RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 DNAJC27Q9NZQ0 273 aa7.31□□□□□ -1.24
NUP54-211ENST00000512151 RSL24D1Q9UHA3 163 aaKnown RBP7.31□□□□□ -1.24
NUP54-211ENST00000512151 HSPE1-MOB4S4R3N1 261 aa7.31□□□□□ -1.24
NUP54-211ENST00000512151 A0A1W2PPL8 197 aa7.3□□□□□ -1.24
NUP54-211ENST00000512151 OR6C6A6NF89 314 aa7.3□□□□□ -1.24
NUP54-211ENST00000512151 SGCEO43556 437 aa7.3□□□□□ -1.24
NUP54-211ENST00000512151 GLCEO94923 617 aa7.3□□□□□ -1.24
NUP54-211ENST00000512151 PTBP3O95758 552 aaKnown RBP7.3□□□□□ -1.24
NUP54-211ENST00000512151 MSR1P21757 451 aa7.3□□□□□ -1.24
NUP54-211ENST00000512151 CRHBPP24387 322 aa7.3□□□□□ -1.24
NUP54-211ENST00000512151 CRABP1P29762 137 aa7.3□□□□□ -1.24
NUP54-211ENST00000512151 RPS27P42677 84 aaKnown RBP7.3□□□□□ -1.24
NUP54-211ENST00000512151 CENPAP49450 140 aa7.3□□□□□ -1.24
NUP54-211ENST00000512151 HCCSP53701 268 aa7.3□□□□□ -1.24
NUP54-211ENST00000512151 KCNMB1Q16558 191 aa7.3□□□□□ -1.24
NUP54-211ENST00000512151 KLHL12Q53G59 568 aa7.3□□□□□ -1.24
NUP54-211ENST00000512151 WDR38Q5JTN6 314 aa7.3□□□□□ -1.24
NUP54-211ENST00000512151 SLC25A30Q5SVS4 291 aa7.3□□□□□ -1.24
NUP54-211ENST00000512151 C6orf141Q5SZD1 244 aa7.3□□□□□ -1.24
NUP54-211ENST00000512151 TEX36Q5VZQ5 186 aa7.3□□□□□ -1.24
NUP54-211ENST00000512151 NCR3LG1Q68D85 454 aa7.3□□□□□ -1.24
NUP54-211ENST00000512151 UNQ9370/PRO34162Q6UXP9 181 aa7.3□□□□□ -1.24
NUP54-211ENST00000512151 C18orf65Q6ZTR6 163 aa7.3□□□□□ -1.24
NUP54-211ENST00000512151 GPR141Q7Z602 305 aa7.3□□□□□ -1.24
NUP54-211ENST00000512151 SETD9Q8NE22 299 aa7.3□□□□□ -1.24
NUP54-211ENST00000512151 SLC26A10Q8NG04 563 aa7.3□□□□□ -1.24
NUP54-211ENST00000512151 OR2T4Q8NH00 348 aa7.3□□□□□ -1.24
NUP54-211ENST00000512151 COG8Q96MW5 612 aa7.3□□□□□ -1.24
NUP54-211ENST00000512151 APOL4Q9BPW4 351 aa7.3□□□□□ -1.24
NUP54-211ENST00000512151 TEX12Q9BXU0 123 aa7.3□□□□□ -1.24
NUP54-211ENST00000512151 PRRG3Q9BZD7 231 aa7.3□□□□□ -1.24
NUP54-211ENST00000512151 POLE4Q9NR33 117 aa7.3□□□□□ -1.24
NUP54-211ENST00000512151 C1orf123Q9NWV4 160 aa7.3□□□□□ -1.24
NUP54-211ENST00000512151 IMPAD1Q9NX62 359 aa7.3□□□□□ -1.24
NUP54-211ENST00000512151 BLOC1S6Q9UL45 172 aa7.3□□□□□ -1.24
NUP54-211ENST00000512151 TCF19Q9Y242 345 aa7.3□□□□□ -1.24
NUP54-211ENST00000512151 CCDC160A6NGH7 325 aa7.29□□□□□ -1.24
NUP54-211ENST00000512151 C12orf71A8MTZ7 269 aa7.29□□□□□ -1.24
NUP54-211ENST00000512151 TFF1P04155 84 aa7.29□□□□□ -1.24
NUP54-211ENST00000512151 PAICSP22234 425 aaKnown RBP7.29□□□□□ -1.24
NUP54-211ENST00000512151 FMO3P31513 532 aa7.29□□□□□ -1.24
NUP54-211ENST00000512151 THBS3P49746 956 aa7.29□□□□□ -1.24
NUP54-211ENST00000512151 LUMP51884 338 aaPredicted RBP7.29□□□□□ -1.24
NUP54-211ENST00000512151 DYNC1I2Q13409 638 aaKnown RBP7.29□□□□□ -1.24
NUP54-211ENST00000512151 IKZF1Q13422 519 aa7.29□□□□□ -1.24
NUP54-211ENST00000512151 CCDC92Q53HC0 331 aaPredicted RBP7.29□□□□□ -1.24
NUP54-211ENST00000512151 SLC35D3Q5M8T2 416 aa7.29□□□□□ -1.24
NUP54-211ENST00000512151 DNM1P34Q6PK57 102 aa7.29□□□□□ -1.24
NUP54-211ENST00000512151 COLCA1Q6ZS62 124 aa7.29□□□□□ -1.24
NUP54-211ENST00000512151 KCTD8Q6ZWB6 473 aa7.29□□□□□ -1.24
NUP54-211ENST00000512151 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.29□□□□□ -1.24
NUP54-211ENST00000512151 SYT9Q86SS6 491 aa7.29□□□□□ -1.24
NUP54-211ENST00000512151 ERI1Q8IV48 349 aaKnown RBP7.29□□□□□ -1.24
NUP54-211ENST00000512151 GLB1L2Q8IW92 636 aa7.29□□□□□ -1.24
NUP54-211ENST00000512151 TIGD4Q8IY51 512 aa7.29□□□□□ -1.24
NUP54-211ENST00000512151 PROKR2Q8NFJ6 384 aa7.29□□□□□ -1.24
NUP54-211ENST00000512151 LYZL4Q96KX0 146 aa7.29□□□□□ -1.24
NUP54-211ENST00000512151 DMRTB1Q96MA1 342 aa7.29□□□□□ -1.24
NUP54-211ENST00000512151 MCRIP2Q9BUT9 160 aaKnown RBP7.29□□□□□ -1.24
NUP54-211ENST00000512151 METTL8Q9H825 291 aaKnown RBP7.29□□□□□ -1.24
NUP54-211ENST00000512151 EDA2RQ9HAV5 297 aa7.29□□□□□ -1.24
NUP54-211ENST00000512151 AMBNQ9NP70 447 aa7.29□□□□□ -1.24
NUP54-211ENST00000512151 SF3B6Q9Y3B4 125 aaKnown RBP7.29□□□□□ -1.24
NUP54-211ENST00000512151 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.28□□□□□ -1.24
NUP54-211ENST00000512151 M0R1W7 72 aa7.28□□□□□ -1.24
NUP54-211ENST00000512151 SLC1A7O00341 560 aa7.28□□□□□ -1.24
NUP54-211ENST00000512151 PRODHO43272 600 aa7.28□□□□□ -1.24
NUP54-211ENST00000512151 MPZL2O60487 215 aa7.28□□□□□ -1.24
NUP54-211ENST00000512151 SELENOFO60613 162 aa7.28□□□□□ -1.24
NUP54-211ENST00000512151 RAMP3O60896 148 aa7.28□□□□□ -1.24
NUP54-211ENST00000512151 JTBO76095 146 aa7.28□□□□□ -1.24
NUP54-211ENST00000512151 APOL3O95236 402 aa7.28□□□□□ -1.24
NUP54-211ENST00000512151 MRPL3P09001 348 aaKnown RBP7.28□□□□□ -1.24
NUP54-211ENST00000512151 NR2C1P13056 603 aa7.28□□□□□ -1.24
NUP54-211ENST00000512151 CA6P23280 308 aa7.28□□□□□ -1.24
NUP54-211ENST00000512151 DCKP27707 260 aa7.28□□□□□ -1.24
NUP54-211ENST00000512151 HTR1FP30939 366 aa7.28□□□□□ -1.24
NUP54-211ENST00000512151 CXCR4P61073 352 aa7.28□□□□□ -1.24
NUP54-211ENST00000512151 PCK2Q16822 640 aa7.28□□□□□ -1.24
NUP54-211ENST00000512151 ARSJQ5FYB0 599 aaPredicted RBP7.28□□□□□ -1.24
NUP54-211ENST00000512151 KHDC1LQ5JSQ8 128 aa7.28□□□□□ -1.24
NUP54-211ENST00000512151 MEDAGQ5VYS4 303 aa7.28□□□□□ -1.24
NUP54-211ENST00000512151 SHFQ7M4L6 423 aa7.28□□□□□ -1.24
NUP54-211ENST00000512151 LHFPL4Q7Z7J7 247 aa7.28□□□□□ -1.24
NUP54-211ENST00000512151 OR6K6Q8NGW6 343 aa7.28□□□□□ -1.24
NUP54-211ENST00000512151 OR1F12Q8NHA8 337 aa7.28□□□□□ -1.24
NUP54-211ENST00000512151 H1FXQ92522 213 aaKnown RBP7.28□□□□□ -1.24
NUP54-211ENST00000512151 AMELYQ99218 206 aa7.28□□□□□ -1.24
NUP54-211ENST00000512151 ZNF649Q9BS31 505 aa7.28□□□□□ -1.24
NUP54-211ENST00000512151 ADGRL4Q9HBW9 690 aa7.28□□□□□ -1.24
NUP54-211ENST00000512151 CLN6Q9NWW5 311 aa7.28□□□□□ -1.24
NUP54-211ENST00000512151 H2AFY2Q9P0M6 372 aaPredicted RBP7.28□□□□□ -1.24
NUP54-211ENST00000512151 LHFPL6Q9Y693 200 aa7.28□□□□□ -1.24
NUP54-211ENST00000512151 KRTAP4-8A0A0G2JLE6 195 aa7.27□□□□□ -1.25
NUP54-211ENST00000512151 J3QRE1 110 aa7.27□□□□□ -1.25
NUP54-211ENST00000512151 ZNF593O00488 134 aaPredicted RBP7.27□□□□□ -1.25
NUP54-211ENST00000512151 MRPS14O60783 128 aaKnown RBP7.27□□□□□ -1.25
NUP54-211ENST00000512151 HLA-DQA2P01906 255 aa7.27□□□□□ -1.25
NUP54-211ENST00000512151 DBTP11182 482 aaKnown RBP7.27□□□□□ -1.25
NUP54-211ENST00000512151 NAA10P41227 235 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms