RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 SNX5Q9Y5X3 404 aa18.18■□□□□ 0.5
TRAPPC4-208ENST00000527680 FAM230AA0A1W2PPH8 454 aa18.17■□□□□ 0.5
TRAPPC4-208ENST00000527680 PQLC2LA1A4F0 135 aa18.17■□□□□ 0.5
TRAPPC4-208ENST00000527680 M0R129 80 aa18.17■□□□□ 0.5
TRAPPC4-208ENST00000527680 RPP14O95059 124 aaKnown RBP18.17■□□□□ 0.5
TRAPPC4-208ENST00000527680 TK1P04183 234 aa18.17■□□□□ 0.5
TRAPPC4-208ENST00000527680 ODF4Q2M2E3 257 aa18.17■□□□□ 0.5
TRAPPC4-208ENST00000527680 PLA1AQ53H76 456 aa18.17■□□□□ 0.5
TRAPPC4-208ENST00000527680 TMEM42Q69YG0 159 aa18.17■□□□□ 0.5
TRAPPC4-208ENST00000527680 HIST2H2BDQ6DRA6 164 aa18.17■□□□□ 0.5
TRAPPC4-208ENST00000527680 FAHD1Q6P587 224 aa18.17■□□□□ 0.5
TRAPPC4-208ENST00000527680 C11orf42Q8N5U0 333 aa18.17■□□□□ 0.5
TRAPPC4-208ENST00000527680 KLHDC1Q8N7A1 406 aa18.17■□□□□ 0.5
TRAPPC4-208ENST00000527680 ASCC1Q8N9N2 400 aaKnown RBP18.17■□□□□ 0.5
TRAPPC4-208ENST00000527680 OR14K1Q8NGZ2 314 aa18.17■□□□□ 0.5
TRAPPC4-208ENST00000527680 TRMT10AQ8TBZ6 339 aaKnown RBP18.17■□□□□ 0.5
TRAPPC4-208ENST00000527680 NRIP2Q9BQI9 281 aa18.17■□□□□ 0.5
TRAPPC4-208ENST00000527680 KRT84Q9NSB2 600 aa18.17■□□□□ 0.5
TRAPPC4-208ENST00000527680 SLC7A11Q9UPY5 501 aa18.17■□□□□ 0.5
TRAPPC4-208ENST00000527680 V9GYS6 101 aa18.17■□□□□ 0.5
TRAPPC4-208ENST00000527680 SRSF10O75494 262 aaKnown RBP18.16■□□□□ 0.5
TRAPPC4-208ENST00000527680 INMTO95050 263 aa18.16■□□□□ 0.5
TRAPPC4-208ENST00000527680 ZNF273Q14593 569 aa18.16■□□□□ 0.5
TRAPPC4-208ENST00000527680 NXNL2Q5VZ03 156 aa18.16■□□□□ 0.5
TRAPPC4-208ENST00000527680 CALHM1Q8IU99 346 aa18.16■□□□□ 0.5
TRAPPC4-208ENST00000527680 YIPF7Q8N8F6 280 aa18.16■□□□□ 0.5
TRAPPC4-208ENST00000527680 IL4I1Q96RQ9 567 aa18.16■□□□□ 0.5
TRAPPC4-208ENST00000527680 RANBP3Q9H6Z4 567 aaPredicted RBP18.16■□□□□ 0.5
TRAPPC4-208ENST00000527680 ADGRL4Q9HBW9 690 aa18.16■□□□□ 0.5
TRAPPC4-208ENST00000527680 CLN6Q9NWW5 311 aa18.16■□□□□ 0.5
TRAPPC4-208ENST00000527680 SLC22A13Q9Y226 551 aa18.16■□□□□ 0.5
TRAPPC4-208ENST00000527680 A0A1B0GTI1 187 aa18.15■□□□□ 0.5
TRAPPC4-208ENST00000527680 H3BSH0 61 aa18.15■□□□□ 0.5
TRAPPC4-208ENST00000527680 MITFO75030 526 aaPredicted RBP18.15■□□□□ 0.5
TRAPPC4-208ENST00000527680 DNAJC8O75937 253 aaPredicted RBP18.15■□□□□ 0.5
TRAPPC4-208ENST00000527680 ARG1P05089 322 aa18.15■□□□□ 0.5
TRAPPC4-208ENST00000527680 KRT8P05787 483 aa18.15■□□□□ 0.5
TRAPPC4-208ENST00000527680 RAB13P51153 203 aa18.15■□□□□ 0.5
TRAPPC4-208ENST00000527680 EDDM3BP56851 147 aa18.15■□□□□ 0.5
TRAPPC4-208ENST00000527680 LIAT1Q6ZQX7 453 aa18.15■□□□□ 0.5
TRAPPC4-208ENST00000527680 LHFPL4Q7Z7J7 247 aa18.15■□□□□ 0.5
TRAPPC4-208ENST00000527680 TMEM163Q8TC26 289 aa18.15■□□□□ 0.5
TRAPPC4-208ENST00000527680 TBX5Q99593 518 aa18.15■□□□□ 0.5
TRAPPC4-208ENST00000527680 ADI1Q9BV57 179 aa18.15■□□□□ 0.5
TRAPPC4-208ENST00000527680 PLEKHA1Q9HB21 404 aa18.15■□□□□ 0.5
TRAPPC4-208ENST00000527680 ABCB10Q9NRK6 738 aa18.15■□□□□ 0.5
TRAPPC4-208ENST00000527680 MRM2Q9UI43 246 aaKnown RBP18.15■□□□□ 0.5
TRAPPC4-208ENST00000527680 MEX3AA1L020 520 aaKnown RBP18.14■□□□□ 0.49
TRAPPC4-208ENST00000527680 G3V2T6 193 aa18.14■□□□□ 0.49
TRAPPC4-208ENST00000527680 CHRM2P08172 466 aa18.14■□□□□ 0.49
TRAPPC4-208ENST00000527680 COL10A1Q03692 680 aa18.14■□□□□ 0.49
TRAPPC4-208ENST00000527680 FAM189A2Q15884 450 aa18.14■□□□□ 0.49
TRAPPC4-208ENST00000527680 AADACL4Q5VUY2 407 aa18.14■□□□□ 0.49
TRAPPC4-208ENST00000527680 CRIP3Q6Q6R5 217 aa18.14■□□□□ 0.49
TRAPPC4-208ENST00000527680 GDPD3Q7L5L3 318 aa18.14■□□□□ 0.49
TRAPPC4-208ENST00000527680 OR13D1Q8NGV5 346 aa18.14■□□□□ 0.49
TRAPPC4-208ENST00000527680 K7N7A8 449 aa18.13■□□□□ 0.49
TRAPPC4-208ENST00000527680 MPZP25189 248 aa18.13■□□□□ 0.49
TRAPPC4-208ENST00000527680 IL24Q13007 206 aa18.13■□□□□ 0.49
TRAPPC4-208ENST00000527680 DYNC1I2Q13409 638 aaKnown RBP18.13■□□□□ 0.49
TRAPPC4-208ENST00000527680 SLX4IPQ5VYV7 408 aa18.13■□□□□ 0.49
TRAPPC4-208ENST00000527680 GID4Q8IVV7 300 aa18.13■□□□□ 0.49
TRAPPC4-208ENST00000527680 PIFOQ8TCI5 191 aa18.13■□□□□ 0.49
TRAPPC4-208ENST00000527680 UTP4Q969X6 686 aaKnown RBP18.13■□□□□ 0.49
TRAPPC4-208ENST00000527680 PKIBQ9C010 78 aa18.13■□□□□ 0.49
TRAPPC4-208ENST00000527680 HES4Q9HCC6 221 aa18.13■□□□□ 0.49
TRAPPC4-208ENST00000527680 DHRS7CA6NNS2 312 aa18.12■□□□□ 0.49
TRAPPC4-208ENST00000527680 C17orf98A8MV24 154 aa18.12■□□□□ 0.49
TRAPPC4-208ENST00000527680 G3V4G9 280 aa18.12■□□□□ 0.49
TRAPPC4-208ENST00000527680 SYT7O43581 403 aa18.12■□□□□ 0.49
TRAPPC4-208ENST00000527680 CHST1O43916 411 aa18.12■□□□□ 0.49
TRAPPC4-208ENST00000527680 OPN1MWP04001 364 aa18.12■□□□□ 0.49
TRAPPC4-208ENST00000527680 OPN1MW2P0DN77 364 aa18.12■□□□□ 0.49
TRAPPC4-208ENST00000527680 OPN1MW3P0DN78 364 aa18.12■□□□□ 0.49
TRAPPC4-208ENST00000527680 EPHA2P29317 976 aa18.12■□□□□ 0.49
TRAPPC4-208ENST00000527680 ATP6V1E1P36543 226 aa18.12■□□□□ 0.49
TRAPPC4-208ENST00000527680 SSX2Q16385 188 aa18.12■□□□□ 0.49
TRAPPC4-208ENST00000527680 LYG1Q8N1E2 194 aa18.12■□□□□ 0.49
TRAPPC4-208ENST00000527680 CFHR4Q92496 578 aa18.12■□□□□ 0.49
TRAPPC4-208ENST00000527680 SLC7A6OSQ96CW6 309 aaPredicted RBP18.12■□□□□ 0.49
TRAPPC4-208ENST00000527680 MALSU1Q96EH3 234 aa18.12■□□□□ 0.49
TRAPPC4-208ENST00000527680 CEP19Q96LK0 163 aa18.12■□□□□ 0.49
TRAPPC4-208ENST00000527680 ZAR1LA6NP61 321 aa18.11■□□□□ 0.49
TRAPPC4-208ENST00000527680 PEX14O75381 377 aa18.11■□□□□ 0.49
TRAPPC4-208ENST00000527680 SERPINA3P01011 423 aa18.11■□□□□ 0.49
TRAPPC4-208ENST00000527680 ZNF728P0DKX0 622 aa18.11■□□□□ 0.49
TRAPPC4-208ENST00000527680 ERVK11-1P61568 191 aa18.11■□□□□ 0.49
TRAPPC4-208ENST00000527680 EFNB1P98172 346 aa18.11■□□□□ 0.49
TRAPPC4-208ENST00000527680 NSUN5P1Q3KNT7 163 aa18.11■□□□□ 0.49
TRAPPC4-208ENST00000527680 ARSJQ5FYB0 599 aaPredicted RBP18.11■□□□□ 0.49
TRAPPC4-208ENST00000527680 EGFL6Q8IUX8 553 aa18.11■□□□□ 0.49
TRAPPC4-208ENST00000527680 DYNAPQ8N1N2 210 aa18.11■□□□□ 0.49
TRAPPC4-208ENST00000527680 RPS4Y2Q8TD47 263 aa18.11■□□□□ 0.49
TRAPPC4-208ENST00000527680 SLAMF9Q96A28 289 aa18.11■□□□□ 0.49
TRAPPC4-208ENST00000527680 CADM1Q9BY67 442 aaKnown RBP18.11■□□□□ 0.49
TRAPPC4-208ENST00000527680 TBL2Q9Y4P3 447 aaKnown RBP18.11■□□□□ 0.49
TRAPPC4-208ENST00000527680 FAM90A8PA6NJQ4 464 aa18.1■□□□□ 0.49
TRAPPC4-208ENST00000527680 FUT6P51993 359 aa18.1■□□□□ 0.49
TRAPPC4-208ENST00000527680 DLX6P56179 175 aa18.1■□□□□ 0.49
TRAPPC4-208ENST00000527680 OR12D2P58182 307 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms