RNA–Protein interactions for RNA: ENST00000512632.5

LIMCH1-215, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMCH1, Length 4,792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-215ENST00000512632 GUSBP11Q6P575 273 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 PPP1R3BQ86XI6 285 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 HIST1H2BAQ96A08 127 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 WFDC1Q9HC57 220 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 RARRES3Q9UL19 164 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 BCAT2O15382 392 aaPredicted RBP8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 HEXAP06865 529 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 ZNF728P0DKX0 622 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 B2MP61769 119 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 SURF2Q15527 256 aaPredicted RBP8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 KCNMB1Q16558 191 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 GUK1Q16774 197 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 AWAT1Q58HT5 328 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 MEX3BQ6ZN04 569 aaKnown RBP8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 RABEPKQ7Z6M1 372 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 CD300LFQ8TDQ1 290 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 PP6455Q8WZ26 134 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 MARS2Q96GW9 593 aaKnown RBP8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 RSRP1Q9BUV0 290 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 ULBP2Q9BZM5 246 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 SH3BGRL3Q9H299 93 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 NELFAQ9H3P2 528 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 FAM212BQ9NTI7 297 aaPredicted RBP8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 HDGFL3Q9Y3E1 203 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 CRYM-AS1A6NIL9 109 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 ZNHIT1O43257 154 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 LCATP04180 440 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 OPN5Q6U736 354 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 PLXDC2Q6UX71 529 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 C5orf24Q7Z6I8 188 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 WDFY3Q8IZQ1 3526 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 PQLC2LA1A4F0 135 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 PRSS44E7EML9 344 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 LSM6P62312 80 aaKnown RBP8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 CTAG1AP78358 180 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 EIF2S3LQ2VIR3 472 aaKnown RBP8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 PIGYQ3MUY2 71 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 WDR74Q6RFH5 385 aaPredicted RBP8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 KMT5CQ86Y97 462 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 CARFQ8N187 725 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 CADM4Q8NFZ8 388 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 OR52M1Q8NGK5 317 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 SLC39A7Q92504 469 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 Q96M66 194 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 TM2D1Q9BX74 207 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 FSCN3Q9NQT6 498 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 SEMA5BQ9P283 1151 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 OR13C7P0DN81 318 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 ZNF44P15621 663 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 FBXW12Q6X9E4 464 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 FAM24BQ8N5W8 94 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 RCL1Q9Y2P8 373 aaKnown RBP8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 TIMM10BQ9Y5J6 103 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 CCDC187A0A096LP49 1063 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 hCG_1809904A0A1W2PP81 198 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 A0A1W2PPH5 198 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 A0A1W2PQM1 296 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 A0A1W2PR64 198 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 A0A1W2PRV1 198 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 FAM157AC9JC47 383 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 GEMIN2O14893 280 aaKnown RBP8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 SGCEO43556 437 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 PTAFRP25105 342 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 ALDH3B1P43353 468 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 OR2B8PP59922 312 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 HGFACQ04756 655 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 SLC16A14Q7RTX9 510 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 SKA3Q8IX90 412 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 SUMF1Q8NBK3 374 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 AKR7LQ8NHP1 331 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 SLC25A43Q8WUT9 341 aaPredicted RBP8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 GPHA2Q96T91 129 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 METTL9Q9H1A3 318 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 KPTNQ9Y664 436 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 V9GYS6 101 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 IGKV1-27A0A075B6S5 117 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 GAPDHP04406 335 aaKnown RBP8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 SRFP11831 508 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 OMGP23515 440 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 CTSSP25774 331 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 FAM3AP98173 230 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 ZNF774Q6NX45 483 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 FBXL14Q8N1E6 418 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 TMEM156Q8N614 296 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 ADPRHL1Q8NDY3 354 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 RNF138Q8WVD3 245 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 NABP1Q96AH0 204 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 ADAMTS9Q9P2N4 1935 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 CCDC163A0A0D9SF12 145 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 A0A0U1RQV5 110 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 CCL3P10147 92 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 ZNF14P17017 642 aaPredicted RBP8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 AFF3P51826 1226 aaKnown RBP8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 CEBPGP53567 150 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 CCL7P80098 99 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 ARL6IP1Q15041 203 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 SHBQ15464 509 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 SLC22A25Q6T423 547 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 NAA60Q9H7X0 242 aa8.06□□□□□ -1.12
LIMCH1-215ENST00000512632 MTCH2Q9Y6C9 303 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms