RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 TEX36Q5VZQ5 186 aa7□□□□□ -1.29
SSBP3-212ENST00000528930 WDR25Q64LD2 544 aaPredicted RBP7□□□□□ -1.29
SSBP3-212ENST00000528930 WDR82Q6UXN9 313 aa7□□□□□ -1.29
SSBP3-212ENST00000528930 PLEKHG7Q6ZR37 379 aa7□□□□□ -1.29
SSBP3-212ENST00000528930 DOK3Q7L591 496 aa7□□□□□ -1.29
SSBP3-212ENST00000528930 ELMOD2Q8IZ81 293 aa7□□□□□ -1.29
SSBP3-212ENST00000528930 CBR4Q8N4T8 237 aa7□□□□□ -1.29
SSBP3-212ENST00000528930 DHRSXQ8N5I4 330 aa7□□□□□ -1.29
SSBP3-212ENST00000528930 OR2T27Q8NH04 317 aa7□□□□□ -1.29
SSBP3-212ENST00000528930 OR51E1Q8TCB6 317 aa7□□□□□ -1.29
SSBP3-212ENST00000528930 HPSE2Q8WWQ2 592 aa7□□□□□ -1.29
SSBP3-212ENST00000528930 OR5P3Q8WZ94 311 aa7□□□□□ -1.29
SSBP3-212ENST00000528930 PIGCQ92535 297 aa7□□□□□ -1.29
SSBP3-212ENST00000528930 PAPOLGQ9BWT3 736 aaKnown RBP7□□□□□ -1.29
SSBP3-212ENST00000528930 GPR84Q9NQS5 396 aa7□□□□□ -1.29
SSBP3-212ENST00000528930 NECAP2Q9NVZ3 263 aa7□□□□□ -1.29
SSBP3-212ENST00000528930 CTSZQ9UBR2 303 aa7□□□□□ -1.29
SSBP3-212ENST00000528930 IKZF2Q9UKS7 526 aa7□□□□□ -1.29
SSBP3-212ENST00000528930 PCDHGB5Q9Y5G0 923 aa7□□□□□ -1.29
SSBP3-212ENST00000528930 R4GMQ9 66 aa7□□□□□ -1.29
SSBP3-212ENST00000528930 ZNF816-ZNF321PA0A0X1KG74 233 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 KIR2DS1A0A191URI9 304 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 A0A1B0GTI1 187 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 A0A1W2PQL4 384 aaPredicted RBP6.99□□□□□ -1.29
SSBP3-212ENST00000528930 FAM172BPA6NC97 362 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 A6NLC8 198 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 ANXA2P2A6NMY6 339 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 SRRM5B3KS81 715 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.99□□□□□ -1.29
SSBP3-212ENST00000528930 CLDN34H7C241 214 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 J3QRE1 110 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 DLGAP1O14490 977 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 CDIPTO14735 213 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 ENTPD6O75354 484 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 APOL3O95236 402 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 GABRB1P18505 474 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 CFHR2P36980 270 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 GNALP38405 381 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 PITPNBP48739 271 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 ISL1P61371 349 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 SNRPGP62308 76 aaKnown RBP6.99□□□□□ -1.29
SSBP3-212ENST00000528930 ADARB1P78563 741 aaKnown RBP6.99□□□□□ -1.29
SSBP3-212ENST00000528930 IL5RAQ01344 420 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 ZNF85Q03923 595 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 KCNJ8Q15842 424 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 TAF9Q16594 264 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 KLF17Q5JT82 389 aaPredicted RBP6.99□□□□□ -1.29
SSBP3-212ENST00000528930 CASC10Q5T4H9 136 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 LCE5AQ5TCM9 118 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 Q6ZSR3 168 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 LCNL1Q6ZST4 164 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 PRSS48Q7RTY5 328 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 CATSPERDQ86XM0 798 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 FAM90A1Q86YD7 464 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 ANKRD13BQ86YJ7 626 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 FTMTQ8N4E7 242 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 BOLLQ8N9W6 283 aaKnown RBP6.99□□□□□ -1.29
SSBP3-212ENST00000528930 OR8B3Q8NGG8 313 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 OR14K1Q8NGZ2 314 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 NANPQ8TBE9 248 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 LRRC29Q8WV35 223 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 RAB40AQ8WXH6 277 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 SEH1LQ96EE3 360 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 RNF170Q96K19 258 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 DUX5Q96PT3 197 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 OR8B2Q96RD0 313 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 MBOAT4Q96T53 435 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 TBX5Q99593 518 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 MICU1Q9BPX6 476 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 SMURF1Q9HCE7 757 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 AKIP1Q9NQ31 210 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 CLN8Q9UBY8 286 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 AASSQ9UDR5 926 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 OR5V1Q9UGF6 321 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 OR52A1Q9UKL2 312 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 SLC22A13Q9Y226 551 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 ORC6Q9Y5N6 252 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 SNX5Q9Y5X3 404 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 AUP1Q9Y679 476 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 V9GYS6 101 aa6.99□□□□□ -1.29
SSBP3-212ENST00000528930 IGHV3OR15-7A0A075B7D8 119 aa6.98□□□□□ -1.29
SSBP3-212ENST00000528930 TRAV38-1A0A0B4J264 116 aa6.98□□□□□ -1.29
SSBP3-212ENST00000528930 IGHV2-70DA0A0C4DH43 119 aa6.98□□□□□ -1.29
SSBP3-212ENST00000528930 hCG_1807616A0A1W2PRN6 198 aa6.98□□□□□ -1.29
SSBP3-212ENST00000528930 METTL15A6NJ78 407 aa6.98□□□□□ -1.29
SSBP3-212ENST00000528930 TMEM210A6NLX4 147 aa6.98□□□□□ -1.29
SSBP3-212ENST00000528930 C22orf46C9J442 243 aa6.98□□□□□ -1.29
SSBP3-212ENST00000528930 LOC110117498-PIK3R3F6TDL0 507 aa6.98□□□□□ -1.29
SSBP3-212ENST00000528930 ADAM20O43506 726 aa6.98□□□□□ -1.29
SSBP3-212ENST00000528930 NDUFA2O43678 99 aa6.98□□□□□ -1.29
SSBP3-212ENST00000528930 EIF4EBP3O60516 100 aaPredicted RBP6.98□□□□□ -1.29
SSBP3-212ENST00000528930 DHRS3O75911 302 aa6.98□□□□□ -1.29
SSBP3-212ENST00000528930 RPP14O95059 124 aaKnown RBP6.98□□□□□ -1.29
SSBP3-212ENST00000528930 GYPAP02724 150 aa6.98□□□□□ -1.29
SSBP3-212ENST00000528930 AMY2BP19961 511 aa6.98□□□□□ -1.29
SSBP3-212ENST00000528930 M6PRP20645 277 aa6.98□□□□□ -1.29
SSBP3-212ENST00000528930 CCL1P22362 96 aa6.98□□□□□ -1.29
SSBP3-212ENST00000528930 SERPINB10P48595 397 aa6.98□□□□□ -1.29
SSBP3-212ENST00000528930 NPY4RP50391 375 aa6.98□□□□□ -1.29
SSBP3-212ENST00000528930 IL18R1Q13478 541 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms