RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 DBX1A6NMT0 343 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 IFITM5A6NNB3 132 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 RER1O15258 196 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 SYNGR3O43761 229 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 SOX15O60248 233 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 CT62P0C5K7 136 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 GCSHP23434 173 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 SSTR2P30874 369 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 APOBEC3AP31941 199 aaPredicted RBP3.75□□□□□ -1.81
VCAN-209ENST00000513016 LPAR6P43657 344 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 BTG1P62324 171 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 TGIF1Q15583 401 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 ATP6V1FQ16864 119 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 Q3ZCU0 254 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 DCAF12L2Q5VW00 463 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 BTNL8Q6UX41 500 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 UNQ6494/PRO21346Q6UXR6 183 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 CALHM1Q8IU99 346 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 SIAH3Q8IW03 269 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 DVL3Q92997 716 aaPredicted RBP3.75□□□□□ -1.81
VCAN-209ENST00000513016 C2orf50Q96LR7 162 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 C20orf27Q9GZN8 174 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 RBFOX1Q9NWB1 397 aaKnown RBP3.75□□□□□ -1.81
VCAN-209ENST00000513016 PRNDQ9UKY0 176 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 A1L4Q6 167 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 SMAD7O15105 426 aaKnown RBP3.75□□□□□ -1.81
VCAN-209ENST00000513016 ARG1P05089 322 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 OPRL1P41146 370 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 HCCSP53701 268 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 ELLP55199 621 aaPredicted RBP3.75□□□□□ -1.81
VCAN-209ENST00000513016 C21orf58P58505 322 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 RAE1P78406 368 aaKnown RBP3.75□□□□□ -1.81
VCAN-209ENST00000513016 TMEM41BQ5BJD5 291 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 HIST2H3PS2Q5TEC6 136 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 OR4S1Q8NGB4 309 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 FAM57AQ8TBR7 257 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 ASB13Q8WXK3 278 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 SLC7A6Q92536 515 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 FLYWCH2Q96CP2 140 aaKnown RBP3.75□□□□□ -1.81
VCAN-209ENST00000513016 ITPKCQ96DU7 683 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 ICAM5Q9UMF0 924 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 RAXQ9Y2V3 346 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 LOC101059948A0A1B0GTJ6 334 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 TO15178 435 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 FOXS1O43638 330 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 IGFBP1P08833 259 aaPredicted RBP3.75□□□□□ -1.81
VCAN-209ENST00000513016 CD200P41217 278 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 PIGPP57054 158 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 INPP5JQ15735 1006 aaPredicted RBP3.75□□□□□ -1.81
VCAN-209ENST00000513016 C1QL3Q5VWW1 255 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 ATG4DQ86TL0 474 aaPredicted RBP3.75□□□□□ -1.81
VCAN-209ENST00000513016 SLC51BQ86UW2 128 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 NHLRC2Q8NBF2 726 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 RNASE6Q93091 150 aaKnown RBP3.75□□□□□ -1.81
VCAN-209ENST00000513016 LRRC3BQ96PB8 259 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 SPACA5Q96QH8 159 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 TSPAN32Q96QS1 320 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 HSD17B10Q99714 261 aaKnown RBP3.75□□□□□ -1.81
VCAN-209ENST00000513016 NIPSNAP3BQ9BS92 247 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 TINAGQ9UJW2 476 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 SLC45A2Q9UMX9 530 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 GOLT1BQ9Y3E0 138 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 WIPI2Q9Y4P8 454 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 HS3ST3B1Q9Y662 390 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 KCNE3Q9Y6H6 103 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 DDX60LQ5H9U9 1706 aaKnown RBP3.75□□□□□ -1.81
VCAN-209ENST00000513016 NXPH3O95157 252 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 CLDN14O95500 239 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 CD160O95971 181 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 H2AFB1P0C5Y9 115 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 GZMKP49863 264 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 NDUFA6P56556 154 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 LOXL3P58215 753 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 C1QTNF12Q5T7M4 302 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 DGAT2L7PQ6IED9 249 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 PARP16Q8N5Y8 322 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 RFESDQ8TAC1 157 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 MRGPRDQ8TDS7 321 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 ZNF721Q8TF20 911 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 ABHD3Q8WU67 409 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 CHAC2Q8WUX2 184 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 MMP28Q9H239 520 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 OR1A1Q9P1Q5 309 aa3.75□□□□□ -1.81
VCAN-209ENST00000513016 TNS1Q9HBL0 1735 aaKnown RBP3.75□□□□□ -1.81
VCAN-209ENST00000513016 SEC14L6B5MCN3 397 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 MGST3O14880 152 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 IGLV3-19P01714 112 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 IAPPP10997 89 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 ETV1P50549 477 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 UBE2MP61081 183 aaKnown RBP3.74□□□□□ -1.81
VCAN-209ENST00000513016 RPL31P62899 125 aaKnown RBP3.74□□□□□ -1.81
VCAN-209ENST00000513016 SOHLH1Q5JUK2 328 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 RNFT1Q5M7Z0 435 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 FNDC7Q5VTL7 733 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 GGNBP1Q5YKI7 109 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 EBLN2Q6P2I7 272 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 BCDIN3DQ7Z5W3 292 aaKnown RBP3.74□□□□□ -1.81
VCAN-209ENST00000513016 CENPVQ7Z7K6 275 aaPredicted RBP3.74□□□□□ -1.81
VCAN-209ENST00000513016 COMMD7Q86VX2 200 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 ZNF485Q8NCK3 441 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms