RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 PPP1R3EQ9H7J1 279 aa16.95■□□□□ 0.3
USP53-208ENST00000514305 SNTG1Q9NSN8 517 aa16.95■□□□□ 0.3
USP53-208ENST00000514305 IGKV1-9A0A0C4DH69 117 aa16.94■□□□□ 0.3
USP53-208ENST00000514305 IGHV3-64DA0A0J9YX35 117 aa16.94■□□□□ 0.3
USP53-208ENST00000514305 TMEM178BH3BS89 294 aa16.94■□□□□ 0.3
USP53-208ENST00000514305 FSTL3O95633 263 aa16.94■□□□□ 0.3
USP53-208ENST00000514305 ACAA1P09110 424 aaPredicted RBP16.94■□□□□ 0.3
USP53-208ENST00000514305 SMIM18P0DKX4 95 aa16.94■□□□□ 0.3
USP53-208ENST00000514305 FGF9P31371 208 aaPredicted RBP16.94■□□□□ 0.3
USP53-208ENST00000514305 IL24Q13007 206 aa16.94■□□□□ 0.3
USP53-208ENST00000514305 KISS1Q15726 138 aa16.94■□□□□ 0.3
USP53-208ENST00000514305 DDI2Q5TDH0 399 aa16.94■□□□□ 0.3
USP53-208ENST00000514305 TMEM91Q6ZNR0 172 aa16.94■□□□□ 0.3
USP53-208ENST00000514305 GPR141Q7Z602 305 aa16.94■□□□□ 0.3
USP53-208ENST00000514305 Q8IYB0 196 aa16.94■□□□□ 0.3
USP53-208ENST00000514305 MUC20Q8N307 709 aaPredicted RBP16.94■□□□□ 0.3
USP53-208ENST00000514305 ZSCAN4Q8NAM6 433 aaPredicted RBP16.94■□□□□ 0.3
USP53-208ENST00000514305 ZNF420Q8TAQ5 688 aaPredicted RBP16.94■□□□□ 0.3
USP53-208ENST00000514305 RHOFQ9HBH0 211 aa16.94■□□□□ 0.3
USP53-208ENST00000514305 RASL12Q9NYN1 266 aa16.94■□□□□ 0.3
USP53-208ENST00000514305 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.94■□□□□ 0.32e-16■■□□□ 12
USP53-208ENST00000514305 PPIAL4EA0A075B759 164 aa16.93■□□□□ 0.3
USP53-208ENST00000514305 TRAV38-1A0A0B4J264 116 aa16.93■□□□□ 0.3
USP53-208ENST00000514305 PPIAL4DF5H284 164 aa16.93■□□□□ 0.3
USP53-208ENST00000514305 LYNX1G3V0Z9 82 aa16.93■□□□□ 0.3
USP53-208ENST00000514305 RP2O75695 350 aa16.93■□□□□ 0.3
USP53-208ENST00000514305 TGFAP01135 160 aa16.93■□□□□ 0.3
USP53-208ENST00000514305 MAS1P04201 325 aa16.93■□□□□ 0.3
USP53-208ENST00000514305 PPIAL4FP0DN26 164 aa16.93■□□□□ 0.3
USP53-208ENST00000514305 LYNX1P0DP58 116 aa16.93■□□□□ 0.3
USP53-208ENST00000514305 CALRP27797 417 aaKnown RBP16.93■□□□□ 0.3
USP53-208ENST00000514305 ZNF93P35789 620 aaPredicted RBP16.93■□□□□ 0.3
USP53-208ENST00000514305 RPL5P46777 297 aaKnown RBP16.93■□□□□ 0.3
USP53-208ENST00000514305 RIN1Q13671 783 aa16.93■□□□□ 0.3
USP53-208ENST00000514305 FAM120AOSQ5T036 256 aa16.93■□□□□ 0.3
USP53-208ENST00000514305 FIP1L1Q6UN15 594 aaKnown RBP16.93■□□□□ 0.3
USP53-208ENST00000514305 WDR82Q6UXN9 313 aa16.93■□□□□ 0.3
USP53-208ENST00000514305 SAXO1Q8IYX7 474 aa16.93■□□□□ 0.3
USP53-208ENST00000514305 LRRC29Q8WV35 223 aa16.93■□□□□ 0.3
USP53-208ENST00000514305 AQP3Q92482 292 aa16.93■□□□□ 0.3
USP53-208ENST00000514305 TREM2Q9NZC2 230 aa16.93■□□□□ 0.3
USP53-208ENST00000514305 PPIAL4AQ9Y536 164 aa16.93■□□□□ 0.3
USP53-208ENST00000514305 TRAPPC2LH3BP13 241 aa16.92■□□□□ 0.3
USP53-208ENST00000514305 NDUFA2O43678 99 aa16.92■□□□□ 0.3
USP53-208ENST00000514305 CPT2P23786 658 aa16.92■□□□□ 0.3
USP53-208ENST00000514305 MPZP25189 248 aa16.92■□□□□ 0.3
USP53-208ENST00000514305 POU3F4P49335 361 aa16.92■□□□□ 0.3
USP53-208ENST00000514305 BMXP51813 675 aa16.92■□□□□ 0.3
USP53-208ENST00000514305 DMRTC1Q5HYR2 192 aa16.92■□□□□ 0.3
USP53-208ENST00000514305 IL17RELQ6ZVW7 336 aa16.92■□□□□ 0.3
USP53-208ENST00000514305 WDR86Q86TI4 376 aa16.92■□□□□ 0.3
USP53-208ENST00000514305 KCTD7Q96MP8 289 aa16.92■□□□□ 0.3
USP53-208ENST00000514305 UQCC2Q9BRT2 126 aa16.92■□□□□ 0.3
USP53-208ENST00000514305 STAB1Q9NY15 2570 aa16.91■□□□□ 0.3
USP53-208ENST00000514305 TRAV1-2A0A0B4J238 106 aa16.91■□□□□ 0.3
USP53-208ENST00000514305 PIN1P1O15428 100 aa16.91■□□□□ 0.3
USP53-208ENST00000514305 NOS1APO75052 506 aaPredicted RBP16.91■□□□□ 0.3
USP53-208ENST00000514305 CYB5R3P00387 301 aaPredicted RBP16.91■□□□□ 0.3
USP53-208ENST00000514305 TMEM225BP0DP42 221 aa16.91■□□□□ 0.3
USP53-208ENST00000514305 MUC1P15941 1255 aaPredicted RBP16.91■□□□□ 0.3
USP53-208ENST00000514305 GLRA1P23415 457 aa16.91■□□□□ 0.3
USP53-208ENST00000514305 MDH2P40926 338 aaKnown RBP16.91■□□□□ 0.3
USP53-208ENST00000514305 BTG1P62324 171 aa16.91■□□□□ 0.3
USP53-208ENST00000514305 PDZK1IP1Q13113 114 aa16.91■□□□□ 0.3
USP53-208ENST00000514305 GPR176Q14439 515 aa16.91■□□□□ 0.3
USP53-208ENST00000514305 MICBQ29980 383 aa16.91■□□□□ 0.3
USP53-208ENST00000514305 SPRNQ5BIV9 151 aa16.91■□□□□ 0.3
USP53-208ENST00000514305 ANGPTL5Q86XS5 388 aa16.91■□□□□ 0.3
USP53-208ENST00000514305 C11orf53Q8IXP5 236 aa16.91■□□□□ 0.3
USP53-208ENST00000514305 SPICQ8N5J4 248 aa16.91■□□□□ 0.3
USP53-208ENST00000514305 JAGN1Q8N5M9 183 aa16.91■□□□□ 0.3
USP53-208ENST00000514305 OR52N4Q8NGI2 321 aa16.91■□□□□ 0.3
USP53-208ENST00000514305 OR51A2Q8NGJ7 313 aa16.91■□□□□ 0.3
USP53-208ENST00000514305 OR13F1Q8NGS4 319 aa16.91■□□□□ 0.3
USP53-208ENST00000514305 METTL17Q9H7H0 456 aaPredicted RBP16.91■□□□□ 0.3
USP53-208ENST00000514305 DNAJB11Q9UBS4 358 aa16.91■□□□□ 0.3
USP53-208ENST00000514305 TRAV8-7A0A075B6U6 113 aa16.9■□□□□ 0.3
USP53-208ENST00000514305 ISPDA4D126 451 aa16.9■□□□□ 0.3
USP53-208ENST00000514305 SRRM5B3KS81 715 aa16.9■□□□□ 0.3
USP53-208ENST00000514305 LGALS8O00214 317 aa16.9■□□□□ 0.3
USP53-208ENST00000514305 AIREO43918 545 aa16.9■□□□□ 0.3
USP53-208ENST00000514305 ZNF780AO75290 641 aaPredicted RBP16.9■□□□□ 0.3
USP53-208ENST00000514305 LHBP01229 141 aa16.9■□□□□ 0.3
USP53-208ENST00000514305 PMELP40967 661 aa16.9■□□□□ 0.3
USP53-208ENST00000514305 INSL4Q14641 139 aa16.9■□□□□ 0.3
USP53-208ENST00000514305 TMEM155Q4W5P6 130 aa16.9■□□□□ 0.3
USP53-208ENST00000514305 C22orf42Q6IC83 251 aa16.9■□□□□ 0.3
USP53-208ENST00000514305 ZNF826PQ6ZT77 177 aa16.9■□□□□ 0.3
USP53-208ENST00000514305 SLC25A26Q70HW3 274 aa16.9■□□□□ 0.3
USP53-208ENST00000514305 TPRA1Q86W33 373 aa16.9■□□□□ 0.3
USP53-208ENST00000514305 FAM90A1Q86YD7 464 aa16.9■□□□□ 0.3
USP53-208ENST00000514305 POC1AQ8NBT0 407 aa16.9■□□□□ 0.3
USP53-208ENST00000514305 PXT1Q8NFP0 134 aa16.9■□□□□ 0.3
USP53-208ENST00000514305 OR51F2Q8NH61 342 aa16.9■□□□□ 0.3
USP53-208ENST00000514305 TMIGD2Q96BF3 282 aa16.9■□□□□ 0.3
USP53-208ENST00000514305 C12orf43Q96C57 262 aaKnown RBP16.9■□□□□ 0.3
USP53-208ENST00000514305 YIPF6Q96EC8 236 aa16.9■□□□□ 0.3
USP53-208ENST00000514305 CEP19Q96LK0 163 aa16.9■□□□□ 0.3
USP53-208ENST00000514305 CHCHD6Q9BRQ6 235 aa16.9■□□□□ 0.3
USP53-208ENST00000514305 FGF23Q9GZV9 251 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms