RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 OR51D1Q8NGF3 324 aa3.23□□□□□ -1.89
CAST-242ENST00000515063 OR2T35Q8NGX2 323 aa3.23□□□□□ -1.89
CAST-242ENST00000515063 ST7LQ8TDW4 575 aa3.23□□□□□ -1.89
CAST-242ENST00000515063 DUSP19Q8WTR2 217 aa3.23□□□□□ -1.89
CAST-242ENST00000515063 RNF133Q8WVZ7 376 aa3.23□□□□□ -1.89
CAST-242ENST00000515063 TSEN15Q8WW01 171 aaKnown RBP3.23□□□□□ -1.89
CAST-242ENST00000515063 TSLPQ969D9 159 aa3.23□□□□□ -1.89
CAST-242ENST00000515063 PNPLA2Q96AD5 504 aa3.23□□□□□ -1.89
CAST-242ENST00000515063 FAHD2AQ96GK7 314 aa3.23□□□□□ -1.89
CAST-242ENST00000515063 TSSK2Q96PF2 358 aa3.23□□□□□ -1.89
CAST-242ENST00000515063 RBP7Q96R05 134 aa3.23□□□□□ -1.89
CAST-242ENST00000515063 GAL3ST4Q96RP7 486 aa3.23□□□□□ -1.89
CAST-242ENST00000515063 ABHD6Q9BV23 337 aa3.23□□□□□ -1.89
CAST-242ENST00000515063 EDEM2Q9BV94 578 aa3.23□□□□□ -1.89
CAST-242ENST00000515063 RTN4RQ9BZR6 473 aa3.23□□□□□ -1.89
CAST-242ENST00000515063 VN1R1Q9GZP7 353 aa3.23□□□□□ -1.89
CAST-242ENST00000515063 OR10A4Q9H209 315 aa3.23□□□□□ -1.89
CAST-242ENST00000515063 SLC26A1Q9H2B4 701 aa3.23□□□□□ -1.89
CAST-242ENST00000515063 METTL17Q9H7H0 456 aaPredicted RBP3.23□□□□□ -1.89
CAST-242ENST00000515063 APMAPQ9HDC9 416 aa3.23□□□□□ -1.89
CAST-242ENST00000515063 CHST11Q9NPF2 352 aa3.23□□□□□ -1.89
CAST-242ENST00000515063 PRMT8Q9NR22 394 aaPredicted RBP3.23□□□□□ -1.89
CAST-242ENST00000515063 MRPL15Q9P015 296 aaKnown RBP3.23□□□□□ -1.89
CAST-242ENST00000515063 MED11Q9P086 117 aa3.23□□□□□ -1.89
CAST-242ENST00000515063 DUX4Q9UBX2 424 aa3.23□□□□□ -1.89
CAST-242ENST00000515063 KLK11Q9UBX7 282 aa3.23□□□□□ -1.89
CAST-242ENST00000515063 C19orf25Q9UFG5 118 aaPredicted RBP3.23□□□□□ -1.89
CAST-242ENST00000515063 OR52A1Q9UKL2 312 aa3.23□□□□□ -1.89
CAST-242ENST00000515063 RALYQ9UKM9 306 aaKnown RBP3.23□□□□□ -1.89
CAST-242ENST00000515063 NUP50Q9UKX7 468 aa3.23□□□□□ -1.89
CAST-242ENST00000515063 CLEC4AQ9UMR7 237 aa3.23□□□□□ -1.89
CAST-242ENST00000515063 RPH3AQ9Y2J0 694 aaPredicted RBP3.23□□□□□ -1.89
CAST-242ENST00000515063 SPTBP11277 2137 aa3.23□□□□□ -1.89
CAST-242ENST00000515063 FER1L5A0AVI2 2057 aa3.23□□□□□ -1.89
CAST-242ENST00000515063 PCNX3Q9H6A9 2034 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 TNRC6BQ9UPQ9 1833 aaKnown RBP3.22□□□□□ -1.89
CAST-242ENST00000515063 TRAV18A0A075B6X5 111 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 A0A0B4J2A0 478 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 A0A0D9SG52 128 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 A6NL46 340 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 RFPL4AA6NLU0 287 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 A8MUA0 341 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 DISC1C4P0D8 188 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 FAM90A26D6RGX4 464 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 NPIPA5E9PKD4 350 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 C11orf98E9PRG8 122 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 F5H5P2 479 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 RFPL4AL1F8VTS6 287 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 SMLR1H3BR10 107 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 L7N2F9 121 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 CA11O75493 328 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 B3GALNT1O75752 331 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 ZFAND5O76080 213 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 RAB3DO95716 219 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 CRYZL1O95825 349 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 NUDT14O95848 222 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 CD8AP01732 235 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 MAS1P04201 325 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 HEXBP07686 556 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 UBBP0CG47 229 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 GIMD1P0DJR0 217 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 SLC25A4P12235 298 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 GTF2F2P13984 249 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 FOLR1P15328 257 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 FOSL2P15408 326 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 RPA2P15927 270 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 CTLA4P16410 223 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 HOXA6P31267 233 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 S100A11P31949 105 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 EIF1P41567 113 aaKnown RBP3.22□□□□□ -1.89
CAST-242ENST00000515063 MAGEB1P43366 347 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 DNASE1L1P49184 302 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 ZNF133P52736 654 aaPredicted RBP3.22□□□□□ -1.89
CAST-242ENST00000515063 EMP2P54851 167 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 CLDN12P56749 244 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 OR1D5P58170 312 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 TSPAN5P62079 268 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 SNRPD2P62316 118 aaKnown RBP3.22□□□□□ -1.89
CAST-242ENST00000515063 GAGE2BQ13066 116 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 EXOSC2Q13868 293 aaKnown RBP3.22□□□□□ -1.89
CAST-242ENST00000515063 GK2Q14410 553 aaPredicted RBP3.22□□□□□ -1.89
CAST-242ENST00000515063 ZNF345Q14585 488 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 ARL6IP1Q15041 203 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 GAGE2EQ4V326 116 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 ACTBL2Q562R1 376 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 VWA2Q5GFL6 755 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 TMEM255AQ5JRV8 349 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 NHLRC3Q5JS37 347 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 RTL6Q6ICC9 239 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 KRTAP5-11Q6L8G4 156 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 GAGE2AQ6NT46 116 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 SLC25A47Q6Q0C1 308 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 C3P1Q6ZMU1 363 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 RFPL4BQ6ZWI9 263 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 PGAP1Q75T13 922 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 SLC35D2Q76EJ3 337 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 OR2W3Q7Z3T1 314 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 ANKRD37Q7Z713 158 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 SLC51BQ86UW2 128 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms