RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 FAM71AQ8IYT1 594 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 NATD1Q8N6N6 113 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 DCAF4L2Q8NA75 395 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 HSD17B11Q8NBQ5 300 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 OR56A4Q8NGH8 313 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 OR10A6Q8NH74 314 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 NEIL3Q8TAT5 605 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 SYNPRQ8TBG9 265 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 SFXN5Q8TD22 340 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 SKA2Q8WVK7 121 aaPredicted RBP2.43□□□□□ -2.02
VPS13B-207ENST00000518569 SMIM19Q96E16 107 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 YIPF6Q96EC8 236 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 SMIM12Q96EX1 92 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 ZNF75AQ96N20 296 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 LINC00167Q96N53 147 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 ZNF285Q96NJ3 590 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 HBEGFQ99075 208 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 SDHCQ99643 169 aaPredicted RBP2.43□□□□□ -2.02
VPS13B-207ENST00000518569 NRTNQ99748 197 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 NAA50Q9GZZ1 169 aaKnown RBP2.43□□□□□ -2.02
VPS13B-207ENST00000518569 BOLA2Q9H3K6 86 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 ZNF430Q9H8G1 570 aaPredicted RBP2.43□□□□□ -2.02
VPS13B-207ENST00000518569 TMEM27Q9HBJ8 222 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 EXOSC4Q9NPD3 245 aaKnown RBP2.43□□□□□ -2.02
VPS13B-207ENST00000518569 DAZ3Q9NR90 486 aaKnown RBP2.43□□□□□ -2.02
VPS13B-207ENST00000518569 INIPQ9NRY2 104 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 HRASLS2Q9NWW9 162 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 GLTPQ9NZD2 209 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 SMPXQ9UHP9 88 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 ZNF391Q9UJN7 358 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 AK6Q9Y3D8 172 aaKnown RBP2.43□□□□□ -2.02
VPS13B-207ENST00000518569 NEUROG3Q9Y4Z2 214 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 HSPB11Q9Y547 144 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 OR51B4Q9Y5P0 310 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 NUBP2Q9Y5Y2 271 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 RALGAPBQ86X10 1494 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 TOPAZ1Q8N9V7 1692 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 AKAP12Q02952 1782 aa2.43□□□□□ -2.02
VPS13B-207ENST00000518569 ZBED9Q6R2W3 1325 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 SETD5Q9C0A6 1442 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 XRN1Q8IZH2 1706 aaKnown RBP2.42□□□□□ -2.02
VPS13B-207ENST00000518569 FLT4P35916 1363 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 TRAV8-7A0A075B6U6 113 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 A0A0A6YYD5 115 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 A0A0G2JRQ6 117 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 KIR2DS1A0A191URI9 304 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 METTL15A6NJ78 407 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 ZNF98A6NK75 572 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 OR11H12B2RN74 326 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 DISC1C4P0D8 188 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 F8W036 122 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 CDC7O00311 574 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 NUPL2O15504 423 aaKnown RBP2.42□□□□□ -2.02
VPS13B-207ENST00000518569 CXCL13O43927 109 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 RAD1O60671 282 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 ZNF780AO75290 641 aaPredicted RBP2.42□□□□□ -2.02
VPS13B-207ENST00000518569 CD160O95971 181 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 PPBPP02775 128 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 CD74P04233 296 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 LGALS2P05162 132 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 FAM228BP0C875 321 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 KCNE1P15382 129 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 UGT2B7P16662 529 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 MYL12AP19105 171 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 OGNP20774 298 aaKnown RBP2.42□□□□□ -2.02
VPS13B-207ENST00000518569 PSMA1P25786 263 aaKnown RBP2.42□□□□□ -2.02
VPS13B-207ENST00000518569 S100PP25815 95 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 MPIP34949 423 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 RCVRNP35243 200 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 RFC3P40938 356 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 OPRD1P41143 372 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 YAP1P46937 504 aaKnown RBP2.42□□□□□ -2.02
VPS13B-207ENST00000518569 CSNK1A1P48729 337 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 STC1P52823 247 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 TCTAP57738 103 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 CDC42P60953 191 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 RAB8AP61006 207 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 STXBP1P61764 594 aaKnown RBP2.42□□□□□ -2.02
VPS13B-207ENST00000518569 RPS15AP62244 130 aaKnown RBP2.42□□□□□ -2.02
VPS13B-207ENST00000518569 PRKCDQ05655 676 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 ST3GAL4Q11206 333 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 AQP6Q13520 282 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 TFDP2Q14188 446 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 KIR2DS1Q14954 304 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 MPPED2Q15777 294 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 HIST3H3Q16695 136 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 TRMT5Q32P41 509 aaKnown RBP2.42□□□□□ -2.02
VPS13B-207ENST00000518569 LIN52Q52LA3 116 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 ACTL10Q5JWF8 245 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 RPL13AP3Q6NVV1 102 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 ZFP1Q6P2D0 407 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 DHRS4L2Q6PKH6 230 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 SMARCD3Q6STE5 483 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 IGFL2Q6UWQ7 119 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 C5orf46Q6UWT4 87 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 NPSR1Q6W5P4 371 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 CYHR1Q6ZMK1 362 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 Q6ZVH6 145 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 MBOAT2Q6ZWT7 520 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 NIT1Q86X76 327 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms