RNA–Protein interactions for RNA: ENST00000510951.5

NR1I3-227, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 774 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-227ENST00000510951 EXOSC4Q9NPD3 245 aaKnown RBP8.71□□□□□ -1.02
NR1I3-227ENST00000510951 RBFOX1Q9NWB1 397 aaKnown RBP8.71□□□□□ -1.02
NR1I3-227ENST00000510951 FOXJ3Q9UPW0 622 aa8.71□□□□□ -1.02
NR1I3-227ENST00000510951 CSPG4Q6UVK1 2322 aa8.71□□□□□ -1.02
NR1I3-227ENST00000510951 HIVEP1P15822 2718 aa8.71□□□□□ -1.02
NR1I3-227ENST00000510951 TLN2Q9Y4G6 2542 aa8.71□□□□□ -1.02
NR1I3-227ENST00000510951 ZNF469Q96JG9 3925 aaPredicted RBP8.7□□□□□ -1.02
NR1I3-227ENST00000510951 TRAV38-1A0A0B4J264 116 aa8.7□□□□□ -1.02
NR1I3-227ENST00000510951 IGKV1-12A0A0C4DH73 117 aa8.7□□□□□ -1.02
NR1I3-227ENST00000510951 A0A1B0GW55 424 aa8.7□□□□□ -1.02
NR1I3-227ENST00000510951 FAM157AC9JC47 383 aa8.7□□□□□ -1.02
NR1I3-227ENST00000510951 F8VVB4 439 aa8.7□□□□□ -1.02
NR1I3-227ENST00000510951 F8VWA3 439 aa8.7□□□□□ -1.02
NR1I3-227ENST00000510951 ADAM20O43506 726 aa8.7□□□□□ -1.02
NR1I3-227ENST00000510951 ALX3O95076 343 aa8.7□□□□□ -1.02
NR1I3-227ENST00000510951 CYB5AP00167 134 aa8.7□□□□□ -1.02
NR1I3-227ENST00000510951 IGKV1D-12P01611 117 aa8.7□□□□□ -1.02
NR1I3-227ENST00000510951 HEXAP06865 529 aa8.7□□□□□ -1.02
NR1I3-227ENST00000510951 UCHL1P09936 223 aa8.7□□□□□ -1.02
NR1I3-227ENST00000510951 DUX4L2P0CJ85 424 aa8.7□□□□□ -1.02
NR1I3-227ENST00000510951 DUX4L3P0CJ86 424 aa8.7□□□□□ -1.02
NR1I3-227ENST00000510951 DUX4L4P0CJ87 422 aa8.7□□□□□ -1.02
NR1I3-227ENST00000510951 DUX4L5P0CJ88 424 aa8.7□□□□□ -1.02
NR1I3-227ENST00000510951 DUX4L6P0CJ89 424 aa8.7□□□□□ -1.02
NR1I3-227ENST00000510951 DUX4L7P0CJ90 424 aa8.7□□□□□ -1.02
NR1I3-227ENST00000510951 IGHV4-31P0DP07 118 aa8.7□□□□□ -1.02
NR1I3-227ENST00000510951 CALRP27797 417 aaKnown RBP8.7□□□□□ -1.02
NR1I3-227ENST00000510951 ZNF93P35789 620 aaPredicted RBP8.7□□□□□ -1.02
NR1I3-227ENST00000510951 CFHR2P36980 270 aa8.7□□□□□ -1.02
NR1I3-227ENST00000510951 CEBPDP49716 269 aaPredicted RBP8.7□□□□□ -1.02
NR1I3-227ENST00000510951 ZP1P60852 638 aa8.7□□□□□ -1.02
NR1I3-227ENST00000510951 SEC61A1P61619 476 aaKnown RBP8.7□□□□□ -1.02
NR1I3-227ENST00000510951 LMO4P61968 165 aa8.7□□□□□ -1.02
NR1I3-227ENST00000510951 PDZK1IP1Q13113 114 aa8.7□□□□□ -1.02
NR1I3-227ENST00000510951 MICBQ29980 383 aa8.7□□□□□ -1.02
NR1I3-227ENST00000510951 SMIM21Q3B7S5 101 aa8.7□□□□□ -1.02
NR1I3-227ENST00000510951 SYT6Q5T7P8 510 aaPredicted RBP8.7□□□□□ -1.02
NR1I3-227ENST00000510951 TEX36Q5VZQ5 186 aa8.7□□□□□ -1.02
NR1I3-227ENST00000510951 C22orf42Q6IC83 251 aa8.7□□□□□ -1.02
NR1I3-227ENST00000510951 DUX4L9Q6RFH8 374 aaPredicted RBP8.7□□□□□ -1.02
NR1I3-227ENST00000510951 UNQ9370/PRO34162Q6UXP9 181 aa8.7□□□□□ -1.02
NR1I3-227ENST00000510951 ACP7Q6ZNF0 438 aa8.7□□□□□ -1.02
NR1I3-227ENST00000510951 DCDC5Q6ZRR9 648 aa8.7□□□□□ -1.02
NR1I3-227ENST00000510951 MKXQ8IYA7 352 aa8.7□□□□□ -1.02
NR1I3-227ENST00000510951 OR51F2Q8NH61 342 aa8.7□□□□□ -1.02
NR1I3-227ENST00000510951 TNFAIP8L1Q8WVP5 186 aa8.7□□□□□ -1.02
NR1I3-227ENST00000510951 EMG1Q92979 244 aaKnown RBP8.7□□□□□ -1.02
NR1I3-227ENST00000510951 TMIGD2Q96BF3 282 aa8.7□□□□□ -1.02
NR1I3-227ENST00000510951 RAB39BQ96DA2 213 aa8.7□□□□□ -1.02
NR1I3-227ENST00000510951 CPNE2Q96FN4 548 aaPredicted RBP8.7□□□□□ -1.02
NR1I3-227ENST00000510951 NRIP2Q9BQI9 281 aa8.7□□□□□ -1.02
NR1I3-227ENST00000510951 ELL3Q9HB65 397 aaPredicted RBP8.7□□□□□ -1.02
NR1I3-227ENST00000510951 SMURF1Q9HCE7 757 aa8.7□□□□□ -1.02
NR1I3-227ENST00000510951 MTCH1Q9NZJ7 389 aa8.7□□□□□ -1.02
NR1I3-227ENST00000510951 NLKQ9UBE8 527 aa8.7□□□□□ -1.02
NR1I3-227ENST00000510951 IL36RNQ9UBH0 155 aa8.7□□□□□ -1.02
NR1I3-227ENST00000510951 CTSZQ9UBR2 303 aa8.7□□□□□ -1.02
NR1I3-227ENST00000510951 DUX4Q9UBX2 424 aa8.7□□□□□ -1.02
NR1I3-227ENST00000510951 DSCAML1Q8TD84 2053 aa8.69□□□□□ -1.02
NR1I3-227ENST00000510951 ZANQ9Y493 2812 aa8.69□□□□□ -1.02
NR1I3-227ENST00000510951 NKX6-3A6NJ46 265 aa8.69□□□□□ -1.02
NR1I3-227ENST00000510951 TRIM64CA6NLI5 447 aa8.69□□□□□ -1.02
NR1I3-227ENST00000510951 OR2AT4A6NND4 320 aa8.69□□□□□ -1.02
NR1I3-227ENST00000510951 TRAPPC2LH3BP13 241 aa8.69□□□□□ -1.02
NR1I3-227ENST00000510951 GPX5O75715 221 aa8.69□□□□□ -1.02
NR1I3-227ENST00000510951 ALDOBP05062 364 aa8.69□□□□□ -1.02
NR1I3-227ENST00000510951 SELLP14151 372 aa8.69□□□□□ -1.02
NR1I3-227ENST00000510951 CD36P16671 472 aa8.69□□□□□ -1.02
NR1I3-227ENST00000510951 PRKACAP17612 351 aa8.69□□□□□ -1.02
NR1I3-227ENST00000510951 ADRA2CP18825 462 aa8.69□□□□□ -1.02
NR1I3-227ENST00000510951 GADD45AP24522 165 aa8.69□□□□□ -1.02
NR1I3-227ENST00000510951 GABRA2P47869 451 aa8.69□□□□□ -1.02
NR1I3-227ENST00000510951 NPBWR2P48146 333 aa8.69□□□□□ -1.02
NR1I3-227ENST00000510951 KCNJ8Q15842 424 aa8.69□□□□□ -1.02
NR1I3-227ENST00000510951 STUMQ69YW2 141 aa8.69□□□□□ -1.02
NR1I3-227ENST00000510951 NLRC3Q7RTR2 1065 aa8.69□□□□□ -1.02
NR1I3-227ENST00000510951 LRRTM1Q86UE6 522 aa8.69□□□□□ -1.02
NR1I3-227ENST00000510951 FAM216BQ8N7L0 139 aa8.69□□□□□ -1.02
NR1I3-227ENST00000510951 NKAIN3Q8N8D7 197 aa8.69□□□□□ -1.02
NR1I3-227ENST00000510951 PNLDC1Q8NA58 520 aaKnown RBP8.69□□□□□ -1.02
NR1I3-227ENST00000510951 OR8B3Q8NGG8 313 aa8.69□□□□□ -1.02
NR1I3-227ENST00000510951 OR10K1Q8NGX5 313 aa8.69□□□□□ -1.02
NR1I3-227ENST00000510951 NEIL1Q96FI4 390 aaPredicted RBP8.69□□□□□ -1.02
NR1I3-227ENST00000510951 OR8B2Q96RD0 313 aa8.69□□□□□ -1.02
NR1I3-227ENST00000510951 CCL13Q99616 98 aa8.69□□□□□ -1.02
NR1I3-227ENST00000510951 MRPS26Q9BYN8 205 aaKnown RBP8.69□□□□□ -1.02
NR1I3-227ENST00000510951 SLITRK2Q9H156 845 aa8.69□□□□□ -1.02
NR1I3-227ENST00000510951 OR51E2Q9H255 320 aa8.69□□□□□ -1.02
NR1I3-227ENST00000510951 PATZ1Q9HBE1 687 aaKnown RBP8.69□□□□□ -1.02
NR1I3-227ENST00000510951 OR14J1Q9UGF5 321 aa8.69□□□□□ -1.02
NR1I3-227ENST00000510951 STUB1Q9UNE7 303 aa8.69□□□□□ -1.02
NR1I3-227ENST00000510951 IGKV1D-17A0A075B6S4 117 aa8.68□□□□□ -1.02
NR1I3-227ENST00000510951 LOC100506127A0A0U1RQW1 187 aa8.68□□□□□ -1.02
NR1I3-227ENST00000510951 TRDV1A0A1B0GX56 115 aa8.68□□□□□ -1.02
NR1I3-227ENST00000510951 SMIM30A4D0T7 59 aa8.68□□□□□ -1.02
NR1I3-227ENST00000510951 RFPL4AA6NLU0 287 aa8.68□□□□□ -1.02
NR1I3-227ENST00000510951 F5H0A9 414 aaPredicted RBP8.68□□□□□ -1.02
NR1I3-227ENST00000510951 RFPL4AL1F8VTS6 287 aa8.68□□□□□ -1.02
NR1I3-227ENST00000510951 TMPRSS2O15393 492 aa8.68□□□□□ -1.02
NR1I3-227ENST00000510951 PHF1O43189 567 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms