RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 GABRPO00591 440 aa17.35■□□□□ 0.37
CD44-222ENST00000526025 ZNF205O95201 554 aa17.35■□□□□ 0.37
CD44-222ENST00000526025 INSL4Q14641 139 aa17.35■□□□□ 0.37
CD44-222ENST00000526025 STUMQ69YW2 141 aa17.35■□□□□ 0.37
CD44-222ENST00000526025 SFRP4Q6FHJ7 346 aaPredicted RBP17.35■□□□□ 0.37
CD44-222ENST00000526025 ACP7Q6ZNF0 438 aa17.35■□□□□ 0.37
CD44-222ENST00000526025 BIVMQ86UB2 503 aa17.35■□□□□ 0.37
CD44-222ENST00000526025 PXT1Q8NFP0 134 aa17.35■□□□□ 0.37
CD44-222ENST00000526025 ORAI1Q96D31 301 aa17.35■□□□□ 0.37
CD44-222ENST00000526025 SPACA5Q96QH8 159 aa17.35■□□□□ 0.37
CD44-222ENST00000526025 WDR13Q9H1Z4 485 aa17.35■□□□□ 0.37
CD44-222ENST00000526025 NARFLQ9H6Q4 476 aa17.35■□□□□ 0.37
CD44-222ENST00000526025 TCF7L1Q9HCS4 588 aa17.35■□□□□ 0.37
CD44-222ENST00000526025 MTCH1Q9NZJ7 389 aa17.35■□□□□ 0.37
CD44-222ENST00000526025 NLKQ9UBE8 527 aa17.35■□□□□ 0.37
CD44-222ENST00000526025 DNAJB11Q9UBS4 358 aa17.35■□□□□ 0.37
CD44-222ENST00000526025 SMAD7O15105 426 aaKnown RBP17.34■□□□□ 0.37
CD44-222ENST00000526025 KDM4BO94953 1096 aa17.34■□□□□ 0.37
CD44-222ENST00000526025 WNT2P09544 360 aa17.34■□□□□ 0.37
CD44-222ENST00000526025 IL2RGP31785 369 aa17.34■□□□□ 0.37
CD44-222ENST00000526025 ZNF93P35789 620 aaPredicted RBP17.34■□□□□ 0.37
CD44-222ENST00000526025 POU3F4P49335 361 aa17.34■□□□□ 0.37
CD44-222ENST00000526025 MALRD1Q5VYJ5 2156 aa17.34■□□□□ 0.37
CD44-222ENST00000526025 ASCL4Q6XD76 172 aa17.34■□□□□ 0.37
CD44-222ENST00000526025 NLRC3Q7RTR2 1065 aa17.34■□□□□ 0.37
CD44-222ENST00000526025 PNLDC1Q8NA58 520 aaKnown RBP17.34■□□□□ 0.37
CD44-222ENST00000526025 MAPK1IP1LQ8NDC0 245 aa17.34■□□□□ 0.37
CD44-222ENST00000526025 SLITRK2Q9H156 845 aa17.34■□□□□ 0.37
CD44-222ENST00000526025 SEBOXQ9HB31 216 aaPredicted RBP17.34■□□□□ 0.37
CD44-222ENST00000526025 STUB1Q9UNE7 303 aa17.34■□□□□ 0.37
CD44-222ENST00000526025 A8MXK9 166 aa17.33■□□□□ 0.36
CD44-222ENST00000526025 TRAPPC2LH3BP13 241 aa17.33■□□□□ 0.36
CD44-222ENST00000526025 NXPH2O95156 264 aa17.33■□□□□ 0.36
CD44-222ENST00000526025 SMIM18P0DKX4 95 aa17.33■□□□□ 0.36
CD44-222ENST00000526025 IGHV4-31P0DP07 118 aa17.33■□□□□ 0.36
CD44-222ENST00000526025 CD37P11049 281 aa17.33■□□□□ 0.36
CD44-222ENST00000526025 RPS2P15880 293 aaKnown RBP17.33■□□□□ 0.36
CD44-222ENST00000526025 SRMP19623 302 aa17.33■□□□□ 0.36
CD44-222ENST00000526025 FGF9P31371 208 aaPredicted RBP17.33■□□□□ 0.36
CD44-222ENST00000526025 BMXP51813 675 aa17.33■□□□□ 0.36
CD44-222ENST00000526025 HOXA4Q00056 320 aaPredicted RBP17.33■□□□□ 0.36
CD44-222ENST00000526025 FAM27D1Q5T7N8 215 aa17.33■□□□□ 0.36
CD44-222ENST00000526025 LYPD6Q86Y78 171 aa17.33■□□□□ 0.36
CD44-222ENST00000526025 C19orf18Q8NEA5 215 aa17.33■□□□□ 0.36
CD44-222ENST00000526025 DEFB108BQ8NET1 73 aa17.33■□□□□ 0.36
CD44-222ENST00000526025 OR51F2Q8NH61 342 aa17.33■□□□□ 0.36
CD44-222ENST00000526025 SLAMF9Q96A28 289 aa17.33■□□□□ 0.36
CD44-222ENST00000526025 FOXRED1Q96CU9 486 aaPredicted RBP17.33■□□□□ 0.36
CD44-222ENST00000526025 NEIL1Q96FI4 390 aaPredicted RBP17.33■□□□□ 0.36
CD44-222ENST00000526025 GPER1Q99527 375 aa17.33■□□□□ 0.36
CD44-222ENST00000526025 UQCC2Q9BRT2 126 aa17.33■□□□□ 0.36
CD44-222ENST00000526025 PPIL3Q9H2H8 161 aaKnown RBP17.33■□□□□ 0.36
CD44-222ENST00000526025 MAGEA13PA6NCF6 341 aa17.32■□□□□ 0.36
CD44-222ENST00000526025 B4DSR2 109 aa17.32■□□□□ 0.36
CD44-222ENST00000526025 PLATP00750 562 aa17.32■□□□□ 0.36
CD44-222ENST00000526025 KNG1P01042 644 aa17.32■□□□□ 0.36
CD44-222ENST00000526025 NPY4RP50391 375 aa17.32■□□□□ 0.36
CD44-222ENST00000526025 C11orf91Q3C1V1 193 aa17.32■□□□□ 0.36
CD44-222ENST00000526025 CYB5R2Q6BCY4 276 aa17.32■□□□□ 0.36
CD44-222ENST00000526025 SLC36A1Q7Z2H8 476 aa17.32■□□□□ 0.36
CD44-222ENST00000526025 RNF144BQ7Z419 303 aa17.32■□□□□ 0.36
CD44-222ENST00000526025 LRRTM1Q86UE6 522 aa17.32■□□□□ 0.36
CD44-222ENST00000526025 SATL1Q86VE3 508 aa17.32■□□□□ 0.36
CD44-222ENST00000526025 LINC01356Q8N9X3 169 aa17.32■□□□□ 0.36
CD44-222ENST00000526025 OR8B3Q8NGG8 313 aa17.32■□□□□ 0.36
CD44-222ENST00000526025 ANGPTL6Q8NI99 470 aa17.32■□□□□ 0.36
CD44-222ENST00000526025 RFT1Q96AA3 541 aa17.32■□□□□ 0.36
CD44-222ENST00000526025 ZNF488Q96MN9 340 aa17.32■□□□□ 0.36
CD44-222ENST00000526025 OR8B2Q96RD0 313 aa17.32■□□□□ 0.36
CD44-222ENST00000526025 MRPS26Q9BYN8 205 aaKnown RBP17.32■□□□□ 0.36
CD44-222ENST00000526025 SMURF1Q9HCE7 757 aa17.32■□□□□ 0.36
CD44-222ENST00000526025 SNTG1Q9NSN8 517 aa17.32■□□□□ 0.36
CD44-222ENST00000526025 IL36GQ9NZH8 169 aa17.32■□□□□ 0.36
CD44-222ENST00000526025 ZNF222Q9UK12 451 aa17.32■□□□□ 0.36
CD44-222ENST00000526025 POLR3KQ9Y2Y1 108 aaPredicted RBP17.32■□□□□ 0.36
CD44-222ENST00000526025 IGHV3OR15-7A0A075B7D8 119 aa17.31■□□□□ 0.36
CD44-222ENST00000526025 IGKV1-12A0A0C4DH73 117 aa17.31■□□□□ 0.36
CD44-222ENST00000526025 NKX6-3A6NJ46 265 aa17.31■□□□□ 0.36
CD44-222ENST00000526025 OR2AT4A6NND4 320 aa17.31■□□□□ 0.36
CD44-222ENST00000526025 SPRY1O43609 319 aaPredicted RBP17.31■□□□□ 0.36
CD44-222ENST00000526025 CD5LO43866 347 aa17.31■□□□□ 0.36
CD44-222ENST00000526025 FOXH1O75593 365 aa17.31■□□□□ 0.36
CD44-222ENST00000526025 IGKV1D-12P01611 117 aa17.31■□□□□ 0.36
CD44-222ENST00000526025 GYPAP02724 150 aa17.31■□□□□ 0.36
CD44-222ENST00000526025 MAS1P04201 325 aa17.31■□□□□ 0.36
CD44-222ENST00000526025 TMEM225BP0DP42 221 aa17.31■□□□□ 0.36
CD44-222ENST00000526025 PTGFRP43088 359 aa17.31■□□□□ 0.36
CD44-222ENST00000526025 KRTAP1-1Q07627 177 aa17.31■□□□□ 0.36
CD44-222ENST00000526025 ELP2Q6IA86 826 aa17.31■□□□□ 0.36
CD44-222ENST00000526025 FIP1L1Q6UN15 594 aaKnown RBP17.31■□□□□ 0.36
CD44-222ENST00000526025 ZNF788Q6ZQV5 615 aa17.31■□□□□ 0.36
CD44-222ENST00000526025 Q8NFD4 153 aa17.31■□□□□ 0.36
CD44-222ENST00000526025 OR5D18Q8NGL1 313 aa17.31■□□□□ 0.36
CD44-222ENST00000526025 TNFAIP8L1Q8WVP5 186 aa17.31■□□□□ 0.36
CD44-222ENST00000526025 TRAV1-2A0A0B4J238 106 aa17.3■□□□□ 0.36
CD44-222ENST00000526025 FAM157AC9JC47 383 aa17.3■□□□□ 0.36
CD44-222ENST00000526025 ADAM20O43506 726 aa17.3■□□□□ 0.36
CD44-222ENST00000526025 PSG2P11465 335 aa17.3■□□□□ 0.36
CD44-222ENST00000526025 ADRA2CP18825 462 aa17.3■□□□□ 0.36
CD44-222ENST00000526025 BCL3P20749 454 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms