RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 KDM4BO94953 1096 aa11.07□□□□□ -0.64
CPNE3-205ENST00000522240 IGKV1D-12P01611 117 aa11.07□□□□□ -0.64
CPNE3-205ENST00000522240 EIF4EP06730 217 aaKnown RBP11.07□□□□□ -0.64
CPNE3-205ENST00000522240 ACAA1P09110 424 aaPredicted RBP11.07□□□□□ -0.64
CPNE3-205ENST00000522240 COX6B1P14854 86 aa11.07□□□□□ -0.64
CPNE3-205ENST00000522240 ELK1P19419 428 aa11.07□□□□□ -0.64
CPNE3-205ENST00000522240 TNFSF8P32971 234 aa11.07□□□□□ -0.64
CPNE3-205ENST00000522240 ART1P52961 327 aa11.07□□□□□ -0.64
CPNE3-205ENST00000522240 TNFAIP6P98066 277 aaPredicted RBP11.07□□□□□ -0.64
CPNE3-205ENST00000522240 TLE4Q04727 773 aa11.07□□□□□ -0.64
CPNE3-205ENST00000522240 UNC119Q13432 240 aa11.07□□□□□ -0.64
CPNE3-205ENST00000522240 RSU1Q15404 277 aa11.07□□□□□ -0.64
CPNE3-205ENST00000522240 TESK1Q15569 626 aa11.07□□□□□ -0.64
CPNE3-205ENST00000522240 PCGF3Q3KNV8 242 aa11.07□□□□□ -0.64
CPNE3-205ENST00000522240 C11orf71Q6IPW1 123 aa11.07□□□□□ -0.64
CPNE3-205ENST00000522240 C1QL2Q7Z5L3 287 aa11.07□□□□□ -0.64
CPNE3-205ENST00000522240 Q8IYB0 196 aa11.07□□□□□ -0.64
CPNE3-205ENST00000522240 SCCPDHQ8NBX0 429 aa11.07□□□□□ -0.64
CPNE3-205ENST00000522240 Q8NFD4 153 aa11.07□□□□□ -0.64
CPNE3-205ENST00000522240 ERGIC1Q969X5 290 aa11.07□□□□□ -0.64
CPNE3-205ENST00000522240 MRPS24Q96EL2 167 aaKnown RBP11.07□□□□□ -0.64
CPNE3-205ENST00000522240 OR2V2Q96R30 315 aa11.07□□□□□ -0.64
CPNE3-205ENST00000522240 TMEM59Q9BXS4 323 aa11.07□□□□□ -0.64
CPNE3-205ENST00000522240 WDR12Q9GZL7 423 aaKnown RBP11.07□□□□□ -0.64
CPNE3-205ENST00000522240 MS4A5Q9H3V2 200 aa11.07□□□□□ -0.64
CPNE3-205ENST00000522240 KCNK15Q9H427 330 aa11.07□□□□□ -0.64
CPNE3-205ENST00000522240 HMG20AQ9NP66 347 aa11.07□□□□□ -0.64
CPNE3-205ENST00000522240 AKIP1Q9NQ31 210 aa11.07□□□□□ -0.64
CPNE3-205ENST00000522240 CBLN4Q9NTU7 201 aa11.07□□□□□ -0.64
CPNE3-205ENST00000522240 RABL2AQ9UBK7 228 aaPredicted RBP11.07□□□□□ -0.64
CPNE3-205ENST00000522240 RABL2BQ9UNT1 228 aa11.07□□□□□ -0.64
CPNE3-205ENST00000522240 POLQO75417 2590 aa11.06□□□□□ -0.64
CPNE3-205ENST00000522240 A0A0A6YYH2 397 aa11.06□□□□□ -0.64
CPNE3-205ENST00000522240 A0A1W2PPR1 153 aa11.06□□□□□ -0.64
CPNE3-205ENST00000522240 A6NJ64 397 aa11.06□□□□□ -0.64
CPNE3-205ENST00000522240 FAM25AB3EWG3 89 aa11.06□□□□□ -0.64
CPNE3-205ENST00000522240 FAM25CB3EWG5 89 aa11.06□□□□□ -0.64
CPNE3-205ENST00000522240 FAM25GB3EWG6 89 aa11.06□□□□□ -0.64
CPNE3-205ENST00000522240 TRAPPC2LH3BP13 241 aa11.06□□□□□ -0.64
CPNE3-205ENST00000522240 ANGPTL7O43827 346 aa11.06□□□□□ -0.64
CPNE3-205ENST00000522240 CDC14BO60729 498 aa11.06□□□□□ -0.64
CPNE3-205ENST00000522240 NOS1APO75052 506 aaPredicted RBP11.06□□□□□ -0.64
CPNE3-205ENST00000522240 TPPPO94811 219 aa11.06□□□□□ -0.64
CPNE3-205ENST00000522240 PLATP00750 562 aa11.06□□□□□ -0.64
CPNE3-205ENST00000522240 CSTBP04080 98 aaKnown RBP11.06□□□□□ -0.64
CPNE3-205ENST00000522240 INHBBP09529 407 aa11.06□□□□□ -0.64
CPNE3-205ENST00000522240 TALDO1P37837 337 aa11.06□□□□□ -0.64
CPNE3-205ENST00000522240 SLC22A6Q4U2R8 563 aa11.06□□□□□ -0.64
CPNE3-205ENST00000522240 NHLRC3Q5JS37 347 aa11.06□□□□□ -0.64
CPNE3-205ENST00000522240 SPANXN2Q5MJ10 180 aa11.06□□□□□ -0.64
CPNE3-205ENST00000522240 AGAP6Q5VW22 663 aa11.06□□□□□ -0.64
CPNE3-205ENST00000522240 PRAMEF6Q5VXH4 476 aa11.06□□□□□ -0.64
CPNE3-205ENST00000522240 HIST2H2BCQ6DN03 193 aa11.06□□□□□ -0.64
CPNE3-205ENST00000522240 ELP2Q6IA86 826 aa11.06□□□□□ -0.64
CPNE3-205ENST00000522240 CNIH2Q6PI25 160 aa11.06□□□□□ -0.64
CPNE3-205ENST00000522240 METAP1DQ6UB28 335 aaPredicted RBP11.06□□□□□ -0.64
CPNE3-205ENST00000522240 BAIAP2L2Q6UXY1 529 aa11.06□□□□□ -0.64
CPNE3-205ENST00000522240 LINC00528Q8N1L1 170 aa11.06□□□□□ -0.64
CPNE3-205ENST00000522240 MFSD4AQ8N468 514 aa11.06□□□□□ -0.64
CPNE3-205ENST00000522240 OR51F2Q8NH61 342 aa11.06□□□□□ -0.64
CPNE3-205ENST00000522240 NUDT16L1Q9BRJ7 211 aaKnown RBP11.06□□□□□ -0.64
CPNE3-205ENST00000522240 URM1Q9BTM9 101 aaKnown RBP11.06□□□□□ -0.64
CPNE3-205ENST00000522240 TM2D1Q9BX74 207 aa11.06□□□□□ -0.64
CPNE3-205ENST00000522240 ELL3Q9HB65 397 aaPredicted RBP11.06□□□□□ -0.64
CPNE3-205ENST00000522240 ING4Q9UNL4 249 aa11.06□□□□□ -0.64
CPNE3-205ENST00000522240 METTL21EPA6NDL7 271 aa11.05□□□□□ -0.64
CPNE3-205ENST00000522240 A6NLC8 198 aa11.05□□□□□ -0.64
CPNE3-205ENST00000522240 CLDN25C9JDP6 229 aa11.05□□□□□ -0.64
CPNE3-205ENST00000522240 SYNGR1O43759 233 aa11.05□□□□□ -0.64
CPNE3-205ENST00000522240 CTAG2O75638 210 aa11.05□□□□□ -0.64
CPNE3-205ENST00000522240 CRTAPO75718 401 aaPredicted RBP11.05□□□□□ -0.64
CPNE3-205ENST00000522240 MPIG6BO95866 241 aa11.05□□□□□ -0.64
CPNE3-205ENST00000522240 GRPP07492 148 aa11.05□□□□□ -0.64
CPNE3-205ENST00000522240 DANCRP0C864 163 aa11.05□□□□□ -0.64
CPNE3-205ENST00000522240 PGA5P0DJD9 388 aa11.05□□□□□ -0.64
CPNE3-205ENST00000522240 GTF2F2P13984 249 aa11.05□□□□□ -0.64
CPNE3-205ENST00000522240 MGMTP16455 207 aa11.05□□□□□ -0.64
CPNE3-205ENST00000522240 TNFRSF1AP19438 455 aa11.05□□□□□ -0.64
CPNE3-205ENST00000522240 SERPINA2P20848 420 aa11.05□□□□□ -0.64
CPNE3-205ENST00000522240 CPT2P23786 658 aa11.05□□□□□ -0.64
CPNE3-205ENST00000522240 PTBP1P26599 531 aaKnown RBP eCLIP11.05□□□□□ -0.64
CPNE3-205ENST00000522240 CFHR2P36980 270 aa11.05□□□□□ -0.64
CPNE3-205ENST00000522240 MNDAP41218 407 aa11.05□□□□□ -0.64
CPNE3-205ENST00000522240 NR4A2P43354 598 aa11.05□□□□□ -0.64
CPNE3-205ENST00000522240 EFNB2P52799 333 aa11.05□□□□□ -0.64
CPNE3-205ENST00000522240 RPS27AP62979 156 aaKnown RBP11.05□□□□□ -0.64
CPNE3-205ENST00000522240 ZNF45Q02386 682 aa11.05□□□□□ -0.64
CPNE3-205ENST00000522240 PLA2G7Q13093 441 aa11.05□□□□□ -0.64
CPNE3-205ENST00000522240 RAB12Q6IQ22 244 aa11.05□□□□□ -0.64
CPNE3-205ENST00000522240 CMTM4Q8IZR5 234 aa11.05□□□□□ -0.64
CPNE3-205ENST00000522240 OSR2Q8N2R0 312 aa11.05□□□□□ -0.64
CPNE3-205ENST00000522240 POC1AQ8NBT0 407 aa11.05□□□□□ -0.64
CPNE3-205ENST00000522240 TMEM104Q8NE00 496 aa11.05□□□□□ -0.64
CPNE3-205ENST00000522240 OR10K1Q8NGX5 313 aa11.05□□□□□ -0.64
CPNE3-205ENST00000522240 OR10Z1Q8NGY1 313 aa11.05□□□□□ -0.64
CPNE3-205ENST00000522240 ITLN1Q8WWA0 313 aa11.05□□□□□ -0.64
CPNE3-205ENST00000522240 FAM46BQ96A09 425 aa11.05□□□□□ -0.64
CPNE3-205ENST00000522240 SLAMF9Q96A28 289 aa11.05□□□□□ -0.64
CPNE3-205ENST00000522240 DIRAS2Q96HU8 199 aa11.05□□□□□ -0.64
CPNE3-205ENST00000522240 Q96M66 194 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms