RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 ABI3Q9P2A4 366 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 CGGBP1Q9UFW8 167 aaPredicted RBP5.12□□□□□ -1.59
CD44-225ENST00000527326 PADI3Q9ULW8 664 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 LAMP3Q9UQV4 416 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 TBL2Q9Y4P3 447 aaKnown RBP5.12□□□□□ -1.59
CD44-225ENST00000527326 OR51B2Q9Y5P1 312 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 CASP8AP2Q9UKL3 1982 aa5.12□□□□□ -1.59
CD44-225ENST00000527326 COL4A4P53420 1690 aaPredicted RBP5.12□□□□□ -1.59
CD44-225ENST00000527326 A0A087WV62 115 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 IGHV2-26A0A0B4J1V2 119 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 FAM230AA0A1W2PPH8 454 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 IGLC7A0M8Q6 106 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 GAGE12BA1L429 117 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 OR6C6A6NF89 314 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 RIIAD1A6NNX1 92 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 ZNF716A6NP11 495 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 C4orf47A7E2U8 309 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 H7BYZ3 331 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 M0QYG6 137 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 M0R3H8 397 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 GRM6O15303 877 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 GPR137BO60478 399 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 KLF8O95600 359 aaPredicted RBP5.11□□□□□ -1.59
CD44-225ENST00000527326 CLEC3BP05452 202 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 PFN1P07737 140 aaKnown RBP5.11□□□□□ -1.59
CD44-225ENST00000527326 PRSS56P0CW18 603 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 IGLC2P0DOY2 106 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 IGLC3P0DOY3 106 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 CD99P14209 185 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 CSRP1P21291 193 aaKnown RBP5.11□□□□□ -1.59
CD44-225ENST00000527326 CTSSP25774 331 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 SRP14P37108 136 aaKnown RBP5.11□□□□□ -1.59
CD44-225ENST00000527326 CEACAM3P40198 252 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 PNPLA4P41247 253 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 SLC6A12P48065 614 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 LSSP48449 732 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 PRLHRP49683 370 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 RAB9AP51151 201 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 TAS2R41P59536 307 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 CKS1BP61024 79 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 DCAF7P61962 342 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 RAE1P78406 368 aaKnown RBP5.11□□□□□ -1.59
CD44-225ENST00000527326 LCN2P80188 198 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 FZD2Q14332 565 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 C2orf76Q3KRA6 126 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 Q499Y3 187 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 SPATA45Q537H7 98 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 TRMT12Q53H54 448 aaKnown RBP5.11□□□□□ -1.59
CD44-225ENST00000527326 ZNF385BQ569K4 471 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 TMEM128Q5BJH2 165 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 MS4A13Q5J8X5 152 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 C9orf50Q5SZB4 431 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 GPR157Q5UAW9 335 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 SLC8B1Q6J4K2 584 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 LBX2Q6XYB7 198 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 RBM45Q8IUH3 476 aaKnown RBP5.11□□□□□ -1.59
CD44-225ENST00000527326 APOBEC3FQ8IUX4 373 aaKnown RBP5.11□□□□□ -1.59
CD44-225ENST00000527326 FAM219AQ8IW50 185 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 C1orf174Q8IYL3 243 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 CYB561D1Q8N8Q1 229 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 ZNF709Q8N972 641 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 CHST4Q8NCG5 386 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 RCBTB1Q8NDN9 531 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 BHLHE23Q8NDY6 225 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 OR5A2Q8NGI9 324 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 OR51L1Q8NGJ5 315 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 OR10S1Q8NGN2 331 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 OR13C9Q8NGT0 318 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 FAM213BQ8TBF2 198 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 GRAPLQ8TC17 118 aaPredicted RBP5.11□□□□□ -1.59
CD44-225ENST00000527326 ASB10Q8WXI3 467 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 FGGYQ96C11 551 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 DDIT4LQ96D03 193 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 SFRP2Q96HF1 295 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 POM121L2Q96KW2 1035 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 SLC46A1Q96NT5 459 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 CITED2Q99967 270 aaPredicted RBP5.11□□□□□ -1.59
CD44-225ENST00000527326 RARRES2Q99969 163 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 FAM110AQ9BQ89 295 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 ABHD6Q9BV23 337 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 CXCL16Q9H2A7 254 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 CHODLQ9H9P2 273 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 SDF2L1Q9HCN8 221 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 BCL2L10Q9HD36 194 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 G6PC2Q9NQR9 355 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 SLC2A4RGQ9NR83 387 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 MRPL22Q9NWU5 206 aaKnown RBP5.11□□□□□ -1.59
CD44-225ENST00000527326 P2RX2Q9UBL9 471 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 TUBD1Q9UJT1 453 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 RLFQ13129 1914 aa5.11□□□□□ -1.59
CD44-225ENST00000527326 PPIAL4EA0A075B759 164 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 TRAV26-1A0A087WT03 109 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 IGKV6D-21A0A0A0MT36 114 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 PPIAL4CA0A0B4J2A2 164 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 TRBV5-5A0A0J9YX44 114 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 LOC102723971A0A1B0GUV8 181 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 SMIM35A0A1B0GVV1 85 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 ZNF891A8MT65 544 aaPredicted RBP5.1□□□□□ -1.59
CD44-225ENST00000527326 OR11H12B2RN74 326 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 E5RGE8 158 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms