RNA–Protein interactions for RNA: ENST00000513321.1

NEIL3-202, Transcript of nei like DNA glycosylase 3, humanhuman

TSL 1 (best)

Gene NEIL3, Length 1,528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-202ENST00000513321 CR1P17927 2039 aa17.57■□□□□ 0.4
NEIL3-202ENST00000513321 MAGEA13PA6NCF6 341 aa17.57■□□□□ 0.4
NEIL3-202ENST00000513321 TNFRSF13BO14836 293 aaPredicted RBP17.57■□□□□ 0.4
NEIL3-202ENST00000513321 ANGPTL7O43827 346 aa17.57■□□□□ 0.4
NEIL3-202ENST00000513321 NXPH2O95156 264 aa17.57■□□□□ 0.4
NEIL3-202ENST00000513321 WNT2P09544 360 aa17.57■□□□□ 0.4
NEIL3-202ENST00000513321 TMEM225BP0DP42 221 aa17.57■□□□□ 0.4
NEIL3-202ENST00000513321 SRMP19623 302 aa17.57■□□□□ 0.4
NEIL3-202ENST00000513321 ERVK11-1P61568 191 aa17.57■□□□□ 0.4
NEIL3-202ENST00000513321 PHYHIPQ92561 330 aa17.57■□□□□ 0.4
NEIL3-202ENST00000513321 NKX3-1Q99801 234 aaPredicted RBP17.57■□□□□ 0.4
NEIL3-202ENST00000513321 SMR3AQ99954 134 aa17.57■□□□□ 0.4
NEIL3-202ENST00000513321 MIOXQ9UGB7 285 aa17.57■□□□□ 0.4
NEIL3-202ENST00000513321 ZNF469Q96JG9 3925 aaPredicted RBP17.56■□□□□ 0.4
NEIL3-202ENST00000513321 MED13LQ71F56 2210 aa17.56■□□□□ 0.4
NEIL3-202ENST00000513321 F8VVB4 439 aa17.56■□□□□ 0.4
NEIL3-202ENST00000513321 F8VWA3 439 aa17.56■□□□□ 0.4
NEIL3-202ENST00000513321 NDUFA2O43678 99 aa17.56■□□□□ 0.4
NEIL3-202ENST00000513321 IGHV4-31P0DP07 118 aa17.56■□□□□ 0.4
NEIL3-202ENST00000513321 ZNF93P35789 620 aaPredicted RBP17.56■□□□□ 0.4
NEIL3-202ENST00000513321 GZMKP49863 264 aa17.56■□□□□ 0.4
NEIL3-202ENST00000513321 ZP1P60852 638 aa17.56■□□□□ 0.4
NEIL3-202ENST00000513321 CD200R1LQ6Q8B3 271 aa17.56■□□□□ 0.4
NEIL3-202ENST00000513321 ACP7Q6ZNF0 438 aa17.56■□□□□ 0.4
NEIL3-202ENST00000513321 C12orf43Q96C57 262 aaKnown RBP17.56■□□□□ 0.4
NEIL3-202ENST00000513321 NLKQ9UBE8 527 aa17.56■□□□□ 0.4
NEIL3-202ENST00000513321 F8P00451 2351 aa17.55■□□□□ 0.4
NEIL3-202ENST00000513321 IGKV1-12A0A0C4DH73 117 aa17.55■□□□□ 0.4
NEIL3-202ENST00000513321 FAM157AC9JC47 383 aa17.55■□□□□ 0.4
NEIL3-202ENST00000513321 TRAPPC2LH3BP13 241 aa17.55■□□□□ 0.4
NEIL3-202ENST00000513321 ARL6IP5O75915 188 aa17.55■□□□□ 0.4
NEIL3-202ENST00000513321 IGKV1D-12P01611 117 aa17.55■□□□□ 0.4
NEIL3-202ENST00000513321 RPS2P15880 293 aaKnown RBP17.55■□□□□ 0.4
NEIL3-202ENST00000513321 NPBWR2P48146 333 aa17.55■□□□□ 0.4
NEIL3-202ENST00000513321 SAXO1Q8IYX7 474 aa17.55■□□□□ 0.4
NEIL3-202ENST00000513321 ZSCAN4Q8NAM6 433 aaPredicted RBP17.55■□□□□ 0.4
NEIL3-202ENST00000513321 C1orf159Q96HA4 380 aa17.55■□□□□ 0.4
NEIL3-202ENST00000513321 HES4Q9HCC6 221 aa17.55■□□□□ 0.4
NEIL3-202ENST00000513321 TRDV1A0A1B0GX56 115 aa17.54■□□□□ 0.4
NEIL3-202ENST00000513321 MEGF11A6BM72 1044 aa17.54■□□□□ 0.4
NEIL3-202ENST00000513321 OR2AT4A6NND4 320 aa17.54■□□□□ 0.4
NEIL3-202ENST00000513321 F5H0A9 414 aaPredicted RBP17.54■□□□□ 0.4
NEIL3-202ENST00000513321 ADAM20O43506 726 aa17.54■□□□□ 0.4
NEIL3-202ENST00000513321 SMIM18P0DKX4 95 aa17.54■□□□□ 0.4
NEIL3-202ENST00000513321 JUNBP17275 347 aaPredicted RBP17.54■□□□□ 0.4
NEIL3-202ENST00000513321 BCL3P20749 454 aa17.54■□□□□ 0.4
NEIL3-202ENST00000513321 SMIM21Q3B7S5 101 aa17.54■□□□□ 0.4
NEIL3-202ENST00000513321 STUMQ69YW2 141 aa17.54■□□□□ 0.4
NEIL3-202ENST00000513321 CYB5R2Q6BCY4 276 aa17.54■□□□□ 0.4
NEIL3-202ENST00000513321 C1QL2Q7Z5L3 287 aa17.54■□□□□ 0.4
NEIL3-202ENST00000513321 LRRTM1Q86UE6 522 aa17.54■□□□□ 0.4
NEIL3-202ENST00000513321 TNFAIP8L1Q8WVP5 186 aa17.54■□□□□ 0.4
NEIL3-202ENST00000513321 MSI2Q96DH6 328 aaKnown RBP17.54■□□□□ 0.4
NEIL3-202ENST00000513321 NEIL1Q96FI4 390 aaPredicted RBP17.54■□□□□ 0.4
NEIL3-202ENST00000513321 CCL13Q99616 98 aa17.54■□□□□ 0.4
NEIL3-202ENST00000513321 LY6G6DO95868 133 aa17.53■□□□□ 0.4
NEIL3-202ENST00000513321 PSG2P11465 335 aa17.53■□□□□ 0.4
NEIL3-202ENST00000513321 ADRA2CP18825 462 aa17.53■□□□□ 0.4
NEIL3-202ENST00000513321 AMY2BP19961 511 aa17.53■□□□□ 0.4
NEIL3-202ENST00000513321 GALP22466 123 aa17.53■□□□□ 0.4
NEIL3-202ENST00000513321 CPT2P23786 658 aa17.53■□□□□ 0.4
NEIL3-202ENST00000513321 CALRP27797 417 aaKnown RBP17.53■□□□□ 0.4
NEIL3-202ENST00000513321 PTGFRP43088 359 aa17.53■□□□□ 0.4
NEIL3-202ENST00000513321 OR3A4PP47883 348 aa17.53■□□□□ 0.4
NEIL3-202ENST00000513321 SEC61A1P61619 476 aaKnown RBP17.53■□□□□ 0.4
NEIL3-202ENST00000513321 KRTAP1-1Q07627 177 aa17.53■□□□□ 0.4
NEIL3-202ENST00000513321 NLRC3Q7RTR2 1065 aa17.53■□□□□ 0.4
NEIL3-202ENST00000513321 BIVMQ86UB2 503 aa17.53■□□□□ 0.4
NEIL3-202ENST00000513321 CDH26Q8IXH8 852 aa17.53■□□□□ 0.4
NEIL3-202ENST00000513321 Q8IYB0 196 aa17.53■□□□□ 0.4
NEIL3-202ENST00000513321 JAGN1Q8N5M9 183 aa17.53■□□□□ 0.4
NEIL3-202ENST00000513321 ANGPTL6Q8NI99 470 aa17.53■□□□□ 0.4
NEIL3-202ENST00000513321 SLITRK2Q9H156 845 aa17.53■□□□□ 0.4
NEIL3-202ENST00000513321 SMURF1Q9HCE7 757 aa17.53■□□□□ 0.4
NEIL3-202ENST00000513321 RBFOX1Q9NWB1 397 aaKnown RBP17.53■□□□□ 0.4
NEIL3-202ENST00000513321 ZANQ9Y493 2812 aa17.53■□□□□ 0.4
NEIL3-202ENST00000513321 IGKV1D-17A0A075B6S4 117 aa17.52■□□□□ 0.4
NEIL3-202ENST00000513321 B4DSR2 109 aa17.52■□□□□ 0.4
NEIL3-202ENST00000513321 TMPRSS2O15393 492 aa17.52■□□□□ 0.4
NEIL3-202ENST00000513321 KDM4BO94953 1096 aa17.52■□□□□ 0.4
NEIL3-202ENST00000513321 TFF1P04155 84 aa17.52■□□□□ 0.4
NEIL3-202ENST00000513321 CD36P16671 472 aa17.52■□□□□ 0.4
NEIL3-202ENST00000513321 ATPAF1Q5TC12 328 aaPredicted RBP17.52■□□□□ 0.4
NEIL3-202ENST00000513321 LINC01356Q8N9X3 169 aa17.52■□□□□ 0.4
NEIL3-202ENST00000513321 PNLDC1Q8NA58 520 aaKnown RBP17.52■□□□□ 0.4
NEIL3-202ENST00000513321 PXT1Q8NFP0 134 aa17.52■□□□□ 0.4
NEIL3-202ENST00000513321 OR8B3Q8NGG8 313 aa17.52■□□□□ 0.4
NEIL3-202ENST00000513321 EMG1Q92979 244 aaKnown RBP17.52■□□□□ 0.4
NEIL3-202ENST00000513321 OR8B2Q96RD0 313 aa17.52■□□□□ 0.4
NEIL3-202ENST00000513321 FAM192AQ9GZU8 254 aa17.52■□□□□ 0.4
NEIL3-202ENST00000513321 LPAR2Q9HBW0 351 aa17.52■□□□□ 0.4
NEIL3-202ENST00000513321 KAAG1Q9UBP8 84 aa17.52■□□□□ 0.4
NEIL3-202ENST00000513321 CTSZQ9UBR2 303 aa17.52■□□□□ 0.4
NEIL3-202ENST00000513321 STUB1Q9UNE7 303 aa17.52■□□□□ 0.4
NEIL3-202ENST00000513321 CSPG4Q6UVK1 2322 aa17.52■□□□□ 0.4
NEIL3-202ENST00000513321 RFPL4AA6NLU0 287 aa17.52■□□□□ 0.39
NEIL3-202ENST00000513321 RFPL4AL1F8VTS6 287 aa17.52■□□□□ 0.39
NEIL3-202ENST00000513321 SFTPBP07988 381 aa17.52■□□□□ 0.39
NEIL3-202ENST00000513321 CALCBP10092 127 aa17.52■□□□□ 0.39
NEIL3-202ENST00000513321 GABRA2P47869 451 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms