RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 C1orf196B1AJZ1 125 aa15.99■□□□□ 0.15
SDC2-202ENST00000518385 H3BSH0 61 aa15.99■□□□□ 0.15
SDC2-202ENST00000518385 TRAPPC6AO75865 159 aa15.99■□□□□ 0.15
SDC2-202ENST00000518385 RFPL3SP0C7P2 107 aa15.99■□□□□ 0.15
SDC2-202ENST00000518385 MSR1P21757 451 aa15.99■□□□□ 0.15
SDC2-202ENST00000518385 CCL1P22362 96 aa15.99■□□□□ 0.15
SDC2-202ENST00000518385 GNALP38405 381 aa15.99■□□□□ 0.15
SDC2-202ENST00000518385 ALDH3B1P43353 468 aa15.99■□□□□ 0.15
SDC2-202ENST00000518385 ZNF84P51523 738 aa15.99■□□□□ 0.15
SDC2-202ENST00000518385 GFRA1P56159 465 aa15.99■□□□□ 0.15
SDC2-202ENST00000518385 GRB2P62993 217 aaKnown RBP15.99■□□□□ 0.15
SDC2-202ENST00000518385 SWI5Q1ZZU3 235 aa15.99■□□□□ 0.15
SDC2-202ENST00000518385 FAM76BQ5HYJ3 339 aa15.99■□□□□ 0.15
SDC2-202ENST00000518385 OR10K2Q6IF99 312 aa15.99■□□□□ 0.15
SDC2-202ENST00000518385 LYPD6BQ8NI32 183 aa15.99■□□□□ 0.15
SDC2-202ENST00000518385 ZMAT3Q9HA38 289 aaKnown RBP15.99■□□□□ 0.15
SDC2-202ENST00000518385 ACKR4Q9NPB9 350 aa15.99■□□□□ 0.15
SDC2-202ENST00000518385 ZMAT5Q9UDW3 170 aaKnown RBP15.99■□□□□ 0.15
SDC2-202ENST00000518385 FOXD3Q9UJU5 478 aaPredicted RBP15.99■□□□□ 0.15
SDC2-202ENST00000518385 SMAD9O15198 467 aaKnown RBP15.98■□□□□ 0.15
SDC2-202ENST00000518385 DHHO43323 396 aa15.98■□□□□ 0.15
SDC2-202ENST00000518385 CRYBA1P05813 215 aa15.98■□□□□ 0.15
SDC2-202ENST00000518385 FAM3AP98173 230 aa15.98■□□□□ 0.15
SDC2-202ENST00000518385 MFAP5Q13361 173 aa15.98■□□□□ 0.15
SDC2-202ENST00000518385 SMCO1Q147U7 214 aa15.98■□□□□ 0.15
SDC2-202ENST00000518385 OR1C1Q15619 314 aa15.98■□□□□ 0.15
SDC2-202ENST00000518385 GFOD2Q3B7J2 385 aa15.98■□□□□ 0.15
SDC2-202ENST00000518385 SPINK14Q6IE38 97 aa15.98■□□□□ 0.15
SDC2-202ENST00000518385 OR52W1Q6IF63 320 aa15.98■□□□□ 0.15
SDC2-202ENST00000518385 TMEM88Q6PEY1 159 aa15.98■□□□□ 0.15
SDC2-202ENST00000518385 BTNL8Q6UX41 500 aa15.98■□□□□ 0.15
SDC2-202ENST00000518385 CLEC18BQ6UXF7 455 aa15.98■□□□□ 0.15
SDC2-202ENST00000518385 LINC00696Q6ZRV3 163 aa15.98■□□□□ 0.15
SDC2-202ENST00000518385 CBLN2Q8IUK8 224 aa15.98■□□□□ 0.15
SDC2-202ENST00000518385 GVQW1Q8N7I0 195 aa15.98■□□□□ 0.15
SDC2-202ENST00000518385 ZIC4Q8N9L1 334 aa15.98■□□□□ 0.15
SDC2-202ENST00000518385 OR52N4Q8NGI2 321 aa15.98■□□□□ 0.15
SDC2-202ENST00000518385 OR10S1Q8NGN2 331 aa15.98■□□□□ 0.15
SDC2-202ENST00000518385 CPNE4Q96A23 557 aaPredicted RBP15.98■□□□□ 0.15
SDC2-202ENST00000518385 UCN2Q96RP3 112 aa15.98■□□□□ 0.15
SDC2-202ENST00000518385 SRXN1Q9BYN0 137 aa15.98■□□□□ 0.15
SDC2-202ENST00000518385 C5orf66Q9H5L9 145 aa15.98■□□□□ 0.15
SDC2-202ENST00000518385 ESRP2Q9H6T0 727 aaKnown RBP15.98■□□□□ 0.15
SDC2-202ENST00000518385 PLEKHA2Q9HB19 425 aa15.98■□□□□ 0.15
SDC2-202ENST00000518385 C1orf123Q9NWV4 160 aa15.98■□□□□ 0.15
SDC2-202ENST00000518385 MRPS28Q9Y2Q9 187 aaKnown RBP15.98■□□□□ 0.15
SDC2-202ENST00000518385 H0YIZ8 118 aa15.97■□□□□ 0.15
SDC2-202ENST00000518385 F10P00742 488 aa15.97■□□□□ 0.15
SDC2-202ENST00000518385 PMP2P02689 132 aa15.97■□□□□ 0.15
SDC2-202ENST00000518385 KLK2P20151 261 aa15.97■□□□□ 0.15
SDC2-202ENST00000518385 PTAFRP25105 342 aa15.97■□□□□ 0.15
SDC2-202ENST00000518385 NPBWR1P48145 328 aa15.97■□□□□ 0.15
SDC2-202ENST00000518385 ECH1Q13011 328 aa15.97■□□□□ 0.15
SDC2-202ENST00000518385 WIPI1Q5MNZ9 446 aaPredicted RBP15.97■□□□□ 0.15
SDC2-202ENST00000518385 ABLIM2Q6H8Q1 611 aa15.97■□□□□ 0.15
SDC2-202ENST00000518385 ANGPTL5Q86XS5 388 aa15.97■□□□□ 0.15
SDC2-202ENST00000518385 ZNF561Q8N587 486 aa15.97■□□□□ 0.15
SDC2-202ENST00000518385 GJC3Q8NFK1 279 aa15.97■□□□□ 0.15
SDC2-202ENST00000518385 RXFP4Q8TDU9 374 aa15.97■□□□□ 0.15
SDC2-202ENST00000518385 TMEM230Q96A57 120 aa15.97■□□□□ 0.15
SDC2-202ENST00000518385 ZNF385AQ96PM9 386 aaKnown RBP15.97■□□□□ 0.15
SDC2-202ENST00000518385 SIGLEC12Q96PQ1 595 aa15.97■□□□□ 0.15
SDC2-202ENST00000518385 SMDT1Q9H4I9 107 aa15.97■□□□□ 0.15
SDC2-202ENST00000518385 ZNF552Q9H707 407 aaPredicted RBP15.97■□□□□ 0.15
SDC2-202ENST00000518385 FN3KRPQ9HA64 309 aa15.97■□□□□ 0.15
SDC2-202ENST00000518385 TAF9BQ9HBM6 251 aa15.97■□□□□ 0.15
SDC2-202ENST00000518385 PLA2G3Q9NZ20 509 aa15.97■□□□□ 0.15
SDC2-202ENST00000518385 OSGIN2Q9Y236 505 aa15.97■□□□□ 0.15
SDC2-202ENST00000518385 KLF13Q9Y2Y9 288 aaPredicted RBP15.97■□□□□ 0.15
SDC2-202ENST00000518385 SERPINE3A8MV23 424 aa15.96■□□□□ 0.15
SDC2-202ENST00000518385 RRP8O43159 456 aaKnown RBP15.96■□□□□ 0.15
SDC2-202ENST00000518385 KLK10O43240 276 aa15.96■□□□□ 0.15
SDC2-202ENST00000518385 MT-ND4LP03901 98 aa15.96■□□□□ 0.15
SDC2-202ENST00000518385 FCGR3AP08637 254 aa15.96■□□□□ 0.15
SDC2-202ENST00000518385 SPP1P10451 314 aa15.96■□□□□ 0.15
SDC2-202ENST00000518385 GNB3P16520 340 aa15.96■□□□□ 0.15
SDC2-202ENST00000518385 OR3A2P47893 321 aa15.96■□□□□ 0.15
SDC2-202ENST00000518385 RAB5CP51148 216 aa15.96■□□□□ 0.15
SDC2-202ENST00000518385 ARHGDIBP52566 201 aa15.96■□□□□ 0.15
SDC2-202ENST00000518385 MRPS34P82930 218 aaKnown RBP15.96■□□□□ 0.15
SDC2-202ENST00000518385 HYAL4Q2M3T9 481 aa15.96■□□□□ 0.15
SDC2-202ENST00000518385 ZNF101Q8IZC7 436 aa15.96■□□□□ 0.15
SDC2-202ENST00000518385 FAM89BQ8N5H3 189 aa15.96■□□□□ 0.15
SDC2-202ENST00000518385 RRNAD1Q96FB5 475 aaKnown RBP15.96■□□□□ 0.15
SDC2-202ENST00000518385 TMEM59Q9BXS4 323 aa15.96■□□□□ 0.15
SDC2-202ENST00000518385 ZNF703Q9H7S9 590 aaPredicted RBP15.96■□□□□ 0.15
SDC2-202ENST00000518385 METTL8Q9H825 291 aaKnown RBP15.96■□□□□ 0.15
SDC2-202ENST00000518385 C14orf166Q9Y224 244 aaKnown RBP15.96■□□□□ 0.15
SDC2-202ENST00000518385 TIMM10BQ9Y5J6 103 aa15.96■□□□□ 0.15
SDC2-202ENST00000518385 MEX3AA1L020 520 aaKnown RBP15.96■□□□□ 0.14
SDC2-202ENST00000518385 PINLYPA6NC86 204 aa15.96■□□□□ 0.14
SDC2-202ENST00000518385 ZNF716A6NP11 495 aa15.96■□□□□ 0.14
SDC2-202ENST00000518385 COLCA2A8K830 154 aa15.96■□□□□ 0.14
SDC2-202ENST00000518385 CDC14BO60729 498 aa15.96■□□□□ 0.14
SDC2-202ENST00000518385 MUC1P15941 1255 aaPredicted RBP15.96■□□□□ 0.14
SDC2-202ENST00000518385 CDAP32320 146 aa15.96■□□□□ 0.14
SDC2-202ENST00000518385 CCL11P51671 97 aa15.96■□□□□ 0.14
SDC2-202ENST00000518385 HIST1H3AP68431 136 aa15.96■□□□□ 0.14
SDC2-202ENST00000518385 DEFB109BQ30KR1 87 aa15.96■□□□□ 0.14
SDC2-202ENST00000518385 HIST2H3PS2Q5TEC6 136 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms