa3.64□□□□□ -1.83
CSDE1-212ENST00000529046 CALCRP30988 508 aa3.64□□□□□ -1.83
CSDE1-212ENST00000529046 POLR2JP52435 117 aaKnown RBP3.64□□□□□ -1.83
CSDE1-212ENST00000529046 DSTNP60981 165 aa3.64□□□□□ -1.83
CSDE1-212ENST00000529046 RPS23P62266 143 aaKnown RBP3.64□□□□□ -1.83
CSDE1-212ENST00000529046 ZP4Q12836 540 aa3.64□□□□□ -1.83
CSDE1-212ENST00000529046 GGTLC2Q14390 218 aa3.64□□□□□ -1.83
CSDE1-212ENST00000529046 MOGQ16653 247 aa3.64□□□□□ -1.83
CSDE1-212ENST00000529046 CEACAM16Q2WEN9 425 aa3.64□□□□□ -1.83
CSDE1-212ENST00000529046 IFI44LQ53G44 452 aa3.64□□□□□ -1.83
CSDE1-212ENST00000529046 ZNF311Q5JNZ3 666 aa3.64□□□□□ -1.83
CSDE1-212ENST00000529046 MUC21Q5SSG8 566 aa3.64□□□□□ -1.83
CSDE1-212ENST00000529046 C9orf135Q5VTT2 229 aa3.64□□□□□ -1.83
CSDE1-212ENST00000529046 REEP3Q6NUK4 255 aa3.64□□□□□ -1.83
CSDE1-212ENST00000529046 ZNF841Q6ZN19 808 aa3.64□□□□□ -1.83
CSDE1-212ENST00000529046 VRK2Q86Y07 508 aa3.64□□□□□ -1.83
CSDE1-212ENST00000529046 SERPINA12Q8IW75 414 aa3.64□□□□□ -1.83
CSDE1-212ENST00000529046 BATF2Q8N1L9 274 aa3.64□□□□□ -1.83
CSDE1-212ENST00000529046 GPR137CQ8N3F9 429 aa3.64□□□□□ -1.83
CSDE1-212ENST00000529046 ARIH2OSQ8N7S6 290 aa3.64□□□□□ -1.83
CSDE1-212ENST00000529046 GTF2H4Q92759 462 aa3.64□□□□□ -1.83
CSDE1-212ENST00000529046 SAMD8Q96LT4 415 aa3.64□□□□□ -1.83
CSDE1-212ENST00000529046 ZNF607Q96SK3 696 aa3.64□□□□□ -1.83
CSDE1-212ENST00000529046 SPAG8Q99932 426 aaPredicted RBP3.64□□□□□ -1.83
CSDE1-212ENST00000529046 TMEM43Q9BTV4 400 aa3.64□□□□□ -1.83
CSDE1-212ENST00000529046 RSPO3Q9BXY4 272 aaPredicted RBP3.64□□□□□ -1.83
CSDE1-212ENST00000529046 KRTAP4-3Q9BYR4 195 aa3.64□□□□□ -1.83
CSDE1-212ENST00000529046 C1orf198Q9H425 327 aa3.64□□□□□ -1.83
CSDE1-212ENST00000529046 ZNF385DQ9H6B1 395 aa3.64□□□□□ -1.83
CSDE1-212ENST00000529046 CACYBPQ9HB71 228 aaKnown RBP3.64□□□□□ -1.83
CSDE1-212ENST00000529046 CRLF2Q9HC73 371 aa3.64□□□□□ -1.83
CSDE1-212ENST00000529046 RPS10P5Q9NQ39 176 aa3.64□□□□□ -1.83
CSDE1-212ENST00000529046 MRPL39Q9NYK5 338 aaKnown RBP3.64□□□□□ -1.83
CSDE1-212ENST00000529046 IGLV3-9A0A075B6K5 115 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 A0A0B4J2E0 115 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 TRBV2A0A0J9YWF9 115 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 A0A1B0GWA3 101 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 A0A1B0GX12 115 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 hCG_2039718K7EN88 272 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 M0R233 179 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 ANGPT2O15123 496 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 UBDO15205 165 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 BCL2L11O43521 198 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 SERPINB7O75635 380 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 LY6HO94772 140 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 UBL3O95164 117 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 SNAP29O95721 258 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 RENP00797 406 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 PTHP01270 115 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 BGLAPP02818 100 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 SERPINA5P05154 406 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 AREGP15514 252 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 ZNF250P15622 560 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 NCF2P19878 526 aaPredicted RBP3.63□□□□□ -1.83
CSDE1-212ENST00000529046 TUBG1P23258 451 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 GTF2E2P29084 291 aaKnown RBP3.63□□□□□ -1.83
CSDE1-212ENST00000529046 MDH1P40925 334 aaKnown RBP3.63□□□□□ -1.83
CSDE1-212ENST00000529046 RPS5P46782 204 aaKnown RBP3.63□□□□□ -1.83
CSDE1-212ENST00000529046 PITPNBP48739 271 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 ZNF133P52736 654 aaPredicted RBP3.63□□□□□ -1.83
CSDE1-212ENST00000529046 RPS27AP62979 156 aaKnown RBP3.63□□□□□ -1.83
CSDE1-212ENST00000529046 PUDPQ08623 228 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 BNIP2Q12982 314 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 C1DQ13901 141 aaKnown RBP3.63□□□□□ -1.83
CSDE1-212ENST00000529046 HIST3H3Q16695 136 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 GSG1Q2KHT4 349 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 HHATQ5VTY9 493 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 EPGNQ6UW88 154 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 CCBE1Q6UXH8 406 aaPredicted RBP3.63□□□□□ -1.83
CSDE1-212ENST00000529046 STHQ8IWL8 128 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 SLC30A8Q8IWU4 369 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 CADM2Q8N3J6 435 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.63□□□□□ -1.83
CSDE1-212ENST00000529046 OR6X1Q8NH79 312 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 PNPT1Q8TCS8 783 aaKnown RBP3.63□□□□□ -1.83
CSDE1-212ENST00000529046 PCNPQ8WW12 178 aaKnown RBP3.63□□□□□ -1.83
CSDE1-212ENST00000529046 THRSPQ92748 146 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 RDH5Q92781 318 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 SLCO4A1Q96BD0 722 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 SLC25A36Q96CQ1 311 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 PPP1R36Q96LQ0 422 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 ZNF426Q9BUY5 554 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 ZNF416Q9BWM5 594 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 PARD6BQ9BYG5 372 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 SLC19A3Q9BZV2 496 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 POLR2J2Q9GZM3 115 aaKnown RBP3.63□□□□□ -1.83
CSDE1-212ENST00000529046 POLR2J3Q9H1A7 115 aaKnown RBP3.63□□□□□ -1.83
CSDE1-212ENST00000529046 RIBC2Q9H4K1 309 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 WDR55Q9H6Y2 383 aaPredicted RBP3.63□□□□□ -1.83
CSDE1-212ENST00000529046 MARCH7Q9H992 704 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 NOX3Q9HBY0 568 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 TUBG2Q9NRH3 451 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms