RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 COMMD2Q86X83 199 aa18.2■□□□□ 0.5
PVT1-218ENST00000523328 OR10G2Q8NGC3 310 aa18.2■□□□□ 0.5
PVT1-218ENST00000523328 INPP5EQ9NRR6 644 aa18.2■□□□□ 0.5
PVT1-218ENST00000523328 ACTR3BQ9P1U1 418 aa18.2■□□□□ 0.5
PVT1-218ENST00000523328 LAMP5Q9UJQ1 280 aa18.2■□□□□ 0.5
PVT1-218ENST00000523328 POLDIP2Q9Y2S7 368 aa18.2■□□□□ 0.5
PVT1-218ENST00000523328 TSSC4Q9Y5U2 329 aaPredicted RBP18.2■□□□□ 0.5
PVT1-218ENST00000523328 TCRBV4S1A1TA0A5B7 111 aa18.19■□□□□ 0.5
PVT1-218ENST00000523328 PSMD9O00233 223 aa18.19■□□□□ 0.5
PVT1-218ENST00000523328 ZNF737O75373 536 aa18.19■□□□□ 0.5
PVT1-218ENST00000523328 DUS4LO95620 317 aaKnown RBP18.19■□□□□ 0.5
PVT1-218ENST00000523328 MPZP25189 248 aa18.19■□□□□ 0.5
PVT1-218ENST00000523328 AZGP1P25311 298 aaKnown RBP18.19■□□□□ 0.5
PVT1-218ENST00000523328 ERVK11-1P61568 191 aa18.19■□□□□ 0.5
PVT1-218ENST00000523328 SLC34A1Q06495 639 aa18.19■□□□□ 0.5
PVT1-218ENST00000523328 SPATS1Q496A3 300 aa18.19■□□□□ 0.5
PVT1-218ENST00000523328 MINOS1Q5TGZ0 78 aa18.19■□□□□ 0.5
PVT1-218ENST00000523328 TMEM42Q69YG0 159 aa18.19■□□□□ 0.5
PVT1-218ENST00000523328 MYDGFQ969H8 173 aa18.19■□□□□ 0.5
PVT1-218ENST00000523328 FEVQ99581 238 aa18.19■□□□□ 0.5
PVT1-218ENST00000523328 MAGIXQ9H6Y5 334 aa18.19■□□□□ 0.5
PVT1-218ENST00000523328 MINOS1-NBL1R4GNA1 71 aa18.19■□□□□ 0.5
PVT1-218ENST00000523328 PQLC2LA1A4F0 135 aa18.18■□□□□ 0.5
PVT1-218ENST00000523328 PRR32B1ATL7 298 aa18.18■□□□□ 0.5
PVT1-218ENST00000523328 DHRS3O75911 302 aa18.18■□□□□ 0.5
PVT1-218ENST00000523328 SLC2A5P22732 501 aa18.18■□□□□ 0.5
PVT1-218ENST00000523328 COL10A1Q03692 680 aa18.18■□□□□ 0.5
PVT1-218ENST00000523328 CD69Q07108 199 aa18.18■□□□□ 0.5
PVT1-218ENST00000523328 SLC35D3Q5M8T2 416 aa18.18■□□□□ 0.5
PVT1-218ENST00000523328 LCN1P1Q5VSP4 162 aa18.18■□□□□ 0.5
PVT1-218ENST00000523328 DEGS2Q6QHC5 323 aa18.18■□□□□ 0.5
PVT1-218ENST00000523328 CENPVQ7Z7K6 275 aaPredicted RBP18.18■□□□□ 0.5
PVT1-218ENST00000523328 CPOQ8IVL8 374 aa18.18■□□□□ 0.5
PVT1-218ENST00000523328 DEFB107AQ8IZN7 70 aa18.18■□□□□ 0.5
PVT1-218ENST00000523328 ASCC1Q8N9N2 400 aaKnown RBP18.18■□□□□ 0.5
PVT1-218ENST00000523328 BBS1Q8NFJ9 593 aa18.18■□□□□ 0.5
PVT1-218ENST00000523328 NUFIP1Q9UHK0 495 aaKnown RBP18.18■□□□□ 0.5
PVT1-218ENST00000523328 SLC22A13Q9Y226 551 aa18.18■□□□□ 0.5
PVT1-218ENST00000523328 HOXD3P31249 432 aaPredicted RBP18.17■□□□□ 0.5
PVT1-218ENST00000523328 EDDM3BP56851 147 aa18.17■□□□□ 0.5
PVT1-218ENST00000523328 ACTA2P62736 377 aa18.17■□□□□ 0.5
PVT1-218ENST00000523328 ACTG2P63267 376 aa18.17■□□□□ 0.5
PVT1-218ENST00000523328 ACTC1P68032 377 aa18.17■□□□□ 0.5
PVT1-218ENST00000523328 ACTA1P68133 377 aa18.17■□□□□ 0.5
PVT1-218ENST00000523328 GINS1Q14691 196 aa18.17■□□□□ 0.5
PVT1-218ENST00000523328 KCTD18Q6PI47 426 aaPredicted RBP18.17■□□□□ 0.5
PVT1-218ENST00000523328 ZNF714Q96N38 554 aa18.17■□□□□ 0.5
PVT1-218ENST00000523328 B9D2Q9BPU9 175 aa18.17■□□□□ 0.5
PVT1-218ENST00000523328 GPR173Q9NS66 373 aa18.17■□□□□ 0.5
PVT1-218ENST00000523328 IGHV2-26A0A0B4J1V2 119 aa18.16■□□□□ 0.5
PVT1-218ENST00000523328 TTRP02766 147 aa18.16■□□□□ 0.5
PVT1-218ENST00000523328 CLVS2Q5SYC1 327 aa18.16■□□□□ 0.5
PVT1-218ENST00000523328 C10orf99Q6UWK7 81 aa18.16■□□□□ 0.5
PVT1-218ENST00000523328 MROQ9BYG7 248 aa18.16■□□□□ 0.5
PVT1-218ENST00000523328 YIPF3Q9GZM5 350 aa18.16■□□□□ 0.5
PVT1-218ENST00000523328 DLGAP1O14490 977 aa18.15■□□□□ 0.5
PVT1-218ENST00000523328 RPS7P62081 194 aaKnown RBP18.15■□□□□ 0.5
PVT1-218ENST00000523328 ROM1Q03395 351 aa18.15■□□□□ 0.5
PVT1-218ENST00000523328 MFGE8Q08431 387 aaPredicted RBP18.15■□□□□ 0.5
PVT1-218ENST00000523328 C16orf89Q6UX73 402 aa18.15■□□□□ 0.5
PVT1-218ENST00000523328 ASRGL1Q7L266 308 aa18.15■□□□□ 0.5
PVT1-218ENST00000523328 GDPD3Q7L5L3 318 aa18.15■□□□□ 0.5
PVT1-218ENST00000523328 C16orf82Q7Z2V1 217 aa18.15■□□□□ 0.5
PVT1-218ENST00000523328 NDNFQ8TB73 568 aa18.15■□□□□ 0.5
PVT1-218ENST00000523328 GIPC3Q8TF64 312 aa18.15■□□□□ 0.5
PVT1-218ENST00000523328 ARL8BQ9NVJ2 186 aa18.15■□□□□ 0.5
PVT1-218ENST00000523328 ZNF446Q9NWS9 450 aa18.15■□□□□ 0.5
PVT1-218ENST00000523328 TAGLN3Q9UI15 199 aa18.15■□□□□ 0.5
PVT1-218ENST00000523328 ARRDC5A6NEK1 342 aa18.14■□□□□ 0.49
PVT1-218ENST00000523328 HMGN1P05114 100 aa18.14■□□□□ 0.49
PVT1-218ENST00000523328 CHRM2P08172 466 aa18.14■□□□□ 0.49
PVT1-218ENST00000523328 CDK5Q00535 292 aa18.14■□□□□ 0.49
PVT1-218ENST00000523328 MEF2CQ06413 473 aaPredicted RBP18.14■□□□□ 0.49
PVT1-218ENST00000523328 ANGPTL5Q86XS5 388 aa18.14■□□□□ 0.49
PVT1-218ENST00000523328 ZNF679Q8IYX0 411 aa18.14■□□□□ 0.49
PVT1-218ENST00000523328 OR8H2Q8N162 312 aa18.14■□□□□ 0.49
PVT1-218ENST00000523328 ZNF676Q8N7Q3 588 aa18.14■□□□□ 0.49
PVT1-218ENST00000523328 LINC00482Q8N8I6 264 aa18.14■□□□□ 0.49
PVT1-218ENST00000523328 OR4X2Q8NGF9 303 aa18.14■□□□□ 0.49
PVT1-218ENST00000523328 PKIBQ9C010 78 aa18.14■□□□□ 0.49
PVT1-218ENST00000523328 LIN7BQ9HAP6 207 aa18.14■□□□□ 0.49
PVT1-218ENST00000523328 DNAJB9Q9UBS3 223 aa18.14■□□□□ 0.49
PVT1-218ENST00000523328 COPS3Q9UNS2 423 aa18.14■□□□□ 0.49
PVT1-218ENST00000523328 SESN1Q9Y6P5 492 aa18.14■□□□□ 0.49
PVT1-218ENST00000523328 V9GYS6 101 aa18.14■□□□□ 0.49
PVT1-218ENST00000523328 E9PQ18 207 aa18.13■□□□□ 0.49
PVT1-218ENST00000523328 F8VVB4 439 aa18.13■□□□□ 0.49
PVT1-218ENST00000523328 F8VWA3 439 aa18.13■□□□□ 0.49
PVT1-218ENST00000523328 H3BUI4 141 aa18.13■□□□□ 0.49
PVT1-218ENST00000523328 SNX3O60493 162 aa18.13■□□□□ 0.49
PVT1-218ENST00000523328 ZNF254O75437 659 aa18.13■□□□□ 0.49
PVT1-218ENST00000523328 SRSF10O75494 262 aaKnown RBP18.13■□□□□ 0.49
PVT1-218ENST00000523328 LPLP06858 475 aa18.13■□□□□ 0.49
PVT1-218ENST00000523328 IL24Q13007 206 aa18.13■□□□□ 0.49
PVT1-218ENST00000523328 APOFQ13790 326 aa18.13■□□□□ 0.49
PVT1-218ENST00000523328 ZNF829Q3KNS6 432 aaPredicted RBP18.13■□□□□ 0.49
PVT1-218ENST00000523328 OR4P4Q8NGL7 312 aa18.13■□□□□ 0.49
PVT1-218ENST00000523328 TTTY10Q9BZA0 68 aa18.13■□□□□ 0.49
PVT1-218ENST00000523328 NDE1Q9NXR1 346 aa18.13■□□□□ 0.49
PVT1-218ENST00000523328 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms