RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 CXXC4Q9H2H0 198 aa12.99□□□□□ -0.33
SCLT1-209ENST00000511426 ZNF442Q9H7R0 627 aa12.99□□□□□ -0.33
SCLT1-209ENST00000511426 HRASLSQ9HDD0 168 aa12.99□□□□□ -0.33
SCLT1-209ENST00000511426 NDRG3Q9UGV2 375 aa12.99□□□□□ -0.33
SCLT1-209ENST00000511426 BSNQ9UPA5 3926 aa12.98□□□□□ -0.33
SCLT1-209ENST00000511426 SOCS1O15524 211 aa12.98□□□□□ -0.33
SCLT1-209ENST00000511426 LILRA1O75019 489 aa12.98□□□□□ -0.33
SCLT1-209ENST00000511426 BTCP35070 178 aa12.98□□□□□ -0.33
SCLT1-209ENST00000511426 BCAP31P51572 246 aa12.98□□□□□ -0.33
SCLT1-209ENST00000511426 KLF3P57682 345 aaPredicted RBP12.98□□□□□ -0.33
SCLT1-209ENST00000511426 BTG1P62324 171 aa12.98□□□□□ -0.33
SCLT1-209ENST00000511426 IL13RA2Q14627 380 aa12.98□□□□□ -0.33
SCLT1-209ENST00000511426 MEF2DQ14814 521 aa12.98□□□□□ -0.33
SCLT1-209ENST00000511426 FJX1Q86VR8 437 aa12.98□□□□□ -0.33
SCLT1-209ENST00000511426 OR10K1Q8NGX5 313 aa12.98□□□□□ -0.33
SCLT1-209ENST00000511426 NEDD4LQ96PU5 975 aa12.98□□□□□ -0.33
SCLT1-209ENST00000511426 OCSTAMPQ9BR26 566 aa12.98□□□□□ -0.33
SCLT1-209ENST00000511426 SPACA1Q9HBV2 294 aa12.98□□□□□ -0.33
SCLT1-209ENST00000511426 CRIM1Q9NZV1 1036 aa12.98□□□□□ -0.33
SCLT1-209ENST00000511426 ST3GAL6Q9Y274 331 aa12.98□□□□□ -0.33
SCLT1-209ENST00000511426 PLEKHA6Q9Y2H5 1048 aa12.98□□□□□ -0.33
SCLT1-209ENST00000511426 RTTNQ86VV8 2226 aa12.97□□□□□ -0.33
SCLT1-209ENST00000511426 WIPF3A6NGB9 483 aa12.97□□□□□ -0.33
SCLT1-209ENST00000511426 VSTM5A8MXK1 200 aa12.97□□□□□ -0.33
SCLT1-209ENST00000511426 PLATP00750 562 aa12.97□□□□□ -0.33
SCLT1-209ENST00000511426 CD74P04233 296 aa12.97□□□□□ -0.33
SCLT1-209ENST00000511426 GLAP06280 429 aa12.97□□□□□ -0.33
SCLT1-209ENST00000511426 SFTPBP07988 381 aa12.97□□□□□ -0.33
SCLT1-209ENST00000511426 PTHLHP12272 177 aa12.97□□□□□ -0.33
SCLT1-209ENST00000511426 SPNP16150 400 aa12.97□□□□□ -0.33
SCLT1-209ENST00000511426 GNB3P16520 340 aa12.97□□□□□ -0.33
SCLT1-209ENST00000511426 NAT1P18440 290 aa12.97□□□□□ -0.33
SCLT1-209ENST00000511426 AGAP20933 346 aa12.97□□□□□ -0.33
SCLT1-209ENST00000511426 HAGHLQ6PII5 290 aaPredicted RBP12.97□□□□□ -0.33
SCLT1-209ENST00000511426 ZGRF1Q86YA3 2104 aa12.97□□□□□ -0.33
SCLT1-209ENST00000511426 FBXL14Q8N1E6 418 aa12.97□□□□□ -0.33
SCLT1-209ENST00000511426 CELF2-AS1Q8N7Q2 184 aa12.97□□□□□ -0.33
SCLT1-209ENST00000511426 TMEM171Q8WVE6 324 aa12.97□□□□□ -0.33
SCLT1-209ENST00000511426 ARHGAP5-AS1Q96IT6 56 aa12.97□□□□□ -0.33
SCLT1-209ENST00000511426 CACNG6Q9BXT2 260 aa12.97□□□□□ -0.33
SCLT1-209ENST00000511426 PECRQ9BY49 303 aa12.97□□□□□ -0.33
SCLT1-209ENST00000511426 TLNRD1Q9H1K6 362 aa12.97□□□□□ -0.33
SCLT1-209ENST00000511426 ESRP2Q9H6T0 727 aaKnown RBP12.97□□□□□ -0.33
SCLT1-209ENST00000511426 IFT46Q9NQC8 304 aa12.97□□□□□ -0.33
SCLT1-209ENST00000511426 PLEKHJ1Q9NW61 149 aa12.97□□□□□ -0.33
SCLT1-209ENST00000511426 NLKQ9UBE8 527 aa12.97□□□□□ -0.33
SCLT1-209ENST00000511426 ERRFI1Q9UJM3 462 aaPredicted RBP12.97□□□□□ -0.33
SCLT1-209ENST00000511426 EDARQ9UNE0 448 aa12.97□□□□□ -0.33
SCLT1-209ENST00000511426 SSX4O60224 188 aa12.96□□□□□ -0.33
SCLT1-209ENST00000511426 PFDN1O60925 122 aa12.96□□□□□ -0.33
SCLT1-209ENST00000511426 NOS1APO75052 506 aaPredicted RBP12.96□□□□□ -0.33
SCLT1-209ENST00000511426 PDCD6O75340 191 aa12.96□□□□□ -0.33
SCLT1-209ENST00000511426 PTBP3O95758 552 aaKnown RBP12.96□□□□□ -0.33
SCLT1-209ENST00000511426 CHATP28329 748 aa12.96□□□□□ -0.33
SCLT1-209ENST00000511426 FABP6P51161 128 aa12.96□□□□□ -0.33
SCLT1-209ENST00000511426 ADORA2A-AS1P86434 159 aa12.96□□□□□ -0.33
SCLT1-209ENST00000511426 GUCA2AQ02747 115 aa12.96□□□□□ -0.33
SCLT1-209ENST00000511426 STEAP1BQ6NZ63 245 aa12.96□□□□□ -0.33
SCLT1-209ENST00000511426 TRAPPC6BQ86SZ2 158 aa12.96□□□□□ -0.33
SCLT1-209ENST00000511426 CHAC2Q8WUX2 184 aa12.96□□□□□ -0.33
SCLT1-209ENST00000511426 CHST6Q9GZX3 395 aa12.96□□□□□ -0.33
SCLT1-209ENST00000511426 IFT22Q9H7X7 185 aa12.96□□□□□ -0.33
SCLT1-209ENST00000511426 ZMAT3Q9HA38 289 aaKnown RBP12.96□□□□□ -0.33
SCLT1-209ENST00000511426 KCNK7Q9Y2U2 307 aa12.96□□□□□ -0.33
SCLT1-209ENST00000511426 SPENQ96T58 3664 aaKnown RBP12.96□□□□□ -0.33
SCLT1-209ENST00000511426 SHANK1Q9Y566 2161 aa12.96□□□□□ -0.34
SCLT1-209ENST00000511426 TLN1Q9Y490 2541 aaKnown RBP12.96□□□□□ -0.34
SCLT1-209ENST00000511426 hCG_2014768A0A024R1R8 64 aa12.96□□□□□ -0.34
SCLT1-209ENST00000511426 PLSCR5A0PG75 271 aa12.96□□□□□ -0.34
SCLT1-209ENST00000511426 POM121CA8CG34 1229 aa12.96□□□□□ -0.34
SCLT1-209ENST00000511426 ZNF736B4DX44 427 aaPredicted RBP12.96□□□□□ -0.34
SCLT1-209ENST00000511426 ATP6V1G2-DDX39BF2Z307 99 aa12.96□□□□□ -0.34
SCLT1-209ENST00000511426 TCRBP04435 133 aa12.96□□□□□ -0.34
SCLT1-209ENST00000511426 THBDP07204 575 aa12.96□□□□□ -0.34
SCLT1-209ENST00000511426 DTYMKP23919 212 aa12.96□□□□□ -0.34
SCLT1-209ENST00000511426 ZNF154Q13106 437 aa12.96□□□□□ -0.34
SCLT1-209ENST00000511426 ARFRP1Q13795 201 aa12.96□□□□□ -0.34
SCLT1-209ENST00000511426 BTN2A1Q7KYR7 527 aa12.96□□□□□ -0.34
SCLT1-209ENST00000511426 WFDC8Q8IUA0 241 aa12.96□□□□□ -0.34
SCLT1-209ENST00000511426 ZNF808Q8N4W9 903 aaPredicted RBP12.96□□□□□ -0.34
SCLT1-209ENST00000511426 OR56B4Q8NH76 319 aa12.96□□□□□ -0.34
SCLT1-209ENST00000511426 CA5BP1Q8WTZ4 195 aa12.96□□□□□ -0.34
SCLT1-209ENST00000511426 SLAMF9Q96A28 289 aa12.96□□□□□ -0.34
SCLT1-209ENST00000511426 MTCH1Q9NZJ7 389 aa12.96□□□□□ -0.34
SCLT1-209ENST00000511426 ATMQ13315 3056 aa12.95□□□□□ -0.34
SCLT1-209ENST00000511426 ATXN7O15265 892 aaPredicted RBP12.95□□□□□ -0.34
SCLT1-209ENST00000511426 MLNRO43193 412 aa12.95□□□□□ -0.34
SCLT1-209ENST00000511426 TRAPPC2P0DI81 140 aa12.95□□□□□ -0.34
SCLT1-209ENST00000511426 TRAPPC2BP0DI82 140 aa12.95□□□□□ -0.34
SCLT1-209ENST00000511426 FUT3P21217 361 aa12.95□□□□□ -0.34
SCLT1-209ENST00000511426 GABRR1P24046 479 aa12.95□□□□□ -0.34
SCLT1-209ENST00000511426 CD200P41217 278 aa12.95□□□□□ -0.34
SCLT1-209ENST00000511426 MRPS15P82914 257 aaKnown RBP12.95□□□□□ -0.34
SCLT1-209ENST00000511426 RBMS2Q15434 407 aaKnown RBP12.95□□□□□ -0.34
SCLT1-209ENST00000511426 TAF9Q16594 264 aa12.95□□□□□ -0.34
SCLT1-209ENST00000511426 C4orf17Q53FE4 359 aa12.95□□□□□ -0.34
SCLT1-209ENST00000511426 FIP1L1Q6UN15 594 aaKnown RBP12.95□□□□□ -0.34
SCLT1-209ENST00000511426 GTF3AQ92664 365 aaKnown RBP12.95□□□□□ -0.34
SCLT1-209ENST00000511426 MRPL24Q96A35 216 aaKnown RBP12.95□□□□□ -0.34
SCLT1-209ENST00000511426 KCNJ16Q9NPI9 418 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms