RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 PRDX4Q13162 271 aa8.87□□□□□ -0.99
MCF2-209ENST00000520602 CLLU1Q5K131 121 aa8.87□□□□□ -0.99
MCF2-209ENST00000520602 VHLLQ6RSH7 139 aa8.87□□□□□ -0.99
MCF2-209ENST00000520602 SEZ6L2Q6UXD5 910 aa8.87□□□□□ -0.99
MCF2-209ENST00000520602 CCDC54Q8NEL0 328 aa8.87□□□□□ -0.99
MCF2-209ENST00000520602 RTN4IP1Q8WWV3 396 aaPredicted RBP8.87□□□□□ -0.99
MCF2-209ENST00000520602 RGCCQ9H4X1 137 aa8.87□□□□□ -0.99
MCF2-209ENST00000520602 TTLL8A6PVC2 850 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 SP1P08047 785 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 TBC1D28Q2M2D7 210 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 HIKESHIQ53FT3 197 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 FAM76BQ5HYJ3 339 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 CLEC18BQ6UXF7 455 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 IQCF2Q8IXL9 164 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 STOML3Q8TAV4 291 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 DDA1Q9BW61 102 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 GPR160Q9UJ42 338 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 LYZL6O75951 148 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 NXPH2O95156 264 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 ZNF250P15622 560 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 FUT3P21217 361 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 FPR2P25090 351 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 Q0VFX4 171 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 MPPED2Q15777 294 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 PLAC9Q5JTB6 97 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 C10orf128Q5T292 105 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 PAQR4Q8N4S7 273 aaPredicted RBP8.86□□□□□ -0.99
MCF2-209ENST00000520602 OR6K3Q8NGY3 331 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 NINJ1Q92982 152 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 TMEM54Q969K7 222 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 ZNF75AQ96N20 296 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 DNTTIP1Q9H147 329 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 DUSP13Q9UII6 198 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 TRAPPC2LQ9UL33 140 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 PINLYPA6NC86 204 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 LEUTXA8MZ59 168 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 HSD17B6O14756 317 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 RPA2P15927 270 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 NME2P22392 152 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 CA6P23280 308 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 GCH1P30793 250 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 SLC36A1Q7Z2H8 476 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 EXTL1Q92935 676 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 RNF166Q96A37 237 aaPredicted RBP8.86□□□□□ -0.99
MCF2-209ENST00000520602 ALX4Q9H161 411 aaPredicted RBP8.86□□□□□ -0.99
MCF2-209ENST00000520602 UFSP2Q9NUQ7 469 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 LHX6Q9UPM6 363 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 IGKV1-9A0A0C4DH69 117 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 HMSDA8MTL9 139 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 NKX2-8O15522 239 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 SOX8P57073 446 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 SNTB1Q13884 538 aaKnown RBP8.86□□□□□ -0.99
MCF2-209ENST00000520602 AANATQ16613 207 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 TFAP2EQ6VUC0 442 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 RTN4RL2Q86UN3 420 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 TMEM200AQ86VY9 491 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 WDR13Q9H1Z4 485 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 AK3Q9UIJ7 227 aa8.86□□□□□ -0.99
MCF2-209ENST00000520602 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.85□□□□□ -0.99
MCF2-209ENST00000520602 C10orf142B7Z368 130 aa8.85□□□□□ -0.99
MCF2-209ENST00000520602 SFT2D2O95562 160 aa8.85□□□□□ -0.99
MCF2-209ENST00000520602 ACKR3P25106 362 aa8.85□□□□□ -0.99
MCF2-209ENST00000520602 ASPHD2Q6ICH7 369 aa8.85□□□□□ -0.99
MCF2-209ENST00000520602 ZIC4Q8N9L1 334 aa8.85□□□□□ -0.99
MCF2-209ENST00000520602 PIPOXQ9P0Z9 390 aa8.85□□□□□ -0.99
MCF2-209ENST00000520602 ANXA10Q9UJ72 324 aa8.85□□□□□ -0.99
MCF2-209ENST00000520602 PLSCR5A0PG75 271 aa8.85□□□□□ -0.99
MCF2-209ENST00000520602 MEX3AA1L020 520 aaKnown RBP8.85□□□□□ -0.99
MCF2-209ENST00000520602 F8W036 122 aa8.85□□□□□ -0.99
MCF2-209ENST00000520602 DEGS1O15121 323 aa8.85□□□□□ -0.99
MCF2-209ENST00000520602 TNFSF12O43508 249 aa8.85□□□□□ -0.99
MCF2-209ENST00000520602 FABP6P51161 128 aa8.85□□□□□ -0.99
MCF2-209ENST00000520602 TMEM50BP56557 158 aa8.85□□□□□ -0.99
MCF2-209ENST00000520602 BLOC1S1P78537 153 aa8.85□□□□□ -0.99
MCF2-209ENST00000520602 RNPS1Q15287 305 aaKnown RBP8.85□□□□□ -0.99
MCF2-209ENST00000520602 PAN3Q58A45 887 aaKnown RBP8.85□□□□□ -0.99
MCF2-209ENST00000520602 BEND4Q6ZU67 534 aa8.85□□□□□ -0.99
MCF2-209ENST00000520602 TMEM123Q8N131 208 aa8.85□□□□□ -0.99
MCF2-209ENST00000520602 ZSCAN4Q8NAM6 433 aaPredicted RBP8.85□□□□□ -0.99
MCF2-209ENST00000520602 OR51H1Q8NH63 302 aa8.85□□□□□ -0.99
MCF2-209ENST00000520602 MITD1Q8WV92 249 aa8.85□□□□□ -0.99
MCF2-209ENST00000520602 ARL11Q969Q4 196 aa8.85□□□□□ -0.99
MCF2-209ENST00000520602 CXorf58Q96LI9 332 aa8.85□□□□□ -0.99
MCF2-209ENST00000520602 C2orf50Q96LR7 162 aa8.85□□□□□ -0.99
MCF2-209ENST00000520602 KCNIP1Q9NZI2 227 aa8.85□□□□□ -0.99
MCF2-209ENST00000520602 ZNF175Q9Y473 711 aa8.85□□□□□ -0.99
MCF2-209ENST00000520602 SIRPB1O00241 398 aa8.85□□□□□ -0.99
MCF2-209ENST00000520602 EFSO43281 561 aa8.85□□□□□ -0.99
MCF2-209ENST00000520602 TIMM8AO60220 97 aaPredicted RBP8.85□□□□□ -0.99
MCF2-209ENST00000520602 LRP3O75074 770 aa8.85□□□□□ -0.99
MCF2-209ENST00000520602 OR8U9P0C7N5 309 aa8.85□□□□□ -0.99
MCF2-209ENST00000520602 RAB32Q13637 225 aa8.85□□□□□ -0.99
MCF2-209ENST00000520602 LTC4SQ16873 150 aa8.85□□□□□ -0.99
MCF2-209ENST00000520602 C17orf50Q8WW18 174 aa8.85□□□□□ -0.99
MCF2-209ENST00000520602 RRNAD1Q96FB5 475 aaKnown RBP8.85□□□□□ -0.99
MCF2-209ENST00000520602 OCSTAMPQ9BR26 566 aa8.85□□□□□ -0.99
MCF2-209ENST00000520602 WNT5BQ9H1J7 359 aa8.85□□□□□ -0.99
MCF2-209ENST00000520602 ZNF107Q9UII5 783 aaPredicted RBP8.85□□□□□ -0.99
MCF2-209ENST00000520602 EDARQ9UNE0 448 aa8.85□□□□□ -0.99
MCF2-209ENST00000520602 MED6O75586 246 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms