RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 SLC25A42Q86VD7 318 aa10.2□□□□□ -0.78
USF1-208ENST00000528768 MUC20Q8N307 709 aaPredicted RBP10.2□□□□□ -0.78
USF1-208ENST00000528768 TMEM251Q8N6I4 163 aa10.2□□□□□ -0.78
USF1-208ENST00000528768 NUDCD2Q8WVJ2 157 aa10.2□□□□□ -0.78
USF1-208ENST00000528768 APH1AQ96BI3 265 aa10.2□□□□□ -0.78
USF1-208ENST00000528768 ZNF845Q96IR2 970 aaPredicted RBP10.2□□□□□ -0.78
USF1-208ENST00000528768 SPACA5Q96QH8 159 aa10.2□□□□□ -0.78
USF1-208ENST00000528768 PHB2Q99623 299 aa10.2□□□□□ -0.78
USF1-208ENST00000528768 SLC6A7Q99884 636 aa10.2□□□□□ -0.78
USF1-208ENST00000528768 PRDM14Q9GZV8 571 aa10.2□□□□□ -0.78
USF1-208ENST00000528768 WNT5BQ9H1J7 359 aa10.2□□□□□ -0.78
USF1-208ENST00000528768 BANF2Q9H503 90 aa10.2□□□□□ -0.78
USF1-208ENST00000528768 OPA3Q9H6K4 179 aa10.2□□□□□ -0.78
USF1-208ENST00000528768 LDAHQ9H6V9 325 aa10.2□□□□□ -0.78
USF1-208ENST00000528768 GP6Q9HCN6 339 aa10.2□□□□□ -0.78
USF1-208ENST00000528768 PLA2G3Q9NZ20 509 aa10.2□□□□□ -0.78
USF1-208ENST00000528768 KCNN3Q9UGI6 736 aa10.2□□□□□ -0.78
USF1-208ENST00000528768 UBQLN2Q9UHD9 624 aa10.2□□□□□ -0.78
USF1-208ENST00000528768 ANAPC10Q9UM13 185 aa10.2□□□□□ -0.78
USF1-208ENST00000528768 NOP16Q9Y3C1 178 aaKnown RBP10.2□□□□□ -0.78
USF1-208ENST00000528768 EML6Q6ZMW3 1958 aa10.19□□□□□ -0.78
USF1-208ENST00000528768 ZNF816-ZNF321PA0A0X1KG74 233 aa10.19□□□□□ -0.78
USF1-208ENST00000528768 TUBAL3A6NHL2 446 aa10.19□□□□□ -0.78
USF1-208ENST00000528768 MFNGO00587 321 aa10.19□□□□□ -0.78
USF1-208ENST00000528768 SOCS1O15524 211 aa10.19□□□□□ -0.78
USF1-208ENST00000528768 NOS1APO75052 506 aaPredicted RBP10.19□□□□□ -0.78
USF1-208ENST00000528768 NRASP01111 189 aa10.19□□□□□ -0.78
USF1-208ENST00000528768 SERPINA5P05154 406 aa10.19□□□□□ -0.78
USF1-208ENST00000528768 DBHP09172 617 aa10.19□□□□□ -0.78
USF1-208ENST00000528768 BLVRBP30043 206 aaPredicted RBP10.19□□□□□ -0.78
USF1-208ENST00000528768 HRH1P35367 487 aa10.19□□□□□ -0.78
USF1-208ENST00000528768 MAGEA5P43359 124 aa10.19□□□□□ -0.78
USF1-208ENST00000528768 ARF1P84077 181 aaKnown RBP10.19□□□□□ -0.78
USF1-208ENST00000528768 UBE2V2Q15819 145 aa10.19□□□□□ -0.78
USF1-208ENST00000528768 NKPD1Q17RQ9 610 aa10.19□□□□□ -0.78
USF1-208ENST00000528768 LGALSLQ3ZCW2 172 aaPredicted RBP10.19□□□□□ -0.78
USF1-208ENST00000528768 TEX261Q6UWH6 196 aa10.19□□□□□ -0.78
USF1-208ENST00000528768 PLXDC2Q6UX71 529 aa10.19□□□□□ -0.78
USF1-208ENST00000528768 LYG2Q86SG7 212 aa10.19□□□□□ -0.78
USF1-208ENST00000528768 HOGA1Q86XE5 327 aa10.19□□□□□ -0.78
USF1-208ENST00000528768 TGIF2LYQ8IUE0 185 aa10.19□□□□□ -0.78
USF1-208ENST00000528768 SKA3Q8IX90 412 aa10.19□□□□□ -0.78
USF1-208ENST00000528768 MDS2Q8NDY4 140 aa10.19□□□□□ -0.78
USF1-208ENST00000528768 TMEM104Q8NE00 496 aa10.19□□□□□ -0.78
USF1-208ENST00000528768 OR52B4Q8NGK2 314 aa10.19□□□□□ -0.78
USF1-208ENST00000528768 AKR7LQ8NHP1 331 aa10.19□□□□□ -0.78
USF1-208ENST00000528768 NPRL2Q8WTW4 380 aa10.19□□□□□ -0.78
USF1-208ENST00000528768 ABHD3Q8WU67 409 aa10.19□□□□□ -0.78
USF1-208ENST00000528768 NANOS1Q8WY41 292 aaKnown RBP10.19□□□□□ -0.78
USF1-208ENST00000528768 PIGTQ969N2 578 aa10.19□□□□□ -0.78
USF1-208ENST00000528768 CMBLQ96DG6 245 aa10.19□□□□□ -0.78
USF1-208ENST00000528768 ZNF837Q96EG3 531 aaPredicted RBP10.19□□□□□ -0.78
USF1-208ENST00000528768 MRPS24Q96EL2 167 aaKnown RBP10.19□□□□□ -0.78
USF1-208ENST00000528768 MS4A3Q96HJ5 214 aa10.19□□□□□ -0.78
USF1-208ENST00000528768 C1orf147Q96MC9 270 aaPredicted RBP10.19□□□□□ -0.78
USF1-208ENST00000528768 SOX7Q9BT81 388 aa10.19□□□□□ -0.78
USF1-208ENST00000528768 SLC6A15Q9H2J7 730 aa10.19□□□□□ -0.78
USF1-208ENST00000528768 BCO1Q9HAY6 547 aa10.19□□□□□ -0.78
USF1-208ENST00000528768 GPR173Q9NS66 373 aa10.19□□□□□ -0.78
USF1-208ENST00000528768 ZNF224Q9NZL3 707 aa10.19□□□□□ -0.78
USF1-208ENST00000528768 PIPOXQ9P0Z9 390 aa10.19□□□□□ -0.78
USF1-208ENST00000528768 ELF5Q9UKW6 265 aaPredicted RBP10.19□□□□□ -0.78
USF1-208ENST00000528768 EDARQ9UNE0 448 aa10.19□□□□□ -0.78
USF1-208ENST00000528768 KCNK7Q9Y2U2 307 aa10.19□□□□□ -0.78
USF1-208ENST00000528768 MAB21L2Q9Y586 359 aa10.19□□□□□ -0.78
USF1-208ENST00000528768 U3KQ87 197 aa10.19□□□□□ -0.78
USF1-208ENST00000528768 OR14I1A6ND48 311 aa10.18□□□□□ -0.78
USF1-208ENST00000528768 TOXO94900 526 aa10.18□□□□□ -0.78
USF1-208ENST00000528768 HLA-AP01891 365 aaKnown RBP10.18□□□□□ -0.78
USF1-208ENST00000528768 ZNF35P13682 527 aa10.18□□□□□ -0.78
USF1-208ENST00000528768 SERPINA2P20848 420 aa10.18□□□□□ -0.78
USF1-208ENST00000528768 SEC61A1P61619 476 aaKnown RBP10.18□□□□□ -0.78
USF1-208ENST00000528768 ADORA2A-AS1P86434 159 aa10.18□□□□□ -0.78
USF1-208ENST00000528768 OPCMLQ14982 345 aa10.18□□□□□ -0.78
USF1-208ENST00000528768 SNAI3Q3KNW1 292 aa10.18□□□□□ -0.78
USF1-208ENST00000528768 PABPC1L2AQ5JQF8 200 aa10.18□□□□□ -0.78
USF1-208ENST00000528768 TSPO2Q5TGU0 170 aa10.18□□□□□ -0.78
USF1-208ENST00000528768 ZFP62Q8NB50 900 aaPredicted RBP10.18□□□□□ -0.78
USF1-208ENST00000528768 ZNF680Q8NEM1 530 aa10.18□□□□□ -0.78
USF1-208ENST00000528768 CSNK2A3Q8NEV1 391 aa10.18□□□□□ -0.78
USF1-208ENST00000528768 OR4S1Q8NGB4 309 aa10.18□□□□□ -0.78
USF1-208ENST00000528768 OR11H4Q8NGC9 324 aa10.18□□□□□ -0.78
USF1-208ENST00000528768 OR13C8Q8NGS7 320 aa10.18□□□□□ -0.78
USF1-208ENST00000528768 TERB2Q8NHR7 220 aa10.18□□□□□ -0.78
USF1-208ENST00000528768 ARHGAP5-AS1Q96IT6 56 aa10.18□□□□□ -0.78
USF1-208ENST00000528768 FOXC2Q99958 501 aa10.18□□□□□ -0.78
USF1-208ENST00000528768 NICN1Q9BSH3 213 aa10.18□□□□□ -0.78
USF1-208ENST00000528768 PDCD10Q9BUL8 212 aa10.18□□□□□ -0.78
USF1-208ENST00000528768 PECRQ9BY49 303 aa10.18□□□□□ -0.78
USF1-208ENST00000528768 CXXC4Q9H2H0 198 aa10.18□□□□□ -0.78
USF1-208ENST00000528768 CALHM2Q9HA72 323 aa10.18□□□□□ -0.78
USF1-208ENST00000528768 CA10Q9NS85 328 aa10.18□□□□□ -0.78
USF1-208ENST00000528768 SLC23A1Q9UHI7 598 aa10.18□□□□□ -0.78
USF1-208ENST00000528768 OPN4Q9UHM6 478 aa10.18□□□□□ -0.78
USF1-208ENST00000528768 KIAA1549Q9HCM3 1950 aa10.17□□□□□ -0.78
USF1-208ENST00000528768 DOCK10Q96BY6 2186 aa10.17□□□□□ -0.78
USF1-208ENST00000528768 TRGV5A0A0B4J1U4 118 aa10.17□□□□□ -0.78
USF1-208ENST00000528768 FAM230AA0A1W2PPH8 454 aa10.17□□□□□ -0.78
USF1-208ENST00000528768 PLSCR5A0PG75 271 aa10.17□□□□□ -0.78
USF1-208ENST00000528768 SSX5O60225 188 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms