RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 FAM90A15PP0C7V4 464 aa10.77□□□□□ -0.69
NKX3-1-202ENST00000523261 FAM90A13PP0C7W8 464 aa10.77□□□□□ -0.69
NKX3-1-202ENST00000523261 FAM90A14PP0C7W9 464 aa10.77□□□□□ -0.69
NKX3-1-202ENST00000523261 FAM90A24PP0C7X0 464 aa10.77□□□□□ -0.69
NKX3-1-202ENST00000523261 FAM106CPP0CH98 169 aa10.77□□□□□ -0.69
NKX3-1-202ENST00000523261 CNTFRP26992 372 aa10.77□□□□□ -0.69
NKX3-1-202ENST00000523261 POU3F4P49335 361 aa10.77□□□□□ -0.69
NKX3-1-202ENST00000523261 GPR50Q13585 617 aa10.77□□□□□ -0.69
NKX3-1-202ENST00000523261 TNFAIP8L3Q5GJ75 292 aa10.77□□□□□ -0.69
NKX3-1-202ENST00000523261 TPTE2P1Q5T6R2 138 aa10.77□□□□□ -0.69
NKX3-1-202ENST00000523261 BAIAP2L2Q6UXY1 529 aa10.77□□□□□ -0.69
NKX3-1-202ENST00000523261 ABHD12Q8N2K0 398 aa10.77□□□□□ -0.69
NKX3-1-202ENST00000523261 ASCC1Q8N9N2 400 aaKnown RBP10.77□□□□□ -0.69
NKX3-1-202ENST00000523261 PROKR2Q8NFJ6 384 aa10.77□□□□□ -0.69
NKX3-1-202ENST00000523261 ST6GALNAC6Q969X2 333 aa10.77□□□□□ -0.69
NKX3-1-202ENST00000523261 DNAJC27Q9NZQ0 273 aa10.77□□□□□ -0.69
NKX3-1-202ENST00000523261 MUC4Q99102 2169 aa10.76□□□□□ -0.69
NKX3-1-202ENST00000523261 hADV38S2A0JD32 116 aa10.76□□□□□ -0.69
NKX3-1-202ENST00000523261 DHRS12A0PJE2 317 aa10.76□□□□□ -0.69
NKX3-1-202ENST00000523261 FGF16O43320 207 aa10.76□□□□□ -0.69
NKX3-1-202ENST00000523261 NOS1APO75052 506 aaPredicted RBP10.76□□□□□ -0.69
NKX3-1-202ENST00000523261 ELANEP08246 267 aa10.76□□□□□ -0.69
NKX3-1-202ENST00000523261 HSD11B1P28845 292 aa10.76□□□□□ -0.69
NKX3-1-202ENST00000523261 SLC6A6P31641 620 aa10.76□□□□□ -0.69
NKX3-1-202ENST00000523261 CEACAM21Q3KPI0 293 aa10.76□□□□□ -0.69
NKX3-1-202ENST00000523261 CEP78Q5JTW2 689 aa10.76□□□□□ -0.69
NKX3-1-202ENST00000523261 ERICH5Q6P6B1 374 aa10.76□□□□□ -0.69
NKX3-1-202ENST00000523261 CBLL1Q75N03 491 aa10.76□□□□□ -0.69
NKX3-1-202ENST00000523261 GDPD3Q7L5L3 318 aa10.76□□□□□ -0.69
NKX3-1-202ENST00000523261 KRT74Q7RTS7 529 aa10.76□□□□□ -0.69
NKX3-1-202ENST00000523261 LYPD6Q86Y78 171 aa10.76□□□□□ -0.69
NKX3-1-202ENST00000523261 THNSL2Q86YJ6 484 aa10.76□□□□□ -0.69
NKX3-1-202ENST00000523261 OR51L1Q8NGJ5 315 aa10.76□□□□□ -0.69
NKX3-1-202ENST00000523261 ZNF596Q8TC21 504 aa10.76□□□□□ -0.69
NKX3-1-202ENST00000523261 FANK1Q8TC84 345 aa10.76□□□□□ -0.69
NKX3-1-202ENST00000523261 PGAM5Q96HS1 289 aa10.76□□□□□ -0.69
NKX3-1-202ENST00000523261 OR52D1Q9H346 318 aa10.76□□□□□ -0.69
NKX3-1-202ENST00000523261 BRD7Q9NPI1 651 aa10.76□□□□□ -0.69
NKX3-1-202ENST00000523261 CD300AQ9UGN4 299 aa10.76□□□□□ -0.69
NKX3-1-202ENST00000523261 LINC00312Q9Y6C7 94 aa10.76□□□□□ -0.69
NKX3-1-202ENST00000523261 ARRDC5A6NEK1 342 aa10.75□□□□□ -0.69
NKX3-1-202ENST00000523261 LY6LH3BQJ8 138 aa10.75□□□□□ -0.69
NKX3-1-202ENST00000523261 H3BSH0 61 aa10.75□□□□□ -0.69
NKX3-1-202ENST00000523261 AP4M1O00189 453 aa10.75□□□□□ -0.69
NKX3-1-202ENST00000523261 PSMD9O00233 223 aa10.75□□□□□ -0.69
NKX3-1-202ENST00000523261 ZNF593O00488 134 aaPredicted RBP10.75□□□□□ -0.69
NKX3-1-202ENST00000523261 NXPH2O95156 264 aa10.75□□□□□ -0.69
NKX3-1-202ENST00000523261 APOC1P02654 83 aa10.75□□□□□ -0.69
NKX3-1-202ENST00000523261 CEACAM3P40198 252 aa10.75□□□□□ -0.69
NKX3-1-202ENST00000523261 ESRRGP62508 458 aa10.75□□□□□ -0.69
NKX3-1-202ENST00000523261 TEX30Q5JUR7 227 aa10.75□□□□□ -0.69
NKX3-1-202ENST00000523261 RTN4RL2Q86UN3 420 aa10.75□□□□□ -0.69
NKX3-1-202ENST00000523261 OR5A2Q8NGI9 324 aa10.75□□□□□ -0.69
NKX3-1-202ENST00000523261 OR6Q1Q8NGQ2 317 aa10.75□□□□□ -0.69
NKX3-1-202ENST00000523261 DCUN1D4Q92564 292 aa10.75□□□□□ -0.69
NKX3-1-202ENST00000523261 IFT27Q9BW83 186 aa10.75□□□□□ -0.69
NKX3-1-202ENST00000523261 VIPAS39Q9H9C1 493 aa10.75□□□□□ -0.69
NKX3-1-202ENST00000523261 HES4Q9HCC6 221 aa10.75□□□□□ -0.69
NKX3-1-202ENST00000523261 KIAA1456Q9P272 454 aa10.75□□□□□ -0.69
NKX3-1-202ENST00000523261 SLC22A13Q9Y226 551 aa10.75□□□□□ -0.69
NKX3-1-202ENST00000523261 OR5B21A6NL26 309 aa10.74□□□□□ -0.69
NKX3-1-202ENST00000523261 OOSP1A8MZH6 123 aa10.74□□□□□ -0.69
NKX3-1-202ENST00000523261 BUB1B-PAK6H3BSN5 160 aa10.74□□□□□ -0.69
NKX3-1-202ENST00000523261 OVOL1O14753 267 aa10.74□□□□□ -0.69
NKX3-1-202ENST00000523261 IDH3BO43837 385 aa10.74□□□□□ -0.69
NKX3-1-202ENST00000523261 MNDAP41218 407 aa10.74□□□□□ -0.69
NKX3-1-202ENST00000523261 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.74□□□□□ -0.69
NKX3-1-202ENST00000523261 ZNF616Q08AN1 781 aa10.74□□□□□ -0.69
NKX3-1-202ENST00000523261 SLC35F1Q5T1Q4 408 aa10.74□□□□□ -0.69
NKX3-1-202ENST00000523261 CCDC144NLQ6NUI1 221 aa10.74□□□□□ -0.69
NKX3-1-202ENST00000523261 OR8H2Q8N162 312 aa10.74□□□□□ -0.69
NKX3-1-202ENST00000523261 BATF2Q8N1L9 274 aa10.74□□□□□ -0.69
NKX3-1-202ENST00000523261 TPRX1Q8N7U7 411 aa10.74□□□□□ -0.69
NKX3-1-202ENST00000523261 ZNF511Q8NB15 262 aa10.74□□□□□ -0.69
NKX3-1-202ENST00000523261 OR1N2Q8NGR9 330 aa10.74□□□□□ -0.69
NKX3-1-202ENST00000523261 OR2T4Q8NH00 348 aa10.74□□□□□ -0.69
NKX3-1-202ENST00000523261 GON7Q9BXV9 100 aa10.74□□□□□ -0.69
NKX3-1-202ENST00000523261 RABEP2Q9H5N1 569 aa10.74□□□□□ -0.69
NKX3-1-202ENST00000523261 RETNQ9HD89 108 aa10.74□□□□□ -0.69
NKX3-1-202ENST00000523261 ABCA13Q86UQ4 5058 aa10.74□□□□□ -0.69
NKX3-1-202ENST00000523261 A0A1W2PRQ8 180 aa10.73□□□□□ -0.69
NKX3-1-202ENST00000523261 TMEM120BA0PK00 339 aa10.73□□□□□ -0.69
NKX3-1-202ENST00000523261 FAM172BPA6NC97 362 aa10.73□□□□□ -0.69
NKX3-1-202ENST00000523261 FXYD1O00168 92 aa10.73□□□□□ -0.69
NKX3-1-202ENST00000523261 TMEM11P17152 192 aa10.73□□□□□ -0.69
NKX3-1-202ENST00000523261 CFHR3Q02985 330 aa10.73□□□□□ -0.69
NKX3-1-202ENST00000523261 CYLC2Q14093 348 aaPredicted RBP10.73□□□□□ -0.69
NKX3-1-202ENST00000523261 DGCR6Q14129 220 aa10.73□□□□□ -0.69
NKX3-1-202ENST00000523261 EDDM3AQ14507 147 aa10.73□□□□□ -0.69
NKX3-1-202ENST00000523261 HLA-DRB5Q30154 266 aa10.73□□□□□ -0.69
NKX3-1-202ENST00000523261 SGPP2Q8IWX5 399 aa10.73□□□□□ -0.69
NKX3-1-202ENST00000523261 OR8J3Q8NGG0 315 aa10.73□□□□□ -0.69
NKX3-1-202ENST00000523261 TSPEARQ8WU66 669 aa10.73□□□□□ -0.69
NKX3-1-202ENST00000523261 RNF133Q8WVZ7 376 aa10.73□□□□□ -0.69
NKX3-1-202ENST00000523261 CREB3L1Q96BA8 519 aa10.73□□□□□ -0.69
NKX3-1-202ENST00000523261 SH3GL1Q99961 368 aa10.73□□□□□ -0.69
NKX3-1-202ENST00000523261 ZNF286AQ9HBT8 521 aa10.73□□□□□ -0.69
NKX3-1-202ENST00000523261 KRCC1Q9NPI7 259 aaPredicted RBP10.73□□□□□ -0.69
NKX3-1-202ENST00000523261 TRBV4-1A0A0J9YWV2 114 aa10.72□□□□□ -0.69
NKX3-1-202ENST00000523261 TMEM82A0PJX8 343 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms