RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 COL10A1Q03692 680 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 ZNF92Q03936 586 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 ACVR1Q04771 509 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 AESQ08117 197 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 SRSF6Q13247 344 aaKnown RBP4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 ATXN7L3Q14CW9 347 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 TGIF1Q15583 401 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 OR7A5Q15622 319 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 ADIRFQ15847 76 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 ACKR1Q16570 336 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 C2orf68Q2NKX9 166 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 SLC25A35Q3KQZ1 300 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 CD300EQ496F6 205 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 LRRC37A5PQ49AS3 106 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 GGTA1PQ4G0N0 100 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 C5orf47Q569G3 176 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 CPTPQ5TA50 214 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 AADACL3Q5VUY0 350 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 IGFL4Q6B9Z1 124 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 DMKNQ6E0U4 476 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 FAAP20Q6NZ36 180 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 NIPAL3Q6P499 406 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 ARL9Q6T311 187 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 PARS2Q7L3T8 475 aaKnown RBP4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 MOB1BQ7L9L4 216 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 MDGA2Q7Z553 956 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 CMTM1Q8IZ96 169 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 SYS1Q8N2H4 156 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 STPG4Q8N801 248 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 AMER3Q8N944 861 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 FER1L6-AS1Q8NA97 138 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 OR5AU1Q8NGC0 362 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 OR52L1Q8NGH7 329 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 OR5A1Q8NGJ0 315 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 OR10Q1Q8NGQ4 319 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 LGALS14Q8TCE9 139 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 GPR148Q8TDV2 347 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 PIGBQ92521 554 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 ZMYND19Q96E35 227 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 DYNLL2Q96FJ2 89 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 GPR21Q99679 349 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 NKX3-1Q99801 234 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 CITED1Q99966 193 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 HINT2Q9BX68 163 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 RAB11FIP5Q9BXF6 653 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 OR10A2Q9H208 303 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 OR2S2Q9NQN1 319 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 G6PC2Q9NQR9 355 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 SLC2A4RGQ9NR83 387 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 MRPL15Q9P015 296 aaKnown RBP4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 SLC23A2Q9UGH3 650 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 FZD1Q9UP38 647 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 COL5A2P05997 1499 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 BTAF1O14981 1849 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 ALPK3Q96L96 1907 aa4.23□□□□□ -1.73
HMGB1P19-201ENST00000517578 NHSQ6T4R5 1651 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 SIGLEC1Q9BZZ2 1709 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 TRAV9-1A0A075B6T8 112 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 IGKV6D-41A0A0C4DH26 115 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 TRBV7-9A0A0J9YWB2 115 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 A0A1B0GU03 582 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 C13orf42A0A1B0GVH6 325 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 TSPAN11A1L157 253 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 TMEM213A2RRL7 107 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 A6NDN8 102 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 GAGE10A6NGK3 116 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 OR51F1A6NGY5 319 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 ZNF860A6NHJ4 632 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 A6NIN4 97 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 HSD17B6O14756 317 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 TLX3O43711 291 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 CD5LO43866 347 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 GNG7O60262 68 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 GJB5O95377 273 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 CPSF4O95639 269 aaKnown RBP4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 NUDT3O95989 172 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 HAND1O96004 215 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 IFNA1P01562 189 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 HLA-HP01893 362 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 OPN1SWP03999 348 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 MMP2P08253 660 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 SMIM10L1P0DMW3 83 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 CEACAM1P13688 526 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 AZU1P20160 251 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 KITLGP21583 273 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 CDK2P24941 298 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 ELAVL4P26378 380 aaKnown RBP4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 DUSP1P28562 367 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 TFPI2P48307 235 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 GNG4P50150 75 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 MANFP55145 182 aaKnown RBP4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 RAB38P57729 211 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 LILRA4P59901 499 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 RUNX1Q01196 453 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 TMEM267Q0VDI3 215 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 GAGE5Q13069 117 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 GAGE6Q13070 117 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 FOXE3Q13461 319 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 ELOCQ15369 112 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 LTC4SQ16873 150 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms