RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 TMEM50BP56557 158 aa12.86□□□□□ -0.35
TRAPPC9-205ENST00000518839 FGF12P61328 243 aa12.86□□□□□ -0.35
TRAPPC9-205ENST00000518839 GUCA2AQ02747 115 aa12.86□□□□□ -0.35
TRAPPC9-205ENST00000518839 HAGHLQ6PII5 290 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC9-205ENST00000518839 TRAPPC6BQ86SZ2 158 aa12.86□□□□□ -0.35
TRAPPC9-205ENST00000518839 LINC00596Q86U02 117 aa12.86□□□□□ -0.35
TRAPPC9-205ENST00000518839 FJX1Q86VR8 437 aa12.86□□□□□ -0.35
TRAPPC9-205ENST00000518839 Q8IYB0 196 aa12.86□□□□□ -0.35
TRAPPC9-205ENST00000518839 DVL3Q92997 716 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC9-205ENST00000518839 CREB3L1Q96BA8 519 aa12.86□□□□□ -0.35
TRAPPC9-205ENST00000518839 RADILQ96JH8 1075 aa12.86□□□□□ -0.35
TRAPPC9-205ENST00000518839 NEDD4LQ96PU5 975 aa12.86□□□□□ -0.35
TRAPPC9-205ENST00000518839 IFT46Q9NQC8 304 aa12.86□□□□□ -0.35
TRAPPC9-205ENST00000518839 A0A1B0GWJ7 208 aa12.85□□□□□ -0.35
TRAPPC9-205ENST00000518839 FUOMA2VDF0 154 aa12.85□□□□□ -0.35
TRAPPC9-205ENST00000518839 WIPF3A6NGB9 483 aa12.85□□□□□ -0.35
TRAPPC9-205ENST00000518839 VSTM5A8MXK1 200 aa12.85□□□□□ -0.35
TRAPPC9-205ENST00000518839 SFTPBP07988 381 aa12.85□□□□□ -0.35
TRAPPC9-205ENST00000518839 TBPP20226 339 aa12.85□□□□□ -0.35
TRAPPC9-205ENST00000518839 GABRR1P24046 479 aa12.85□□□□□ -0.35
TRAPPC9-205ENST00000518839 PMELP40967 661 aa12.85□□□□□ -0.35
TRAPPC9-205ENST00000518839 RBM11P57052 281 aaKnown RBP12.85□□□□□ -0.35
TRAPPC9-205ENST00000518839 KLF3P57682 345 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC9-205ENST00000518839 ADORA2A-AS1P86434 159 aa12.85□□□□□ -0.35
TRAPPC9-205ENST00000518839 SORDQ00796 357 aa12.85□□□□□ -0.35
TRAPPC9-205ENST00000518839 ARFRP1Q13795 201 aa12.85□□□□□ -0.35
TRAPPC9-205ENST00000518839 MPV17LQ2QL34 196 aa12.85□□□□□ -0.35
TRAPPC9-205ENST00000518839 ALKBH6Q3KRA9 238 aa12.85□□□□□ -0.35
TRAPPC9-205ENST00000518839 PLA1AQ53H76 456 aa12.85□□□□□ -0.35
TRAPPC9-205ENST00000518839 PLAC9Q5JTB6 97 aa12.85□□□□□ -0.35
TRAPPC9-205ENST00000518839 FBXL14Q8N1E6 418 aa12.85□□□□□ -0.35
TRAPPC9-205ENST00000518839 GALNT11Q8NCW6 608 aa12.85□□□□□ -0.35
TRAPPC9-205ENST00000518839 SLAMF9Q96A28 289 aa12.85□□□□□ -0.35
TRAPPC9-205ENST00000518839 ARHGAP5-AS1Q96IT6 56 aa12.85□□□□□ -0.35
TRAPPC9-205ENST00000518839 CACNG6Q9BXT2 260 aa12.85□□□□□ -0.35
TRAPPC9-205ENST00000518839 PECRQ9BY49 303 aa12.85□□□□□ -0.35
TRAPPC9-205ENST00000518839 ZMAT3Q9HA38 289 aaKnown RBP12.85□□□□□ -0.35
TRAPPC9-205ENST00000518839 NLKQ9UBE8 527 aa12.85□□□□□ -0.35
TRAPPC9-205ENST00000518839 NDRG3Q9UGV2 375 aa12.85□□□□□ -0.35
TRAPPC9-205ENST00000518839 ERRFI1Q9UJM3 462 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC9-205ENST00000518839 ST3GAL6Q9Y274 331 aa12.85□□□□□ -0.35
TRAPPC9-205ENST00000518839 NUBP2Q9Y5Y2 271 aa12.85□□□□□ -0.35
TRAPPC9-205ENST00000518839 SPTA1P02549 2419 aa12.84□□□□□ -0.35
TRAPPC9-205ENST00000518839 CHD8Q9HCK8 2581 aa12.84□□□□□ -0.35
TRAPPC9-205ENST00000518839 PRR14LQ5THK1 2151 aa12.84□□□□□ -0.35
TRAPPC9-205ENST00000518839 IGLV3-9A0A075B6K5 115 aa12.84□□□□□ -0.35
TRAPPC9-205ENST00000518839 FAM90A27PA6NNH2 459 aa12.84□□□□□ -0.35
TRAPPC9-205ENST00000518839 ATP6V1G2-DDX39BF2Z307 99 aa12.84□□□□□ -0.35
TRAPPC9-205ENST00000518839 PFDN1O60925 122 aa12.84□□□□□ -0.35
TRAPPC9-205ENST00000518839 MT-ND4P03905 459 aa12.84□□□□□ -0.35
TRAPPC9-205ENST00000518839 THBDP07204 575 aa12.84□□□□□ -0.35
TRAPPC9-205ENST00000518839 ACAA1P09110 424 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC9-205ENST00000518839 BCL3P20749 454 aa12.84□□□□□ -0.35
TRAPPC9-205ENST00000518839 BTCP35070 178 aa12.84□□□□□ -0.35
TRAPPC9-205ENST00000518839 BTG1P62324 171 aa12.84□□□□□ -0.35
TRAPPC9-205ENST00000518839 IL13RA2Q14627 380 aa12.84□□□□□ -0.35
TRAPPC9-205ENST00000518839 MEF2DQ14814 521 aa12.84□□□□□ -0.35
TRAPPC9-205ENST00000518839 TAF9Q16594 264 aa12.84□□□□□ -0.35
TRAPPC9-205ENST00000518839 RSBN1Q5VWQ0 802 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC9-205ENST00000518839 STEAP1BQ6NZ63 245 aa12.84□□□□□ -0.35
TRAPPC9-205ENST00000518839 CA5BP1Q8WTZ4 195 aa12.84□□□□□ -0.35
TRAPPC9-205ENST00000518839 TMEM171Q8WVE6 324 aa12.84□□□□□ -0.35
TRAPPC9-205ENST00000518839 ST8SIA4Q92187 359 aa12.84□□□□□ -0.35
TRAPPC9-205ENST00000518839 PPP1R14BQ96C90 147 aa12.84□□□□□ -0.35
TRAPPC9-205ENST00000518839 MARVELD1Q9BSK0 173 aa12.84□□□□□ -0.35
TRAPPC9-205ENST00000518839 MMP28Q9H239 520 aa12.84□□□□□ -0.35
TRAPPC9-205ENST00000518839 ESRP2Q9H6T0 727 aaKnown RBP12.84□□□□□ -0.35
TRAPPC9-205ENST00000518839 ZNF442Q9H7R0 627 aa12.84□□□□□ -0.35
TRAPPC9-205ENST00000518839 PLEKHJ1Q9NW61 149 aa12.84□□□□□ -0.35
TRAPPC9-205ENST00000518839 PRRC2CQ9Y520 2896 aaKnown RBP12.83□□□□□ -0.35
TRAPPC9-205ENST00000518839 MEIS3P1A6NDR6 274 aa12.83□□□□□ -0.36
TRAPPC9-205ENST00000518839 ZNF736B4DX44 427 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC9-205ENST00000518839 SYNGR1O43759 233 aa12.83□□□□□ -0.36
TRAPPC9-205ENST00000518839 PDCD6O75340 191 aa12.83□□□□□ -0.36
TRAPPC9-205ENST00000518839 GIFP27352 417 aa12.83□□□□□ -0.36
TRAPPC9-205ENST00000518839 CHATP28329 748 aa12.83□□□□□ -0.36
TRAPPC9-205ENST00000518839 RAG2P55895 527 aa12.83□□□□□ -0.36
TRAPPC9-205ENST00000518839 MRPS15P82914 257 aaKnown RBP12.83□□□□□ -0.36
TRAPPC9-205ENST00000518839 ACTBL2Q562R1 376 aa12.83□□□□□ -0.36
TRAPPC9-205ENST00000518839 TMEM255AQ5JRV8 349 aa12.83□□□□□ -0.36
TRAPPC9-205ENST00000518839 C22orf34Q6ZV56 151 aa12.83□□□□□ -0.36
TRAPPC9-205ENST00000518839 CELF2-AS1Q8N7Q2 184 aa12.83□□□□□ -0.36
TRAPPC9-205ENST00000518839 SCCPDHQ8NBX0 429 aa12.83□□□□□ -0.36
TRAPPC9-205ENST00000518839 NUDCD2Q8WVJ2 157 aa12.83□□□□□ -0.36
TRAPPC9-205ENST00000518839 WFIKKN1Q96NZ8 548 aa12.83□□□□□ -0.36
TRAPPC9-205ENST00000518839 OCSTAMPQ9BR26 566 aa12.83□□□□□ -0.36
TRAPPC9-205ENST00000518839 SPACA1Q9HBV2 294 aa12.83□□□□□ -0.36
TRAPPC9-205ENST00000518839 KCNJ16Q9NPI9 418 aa12.83□□□□□ -0.36
TRAPPC9-205ENST00000518839 MTCH1Q9NZJ7 389 aa12.83□□□□□ -0.36
TRAPPC9-205ENST00000518839 DUSP13Q9UII6 198 aa12.83□□□□□ -0.36
TRAPPC9-205ENST00000518839 ANAPC10Q9UM13 185 aa12.83□□□□□ -0.36
TRAPPC9-205ENST00000518839 PCNX1Q96RV3 2341 aa12.82□□□□□ -0.36
TRAPPC9-205ENST00000518839 PLSCR5A0PG75 271 aa12.82□□□□□ -0.36
TRAPPC9-205ENST00000518839 DPRXA6NFQ7 191 aa12.82□□□□□ -0.36
TRAPPC9-205ENST00000518839 INMT-MINDY4F8WBC2 141 aa12.82□□□□□ -0.36
TRAPPC9-205ENST00000518839 ABCD4O14678 606 aa12.82□□□□□ -0.36
TRAPPC9-205ENST00000518839 GEMIN2O14893 280 aaKnown RBP12.82□□□□□ -0.36
TRAPPC9-205ENST00000518839 ATXN7O15265 892 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC9-205ENST00000518839 MLNRO43193 412 aa12.82□□□□□ -0.36
TRAPPC9-205ENST00000518839 RAB3DO95716 219 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 155 ms