RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 CD36P16671 472 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 ALOX5APP20292 161 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 MSR1P21757 451 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 GADD45AP24522 165 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 EDNRAP25101 427 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 PSMB10P40306 273 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 RGS6P49758 472 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 GTF2A1P52655 376 aaPredicted RBP3.25□□□□□ -1.89
CLK4-207ENST00000520909 GBX2P52951 348 aaPredicted RBP3.25□□□□□ -1.89
CLK4-207ENST00000520909 OR12D2P58182 307 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 LSM3P62310 102 aaKnown RBP3.25□□□□□ -1.89
CLK4-207ENST00000520909 ACTA2P62736 377 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 ACTG2P63267 376 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 ARF1P84077 181 aaKnown RBP3.25□□□□□ -1.89
CLK4-207ENST00000520909 SLC3A1Q07837 685 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 KLRB1Q12918 225 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 MLLT11Q13015 90 aaPredicted RBP3.25□□□□□ -1.89
CLK4-207ENST00000520909 EIF2B1Q14232 305 aaKnown RBP3.25□□□□□ -1.89
CLK4-207ENST00000520909 ACSF3Q4G176 576 aaPredicted RBP3.25□□□□□ -1.89
CLK4-207ENST00000520909 C10orf128Q5T292 105 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 C1orf185Q5T7R7 199 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 TSPO2Q5TGU0 170 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 C9orf135Q5VTT2 229 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 LIPKQ5VXJ0 399 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 OR2A2Q6IF42 318 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 ARL9Q6T311 187 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 C3P1Q6ZMU1 363 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 PLEKHG7Q6ZR37 379 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 FAM220AQ7Z4H9 259 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 DCXRQ7Z4W1 244 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 KRT77Q7Z794 578 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 ZNF554Q86TJ5 538 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 LINC00346Q8IVM7 164 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 GCNT2Q8N0V5 402 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 YIPF7Q8N8F6 280 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 ZFP41Q8N8Y5 198 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 CNEP1R1Q8N9A8 125 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 TMEM116Q8NCL8 245 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 OR2AJ1Q8NGZ0 328 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 OTOSQ8NHW6 89 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 FAM57AQ8TBR7 257 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 ASB17Q8WXJ9 295 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 UFD1Q92890 307 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 TMEM45BQ96B21 275 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 APH1AQ96BI3 265 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 DGCR14Q96DF8 476 aaKnown RBP3.25□□□□□ -1.89
CLK4-207ENST00000520909 SNRNP40Q96DI7 357 aaKnown RBP3.25□□□□□ -1.89
CLK4-207ENST00000520909 YIPF6Q96EC8 236 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 PERPQ96FX8 193 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 C4orf36Q96KX1 117 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 OPALINQ96PE5 141 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 GFI1Q99684 422 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 ZNF649Q9BS31 505 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 TTYH2Q9BSA4 534 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 ABHD6Q9BV23 337 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 FUNDC2Q9BWH2 189 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 NAA50Q9GZZ1 169 aaKnown RBP3.25□□□□□ -1.89
CLK4-207ENST00000520909 RNF122Q9H9V4 155 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 ELOVL3Q9HB03 270 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 ISYNA1Q9NPH2 558 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 POLE4Q9NR33 117 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 GLRX2Q9NS18 164 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 CENPMQ9NSP4 180 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 ASF1BQ9NVP2 202 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 SLCO1C1Q9NYB5 712 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 CLCF1Q9UBD9 225 aa3.25□□□□□ -1.89
CLK4-207ENST00000520909 GTF3C1Q12789 2109 aa3.24□□□□□ -1.89
CLK4-207ENST00000520909 LOC100506127A0A0U1RQW1 187 aa3.24□□□□□ -1.89
CLK4-207ENST00000520909 EPM2AB3EWF7 344 aa3.24□□□□□ -1.89
CLK4-207ENST00000520909 CCRL2O00421 344 aa3.24□□□□□ -1.89
CLK4-207ENST00000520909 PHYHO14832 338 aa3.24□□□□□ -1.89
CLK4-207ENST00000520909 LRRTM2O43300 516 aa3.24□□□□□ -1.89
CLK4-207ENST00000520909 AIREO43918 545 aa3.24□□□□□ -1.89
CLK4-207ENST00000520909 SS18L1O75177 396 aaPredicted RBP3.24□□□□□ -1.89
CLK4-207ENST00000520909 SULT1C4O75897 302 aa3.24□□□□□ -1.89
CLK4-207ENST00000520909 FARS2O95363 451 aaKnown RBP3.24□□□□□ -1.89
CLK4-207ENST00000520909 LALBAP00709 142 aa3.24□□□□□ -1.89
CLK4-207ENST00000520909 HOXD4P09016 255 aaPredicted RBP3.24□□□□□ -1.89
CLK4-207ENST00000520909 CST2P09228 141 aa3.24□□□□□ -1.89
CLK4-207ENST00000520909 H2BFMP0C1H6 154 aa3.24□□□□□ -1.89
CLK4-207ENST00000520909 B4GALT1P15291 398 aa3.24□□□□□ -1.89
CLK4-207ENST00000520909 CELP19835 753 aa3.24□□□□□ -1.89
CLK4-207ENST00000520909 NPR2P20594 1047 aa3.24□□□□□ -1.89
CLK4-207ENST00000520909 AGTR1P30556 359 aa3.24□□□□□ -1.89
CLK4-207ENST00000520909 PTGER4P35408 488 aa3.24□□□□□ -1.89
CLK4-207ENST00000520909 TGFBR2P37173 567 aa3.24□□□□□ -1.89
CLK4-207ENST00000520909 CAPZA2P47755 286 aa3.24□□□□□ -1.89
CLK4-207ENST00000520909 OR3A2P47893 321 aa3.24□□□□□ -1.89
CLK4-207ENST00000520909 CCR9P51686 369 aa3.24□□□□□ -1.89
CLK4-207ENST00000520909 TDGF1P3P51864 188 aa3.24□□□□□ -1.89
CLK4-207ENST00000520909 ZNF133P52736 654 aaPredicted RBP3.24□□□□□ -1.89
CLK4-207ENST00000520909 RIDAP52758 137 aaKnown RBP3.24□□□□□ -1.89
CLK4-207ENST00000520909 TMBIM6P55061 237 aa3.24□□□□□ -1.89
CLK4-207ENST00000520909 TAS2R43P59537 309 aa3.24□□□□□ -1.89
CLK4-207ENST00000520909 LSM6P62312 80 aaKnown RBP3.24□□□□□ -1.89
CLK4-207ENST00000520909 RPS25P62851 125 aaKnown RBP3.24□□□□□ -1.89
CLK4-207ENST00000520909 RBPJQ06330 500 aa3.24□□□□□ -1.89
CLK4-207ENST00000520909 TPBGQ13641 420 aa3.24□□□□□ -1.89
CLK4-207ENST00000520909 LY6DQ14210 128 aa3.24□□□□□ -1.89
CLK4-207ENST00000520909 ENDOGQ14249 297 aaKnown RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms