RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 MDP1Q86V88 176 aa2.65□□□□□ -1.99
SQLE-204ENST00000520493 FUNDC1Q8IVP5 155 aa2.65□□□□□ -1.99
SQLE-204ENST00000520493 MKXQ8IYA7 352 aa2.65□□□□□ -1.99
SQLE-204ENST00000520493 ZCCHC24Q8N2G6 241 aaKnown RBP2.65□□□□□ -1.99
SQLE-204ENST00000520493 Q8N976 141 aa2.65□□□□□ -1.99
SQLE-204ENST00000520493 ZNF565Q8N9K5 539 aa2.65□□□□□ -1.99
SQLE-204ENST00000520493 OR5L1Q8NGL2 311 aa2.65□□□□□ -1.99
SQLE-204ENST00000520493 SYNPRQ8TBG9 265 aa2.65□□□□□ -1.99
SQLE-204ENST00000520493 TMEM158Q8WZ71 300 aa2.65□□□□□ -1.99
SQLE-204ENST00000520493 BIRC8Q96P09 236 aa2.65□□□□□ -1.99
SQLE-204ENST00000520493 OR4K3Q96R72 315 aa2.65□□□□□ -1.99
SQLE-204ENST00000520493 METTL26Q96S19 204 aa2.65□□□□□ -1.99
SQLE-204ENST00000520493 PITX2Q99697 317 aa2.65□□□□□ -1.99
SQLE-204ENST00000520493 POTEKPQ9BYX7 375 aa2.65□□□□□ -1.99
SQLE-204ENST00000520493 RDH14Q9HBH5 336 aa2.65□□□□□ -1.99
SQLE-204ENST00000520493 HMG20AQ9NP66 347 aa2.65□□□□□ -1.99
SQLE-204ENST00000520493 USE1Q9NZ43 259 aa2.65□□□□□ -1.99
SQLE-204ENST00000520493 PRO0628Q9UI54 55 aa2.65□□□□□ -1.99
SQLE-204ENST00000520493 TRBV6-6A0A0A6YYG2 114 aa2.64□□□□□ -1.99
SQLE-204ENST00000520493 A0A1B0GVX0 72 aa2.64□□□□□ -1.99
SQLE-204ENST00000520493 GOLGA8KD6RF30 607 aa2.64□□□□□ -1.99
SQLE-204ENST00000520493 FTCDNL1E5RQL4 147 aa2.64□□□□□ -1.99
SQLE-204ENST00000520493 GOLGA8MH3BSY2 632 aa2.64□□□□□ -1.99
SQLE-204ENST00000520493 J3QLI3 93 aa2.64□□□□□ -1.99
SQLE-204ENST00000520493 UPK2O00526 184 aa2.64□□□□□ -1.99
SQLE-204ENST00000520493 SOCS1O15524 211 aa2.64□□□□□ -1.99
SQLE-204ENST00000520493 FGF16O43320 207 aa2.64□□□□□ -1.99
SQLE-204ENST00000520493 MPZL2O60487 215 aa2.64□□□□□ -1.99
SQLE-204ENST00000520493 CCDC22O60826 627 aa2.64□□□□□ -1.99
SQLE-204ENST00000520493 GCM2O75603 506 aaPredicted RBP2.64□□□□□ -1.99
SQLE-204ENST00000520493 MPZL1O95297 269 aa2.64□□□□□ -1.99
SQLE-204ENST00000520493 HLA-AP01891 365 aaKnown RBP2.64□□□□□ -1.99
SQLE-204ENST00000520493 MT-ND4P03905 459 aa2.64□□□□□ -1.99
SQLE-204ENST00000520493 KRT7P08729 469 aa2.64□□□□□ -1.99
SQLE-204ENST00000520493 MRPL3P09001 348 aaKnown RBP2.64□□□□□ -1.99
SQLE-204ENST00000520493 HIST1H1CP16403 213 aaKnown RBP2.64□□□□□ -1.99
SQLE-204ENST00000520493 PSMB9P28065 219 aa2.64□□□□□ -1.99
SQLE-204ENST00000520493 PRSS3P35030 304 aa2.64□□□□□ -1.99
SQLE-204ENST00000520493 CDC34P49427 236 aaPredicted RBP2.64□□□□□ -1.99
SQLE-204ENST00000520493 MYL6P60660 151 aa2.64□□□□□ -1.99
SQLE-204ENST00000520493 RAB8AP61006 207 aa2.64□□□□□ -1.99
SQLE-204ENST00000520493 CDK5Q00535 292 aa2.64□□□□□ -1.99
SQLE-204ENST00000520493 UBE2SQ16763 222 aa2.64□□□□□ -1.99
SQLE-204ENST00000520493 SLC36A2Q495M3 483 aa2.64□□□□□ -1.99
SQLE-204ENST00000520493 CLEC12AQ5QGZ9 265 aa2.64□□□□□ -1.99
SQLE-204ENST00000520493 LAMTOR1Q6IAA8 161 aa2.64□□□□□ -1.99
SQLE-204ENST00000520493 FAM45BPQ6NSW5 357 aa2.64□□□□□ -1.99
SQLE-204ENST00000520493 TMEM205Q6UW68 189 aa2.64□□□□□ -1.99
SQLE-204ENST00000520493 CLEC19AQ6UXS0 136 aa2.64□□□□□ -1.99
SQLE-204ENST00000520493 USP50Q70EL3 339 aaPredicted RBP2.64□□□□□ -1.99
SQLE-204ENST00000520493 DRAM1Q8N682 238 aa2.64□□□□□ -1.99
SQLE-204ENST00000520493 OR1J4Q8NGS1 313 aa2.64□□□□□ -1.99
SQLE-204ENST00000520493 OR13G1Q8NGZ3 307 aa2.64□□□□□ -1.99
SQLE-204ENST00000520493 COQ8AQ8NI60 647 aa2.64□□□□□ -1.99
SQLE-204ENST00000520493 ACTL9Q8TC94 416 aa2.64□□□□□ -1.99
SQLE-204ENST00000520493 BLNKQ8WV28 456 aa2.64□□□□□ -1.99
SQLE-204ENST00000520493 MRAP2Q96G30 205 aa2.64□□□□□ -1.99
SQLE-204ENST00000520493 BMFQ96LC9 184 aa2.64□□□□□ -1.99
SQLE-204ENST00000520493 SPANXB1Q9NS25 103 aaPredicted RBP2.64□□□□□ -1.99
SQLE-204ENST00000520493 PLEKHJ1Q9NW61 149 aa2.64□□□□□ -1.99
SQLE-204ENST00000520493 COMMD9Q9P000 198 aa2.64□□□□□ -1.99
SQLE-204ENST00000520493 PSG11Q9UQ72 335 aa2.64□□□□□ -1.99
SQLE-204ENST00000520493 CBY1Q9Y3M2 126 aa2.64□□□□□ -1.99
SQLE-204ENST00000520493 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.63□□□□□ -1.99
SQLE-204ENST00000520493 OR2AT4A6NND4 320 aa2.63□□□□□ -1.99
SQLE-204ENST00000520493 UPK1AO00322 258 aa2.63□□□□□ -1.99
SQLE-204ENST00000520493 BPY2O14599 106 aa2.63□□□□□ -1.99
SQLE-204ENST00000520493 PHYHO14832 338 aa2.63□□□□□ -1.99
SQLE-204ENST00000520493 ADAP1O75689 374 aa2.63□□□□□ -1.99
SQLE-204ENST00000520493 OCM2P0CE71 109 aa2.63□□□□□ -1.99
SQLE-204ENST00000520493 PSKH1P11801 424 aa2.63□□□□□ -1.99
SQLE-204ENST00000520493 TSPOP30536 169 aa2.63□□□□□ -1.99
SQLE-204ENST00000520493 RPS10P46783 165 aaKnown RBP2.63□□□□□ -1.99
SQLE-204ENST00000520493 SLC18A1P54219 525 aa2.63□□□□□ -1.99
SQLE-204ENST00000520493 RAP1AP62834 184 aa2.63□□□□□ -1.99
SQLE-204ENST00000520493 CKAP4Q07065 602 aaKnown RBP2.63□□□□□ -1.99
SQLE-204ENST00000520493 BNIP2Q12982 314 aa2.63□□□□□ -1.99
SQLE-204ENST00000520493 ATP6AP1LQ52LC2 224 aa2.63□□□□□ -1.99
SQLE-204ENST00000520493 MPV17L2Q567V2 206 aa2.63□□□□□ -1.99
SQLE-204ENST00000520493 DRAM2Q6UX65 266 aa2.63□□□□□ -1.99
SQLE-204ENST00000520493 Q6ZSR6 202 aa2.63□□□□□ -1.99
SQLE-204ENST00000520493 CALHM1Q8IU99 346 aa2.63□□□□□ -1.99
SQLE-204ENST00000520493 CPNE4Q96A23 557 aaPredicted RBP2.63□□□□□ -1.99
SQLE-204ENST00000520493 TMEM159Q96B96 161 aa2.63□□□□□ -1.99
SQLE-204ENST00000520493 DDIT4LQ96D03 193 aa2.63□□□□□ -1.99
SQLE-204ENST00000520493 FAM210AQ96ND0 272 aa2.63□□□□□ -1.99
SQLE-204ENST00000520493 QKIQ96PU8 341 aaKnown RBP eCLIP2.63□□□□□ -1.994e-7■■■□□ 14.6
SQLE-204ENST00000520493 RBBP8Q99708 897 aa2.63□□□□□ -1.99
SQLE-204ENST00000520493 GGTLC1Q9BX51 225 aa2.63□□□□□ -1.99
SQLE-204ENST00000520493 UGT2B28Q9BY64 529 aa2.63□□□□□ -1.99
SQLE-204ENST00000520493 API5Q9BZZ5 524 aaKnown RBP2.63□□□□□ -1.99
SQLE-204ENST00000520493 OR52D1Q9H346 318 aa2.63□□□□□ -1.99
SQLE-204ENST00000520493 DHX35Q9H5Z1 703 aaKnown RBP2.63□□□□□ -1.99
SQLE-204ENST00000520493 EXOSC4Q9NPD3 245 aaKnown RBP2.63□□□□□ -1.99
SQLE-204ENST00000520493 LHX9Q9NQ69 397 aa2.63□□□□□ -1.99
SQLE-204ENST00000520493 CHD8Q9HCK8 2581 aa2.63□□□□□ -1.99
SQLE-204ENST00000520493 CCL15-CCL14A0A0B4J2E2 113 aa2.62□□□□□ -1.99
SQLE-204ENST00000520493 NDUFC2-KCTD14E9PQ53 114 aa2.62□□□□□ -1.99
SQLE-204ENST00000520493 M0R1X1 148 aa2.62□□□□□ -1.99
SQLE-204ENST00000520493 CHST10O43529 356 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms