RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 MORN4Q8NDC4 146 aa11.88□□□□□ -0.51
TCOF1-214ENST00000515035 CLDN23Q96B33 292 aa11.88□□□□□ -0.51
TCOF1-214ENST00000515035 KIAA1456Q9P272 454 aa11.88□□□□□ -0.51
TCOF1-214ENST00000515035 M0R1X1 148 aa11.88□□□□□ -0.51
TCOF1-214ENST00000515035 GATCO43716 136 aaKnown RBP11.88□□□□□ -0.51
TCOF1-214ENST00000515035 FAM157BP0CG42 384 aa11.88□□□□□ -0.51
TCOF1-214ENST00000515035 HTR1DP28221 377 aa11.88□□□□□ -0.51
TCOF1-214ENST00000515035 C1orf53Q5VUE5 145 aa11.88□□□□□ -0.51
TCOF1-214ENST00000515035 PET117Q6UWS5 81 aa11.88□□□□□ -0.51
TCOF1-214ENST00000515035 MRGPREQ86SM8 312 aa11.88□□□□□ -0.51
TCOF1-214ENST00000515035 POM121L2Q96KW2 1035 aa11.88□□□□□ -0.51
TCOF1-214ENST00000515035 MIXL1Q9H2W2 232 aa11.88□□□□□ -0.51
TCOF1-214ENST00000515035 MMP25Q9NPA2 562 aa11.88□□□□□ -0.51
TCOF1-214ENST00000515035 RP1P56715 2156 aa11.87□□□□□ -0.51
TCOF1-214ENST00000515035 IGHV3-15A0A0B4J1V0 119 aa11.87□□□□□ -0.51
TCOF1-214ENST00000515035 LINC01565O15544 149 aa11.87□□□□□ -0.51
TCOF1-214ENST00000515035 TBX19O60806 448 aa11.87□□□□□ -0.51
TCOF1-214ENST00000515035 RPS23P62266 143 aaKnown RBP11.87□□□□□ -0.51
TCOF1-214ENST00000515035 TUSC1Q2TAM9 212 aa11.87□□□□□ -0.51
TCOF1-214ENST00000515035 DDX60LQ5H9U9 1706 aaKnown RBP11.87□□□□□ -0.51
TCOF1-214ENST00000515035 PAPPAQ13219 1627 aa11.87□□□□□ -0.51
TCOF1-214ENST00000515035 C3orf85A0A1B0GTC6 90 aa11.87□□□□□ -0.51
TCOF1-214ENST00000515035 A0A1B0GTH9 108 aa11.87□□□□□ -0.51
TCOF1-214ENST00000515035 H0YIG0 161 aa11.87□□□□□ -0.51
TCOF1-214ENST00000515035 PRSS23O95084 383 aa11.87□□□□□ -0.51
TCOF1-214ENST00000515035 OR5AC1P0C628 307 aa11.87□□□□□ -0.51
TCOF1-214ENST00000515035 FAM87AP0C7U9 286 aa11.87□□□□□ -0.51
TCOF1-214ENST00000515035 CAMPP49913 170 aa11.87□□□□□ -0.51
TCOF1-214ENST00000515035 CD300LDQ6UXZ3 194 aa11.87□□□□□ -0.51
TCOF1-214ENST00000515035 NUFIP2Q7Z417 695 aaKnown RBP11.87□□□□□ -0.51
TCOF1-214ENST00000515035 WBP2Q969T9 261 aa11.87□□□□□ -0.51
TCOF1-214ENST00000515035 GSTZ1O43708 216 aaPredicted RBP11.87□□□□□ -0.51
TCOF1-214ENST00000515035 BMP5P22003 454 aa11.87□□□□□ -0.51
TCOF1-214ENST00000515035 PPOXP50336 477 aa11.87□□□□□ -0.51
TCOF1-214ENST00000515035 FOXF1Q12946 379 aa11.87□□□□□ -0.51
TCOF1-214ENST00000515035 PDCD1Q15116 288 aa11.87□□□□□ -0.51
TCOF1-214ENST00000515035 FAHD2BQ6P2I3 314 aaPredicted RBP11.87□□□□□ -0.51
TCOF1-214ENST00000515035 C20orf196Q8IYI0 205 aa11.87□□□□□ -0.51
TCOF1-214ENST00000515035 GVQW1Q8N7I0 195 aa11.87□□□□□ -0.51
TCOF1-214ENST00000515035 OR10G4Q8NGN3 311 aa11.87□□□□□ -0.51
TCOF1-214ENST00000515035 OR10G9Q8NGN4 311 aa11.87□□□□□ -0.51
TCOF1-214ENST00000515035 OR10G7Q8NGN6 311 aa11.87□□□□□ -0.51
TCOF1-214ENST00000515035 HMGCLL1Q8TB92 370 aa11.87□□□□□ -0.51
TCOF1-214ENST00000515035 FAHD2AQ96GK7 314 aa11.87□□□□□ -0.51
TCOF1-214ENST00000515035 MRGPRX1Q96LB2 322 aa11.87□□□□□ -0.51
TCOF1-214ENST00000515035 TMEM191AQ9H0A3 160 aa11.87□□□□□ -0.51
TCOF1-214ENST00000515035 ZNF552Q9H707 407 aaPredicted RBP11.87□□□□□ -0.51
TCOF1-214ENST00000515035 ZMIZ1Q9ULJ6 1067 aa11.87□□□□□ -0.51
TCOF1-214ENST00000515035 SLC45A2Q9UMX9 530 aa11.87□□□□□ -0.51
TCOF1-214ENST00000515035 SNCGO76070 127 aa11.87□□□□□ -0.51
TCOF1-214ENST00000515035 HEXAP06865 529 aa11.87□□□□□ -0.51
TCOF1-214ENST00000515035 LYRM7Q5U5X0 104 aa11.87□□□□□ -0.51
TCOF1-214ENST00000515035 NOXO1Q8NFA2 376 aa11.87□□□□□ -0.51
TCOF1-214ENST00000515035 UBALD1Q8TB05 177 aa11.87□□□□□ -0.51
TCOF1-214ENST00000515035 LOXHD1Q8IVV2 1947 aa11.87□□□□□ -0.51
TCOF1-214ENST00000515035 FRG2CA6NGY1 282 aa11.86□□□□□ -0.51
TCOF1-214ENST00000515035 GEMIN2O14893 280 aaKnown RBP11.86□□□□□ -0.51
TCOF1-214ENST00000515035 CTDSPLO15194 276 aa11.86□□□□□ -0.51
TCOF1-214ENST00000515035 HIST3H3Q16695 136 aa11.86□□□□□ -0.51
TCOF1-214ENST00000515035 OR2T6Q8NHC8 308 aa11.86□□□□□ -0.51
TCOF1-214ENST00000515035 MYEOVQ96EZ4 313 aa11.86□□□□□ -0.51
TCOF1-214ENST00000515035 ATP5SQ99766 215 aa11.86□□□□□ -0.51
TCOF1-214ENST00000515035 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.86□□□□□ -0.51
TCOF1-214ENST00000515035 CACNG5Q9UF02 275 aa11.86□□□□□ -0.51
TCOF1-214ENST00000515035 ERRFI1Q9UJM3 462 aaPredicted RBP11.86□□□□□ -0.51
TCOF1-214ENST00000515035 IGFBP6P24592 240 aaPredicted RBP11.86□□□□□ -0.51
TCOF1-214ENST00000515035 PTGFRP43088 359 aa11.86□□□□□ -0.51
TCOF1-214ENST00000515035 DLK1P80370 383 aa11.86□□□□□ -0.51
TCOF1-214ENST00000515035 ABLIM2Q6H8Q1 611 aa11.86□□□□□ -0.51
TCOF1-214ENST00000515035 C6orf201Q7Z4U5 140 aa11.86□□□□□ -0.51
TCOF1-214ENST00000515035 BLNKQ8WV28 456 aa11.86□□□□□ -0.51
TCOF1-214ENST00000515035 C8orf44Q96CB5 159 aa11.86□□□□□ -0.51
TCOF1-214ENST00000515035 STARD4Q96DR4 205 aa11.86□□□□□ -0.51
TCOF1-214ENST00000515035 MENTQ9BUN1 341 aa11.86□□□□□ -0.51
TCOF1-214ENST00000515035 M0R2Z0 102 aa11.86□□□□□ -0.51
TCOF1-214ENST00000515035 HYAL1Q12794 435 aa11.86□□□□□ -0.51
TCOF1-214ENST00000515035 PWWP2BQ6NUJ5 590 aa11.86□□□□□ -0.51
TCOF1-214ENST00000515035 Q6ZNB5 142 aa11.86□□□□□ -0.51
TCOF1-214ENST00000515035 FAAP24Q9BTP7 215 aa11.86□□□□□ -0.51
TCOF1-214ENST00000515035 PRSS50Q9UI38 385 aa11.86□□□□□ -0.51
TCOF1-214ENST00000515035 HDGFL3Q9Y3E1 203 aa11.86□□□□□ -0.51
TCOF1-214ENST00000515035 SCN9AQ15858 1988 aa11.86□□□□□ -0.51
TCOF1-214ENST00000515035 THSD7AQ9UPZ6 1657 aa11.86□□□□□ -0.51
TCOF1-214ENST00000515035 HYAL3O43820 417 aaPredicted RBP11.86□□□□□ -0.51
TCOF1-214ENST00000515035 NEURL1O76050 574 aa11.86□□□□□ -0.51
TCOF1-214ENST00000515035 EPPINO95925 133 aa11.86□□□□□ -0.51
TCOF1-214ENST00000515035 HRASP01112 189 aa11.86□□□□□ -0.51
TCOF1-214ENST00000515035 S100A4P26447 101 aaKnown RBP11.86□□□□□ -0.51
TCOF1-214ENST00000515035 OR10J1P30954 320 aa11.86□□□□□ -0.51
TCOF1-214ENST00000515035 CD81P60033 236 aa11.86□□□□□ -0.51
TCOF1-214ENST00000515035 TCTN1Q2MV58 587 aa11.86□□□□□ -0.51
TCOF1-214ENST00000515035 STRCP1A6NGW2 1772 aa11.86□□□□□ -0.51
TCOF1-214ENST00000515035 B4DEV8 164 aa11.85□□□□□ -0.51
TCOF1-214ENST00000515035 NAT2P11245 290 aa11.85□□□□□ -0.51
TCOF1-214ENST00000515035 RAE1P78406 368 aaKnown RBP11.85□□□□□ -0.51
TCOF1-214ENST00000515035 B4GALNT1Q00973 533 aa11.85□□□□□ -0.51
TCOF1-214ENST00000515035 FAM209BQ5JX69 171 aa11.85□□□□□ -0.51
TCOF1-214ENST00000515035 PRDM7Q9NQW5 492 aa11.85□□□□□ -0.51
TCOF1-214ENST00000515035 A0A1W2PPC4 97 aa11.85□□□□□ -0.51
TCOF1-214ENST00000515035 TCF21O43680 179 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms