RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 MEIS3P1A6NDR6 274 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 POM121CA8CG34 1229 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 PYCARD-AS1I3L0S3 204 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 PRRG2O14669 202 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 MSTNO14793 375 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 ZNHIT1O43257 154 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 SPRY1O43609 319 aaPredicted RBP7.18□□□□□ -1.26
RNF4-220ENST00000513578 C1QBP02746 253 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 AMY2AP04746 511 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 GLAP06280 429 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 ACAA1P09110 424 aaPredicted RBP7.18□□□□□ -1.26
RNF4-220ENST00000513578 GLI4P10075 376 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 DTYMKP23919 212 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 CHATP28329 748 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 RAD52P43351 418 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 IDH3GP51553 393 aaPredicted RBP7.18□□□□□ -1.26
RNF4-220ENST00000513578 UCP2P55851 309 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 TAS2R46P59540 309 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 PPP1CBP62140 327 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 GNG3P63215 75 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 IL24Q13007 206 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 HLXQ14774 488 aaPredicted RBP7.18□□□□□ -1.26
RNF4-220ENST00000513578 FCN2Q15485 313 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 SRSF7Q16629 238 aaKnown RBP eCLIP7.18□□□□□ -1.26
RNF4-220ENST00000513578 ZFP69Q49AA0 526 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 FAM76BQ5HYJ3 339 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 TIMM23BQ5SRD1 257 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 ZNF626Q68DY1 528 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 SIGIRRQ6IA17 410 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 FAAP20Q6NZ36 180 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 SSX8Q7RTT4 187 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 LINC00596Q86U02 117 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 CD163Q86VB7 1156 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 CXorf67Q86X51 503 aaPredicted RBP7.18□□□□□ -1.26
RNF4-220ENST00000513578 ZNF573Q86YE8 665 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 CALHM1Q8IU99 346 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 ZNF611Q8N823 705 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 NAXEQ8NCW5 288 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 OR13C8Q8NGS7 320 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 OR10K1Q8NGX5 313 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 OR51F2Q8NH61 342 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 CCDC107Q8WV48 283 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 NUDCD2Q8WVJ2 157 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 SNAPC3Q92966 411 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 DVL3Q92997 716 aaPredicted RBP7.18□□□□□ -1.26
RNF4-220ENST00000513578 FBXW5Q969U6 566 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 SLC6A7Q99884 636 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 PAPOLGQ9BWT3 736 aaKnown RBP7.18□□□□□ -1.26
RNF4-220ENST00000513578 BCL2L14Q9BZR8 327 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 FGF23Q9GZV9 251 aaPredicted RBP7.18□□□□□ -1.26
RNF4-220ENST00000513578 OPN3Q9H1Y3 402 aaPredicted RBP7.18□□□□□ -1.26
RNF4-220ENST00000513578 PLK3Q9H4B4 646 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 RANGRFQ9HD47 186 aaPredicted RBP7.18□□□□□ -1.26
RNF4-220ENST00000513578 NKIRAS2Q9NYR9 191 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 FLVCR2Q9UPI3 526 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 SLC25A15Q9Y619 301 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 SMG1Q96Q15 3661 aaKnown RBP7.18□□□□□ -1.26
RNF4-220ENST00000513578 AKAP13Q12802 2813 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 HEATR1Q9H583 2144 aaKnown RBP7.18□□□□□ -1.26
RNF4-220ENST00000513578 SVILO95425 2214 aa7.17□□□□□ -1.26
RNF4-220ENST00000513578 A0A1B0GWJ7 208 aa7.17□□□□□ -1.26
RNF4-220ENST00000513578 ZNF732B4DXR9 585 aa7.17□□□□□ -1.26
RNF4-220ENST00000513578 ANGPTL7O43827 346 aa7.17□□□□□ -1.26
RNF4-220ENST00000513578 CREBL2O60519 120 aaPredicted RBP7.17□□□□□ -1.26
RNF4-220ENST00000513578 HPXP02790 462 aa7.17□□□□□ -1.26
RNF4-220ENST00000513578 SFTPBP07988 381 aa7.17□□□□□ -1.26
RNF4-220ENST00000513578 CELA3BP08861 270 aa7.17□□□□□ -1.26
RNF4-220ENST00000513578 KITLGP21583 273 aa7.17□□□□□ -1.26
RNF4-220ENST00000513578 ERP29P30040 261 aaKnown RBP7.17□□□□□ -1.26
RNF4-220ENST00000513578 OPRM1P35372 400 aa7.17□□□□□ -1.26
RNF4-220ENST00000513578 GZMKP49863 264 aa7.17□□□□□ -1.26
RNF4-220ENST00000513578 RBM11P57052 281 aaKnown RBP7.17□□□□□ -1.26
RNF4-220ENST00000513578 UBE2MP61081 183 aaKnown RBP7.17□□□□□ -1.26
RNF4-220ENST00000513578 FGF12P61328 243 aa7.17□□□□□ -1.26
RNF4-220ENST00000513578 ARFRP1Q13795 201 aa7.17□□□□□ -1.26
RNF4-220ENST00000513578 GRK1Q15835 563 aa7.17□□□□□ -1.26
RNF4-220ENST00000513578 MPV17LQ2QL34 196 aa7.17□□□□□ -1.26
RNF4-220ENST00000513578 DMRTC1Q5HYR2 192 aa7.17□□□□□ -1.26
RNF4-220ENST00000513578 FAHD2BQ6P2I3 314 aaPredicted RBP7.17□□□□□ -1.26
RNF4-220ENST00000513578 ZNF474Q6S9Z5 364 aaPredicted RBP7.17□□□□□ -1.26
RNF4-220ENST00000513578 IDO2Q6ZQW0 420 aa7.17□□□□□ -1.26
RNF4-220ENST00000513578 Q6ZS49 121 aa7.17□□□□□ -1.26
RNF4-220ENST00000513578 NOXA1Q86UR1 476 aa7.17□□□□□ -1.26
RNF4-220ENST00000513578 MYPOPQ86VE0 399 aaPredicted RBP7.17□□□□□ -1.26
RNF4-220ENST00000513578 ZGRF1Q86YA3 2104 aa7.17□□□□□ -1.26
RNF4-220ENST00000513578 DOLPP1Q86YN1 238 aa7.17□□□□□ -1.26
RNF4-220ENST00000513578 GVQW1Q8N7I0 195 aa7.17□□□□□ -1.26
RNF4-220ENST00000513578 ZBTB8BQ8NAP8 495 aaPredicted RBP7.17□□□□□ -1.26
RNF4-220ENST00000513578 OR4S1Q8NGB4 309 aa7.17□□□□□ -1.26
RNF4-220ENST00000513578 OR11H7Q8NGC8 314 aa7.17□□□□□ -1.26
RNF4-220ENST00000513578 OR8S1Q8NH09 359 aa7.17□□□□□ -1.26
RNF4-220ENST00000513578 OR4K15Q8NH41 348 aa7.17□□□□□ -1.26
RNF4-220ENST00000513578 SLC25A40Q8TBP6 338 aa7.17□□□□□ -1.26
RNF4-220ENST00000513578 ASB13Q8WXK3 278 aa7.17□□□□□ -1.26
RNF4-220ENST00000513578 GTF3AQ92664 365 aaKnown RBP7.17□□□□□ -1.26
RNF4-220ENST00000513578 EXTL1Q92935 676 aa7.17□□□□□ -1.26
RNF4-220ENST00000513578 EMG1Q92979 244 aaKnown RBP7.17□□□□□ -1.26
RNF4-220ENST00000513578 FAHD2AQ96GK7 314 aa7.17□□□□□ -1.26
RNF4-220ENST00000513578 MARS2Q96GW9 593 aaKnown RBP7.17□□□□□ -1.26
RNF4-220ENST00000513578 MICU1Q9BPX6 476 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms