RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 AANATQ16613 207 aa4.59□□□□□ -1.67
USP53-206ENST00000510737 HCP5Q6MZN7 132 aa4.59□□□□□ -1.67
USP53-206ENST00000510737 DPPA2Q7Z7J5 298 aa4.59□□□□□ -1.67
USP53-206ENST00000510737 ZER1Q7Z7L7 766 aa4.59□□□□□ -1.67
USP53-206ENST00000510737 MMD2Q8IY49 270 aa4.59□□□□□ -1.67
USP53-206ENST00000510737 C10orf111Q8N326 155 aa4.59□□□□□ -1.67
USP53-206ENST00000510737 SLC37A3Q8NCC5 494 aa4.59□□□□□ -1.67
USP53-206ENST00000510737 OR10AD1Q8NGE0 317 aa4.59□□□□□ -1.67
USP53-206ENST00000510737 OR51G2Q8NGK0 314 aa4.59□□□□□ -1.67
USP53-206ENST00000510737 SFXN5Q8TD22 340 aa4.59□□□□□ -1.67
USP53-206ENST00000510737 SLC41A3Q96GZ6 507 aa4.59□□□□□ -1.67
USP53-206ENST00000510737 C4orf45Q96LM5 186 aa4.59□□□□□ -1.67
USP53-206ENST00000510737 TMEM237Q96Q45 408 aa4.59□□□□□ -1.67
USP53-206ENST00000510737 P2RX4Q99571 388 aa4.59□□□□□ -1.67
USP53-206ENST00000510737 CCT7Q99832 543 aa4.59□□□□□ -1.67
USP53-206ENST00000510737 MRPL57Q9BQC6 102 aaKnown RBP4.59□□□□□ -1.67
USP53-206ENST00000510737 MMADHCQ9H3L0 296 aaPredicted RBP4.59□□□□□ -1.67
USP53-206ENST00000510737 NANSQ9NR45 359 aa4.59□□□□□ -1.67
USP53-206ENST00000510737 POLE3Q9NRF9 147 aa4.59□□□□□ -1.67
USP53-206ENST00000510737 ONECUT1Q9UBC0 465 aa4.59□□□□□ -1.67
USP53-206ENST00000510737 STK38LQ9Y2H1 464 aa4.59□□□□□ -1.67
USP53-206ENST00000510737 TMED3Q9Y3Q3 217 aa4.59□□□□□ -1.67
USP53-206ENST00000510737 A6NDX4 124 aa4.58□□□□□ -1.68
USP53-206ENST00000510737 LRRC30A6NM36 301 aa4.58□□□□□ -1.68
USP53-206ENST00000510737 F5H5P2 479 aa4.58□□□□□ -1.68
USP53-206ENST00000510737 MLNRO43193 412 aa4.58□□□□□ -1.68
USP53-206ENST00000510737 ADAM20O43506 726 aa4.58□□□□□ -1.68
USP53-206ENST00000510737 UQCRBP14927 111 aa4.58□□□□□ -1.68
USP53-206ENST00000510737 ZNF32P17041 273 aa4.58□□□□□ -1.68
USP53-206ENST00000510737 ZBTB25P24278 435 aa4.58□□□□□ -1.68
USP53-206ENST00000510737 VDAC2P45880 294 aaPredicted RBP4.58□□□□□ -1.68
USP53-206ENST00000510737 BIDP55957 195 aa4.58□□□□□ -1.68
USP53-206ENST00000510737 HSF2Q03933 536 aa4.58□□□□□ -1.68
USP53-206ENST00000510737 NPTX1Q15818 432 aa4.58□□□□□ -1.68
USP53-206ENST00000510737 SYPL1Q16563 259 aa4.58□□□□□ -1.68
USP53-206ENST00000510737 GPAT3Q53EU6 434 aa4.58□□□□□ -1.68
USP53-206ENST00000510737 CLEC12AQ5QGZ9 265 aa4.58□□□□□ -1.68
USP53-206ENST00000510737 MRPL2Q5T653 305 aaKnown RBP4.58□□□□□ -1.68
USP53-206ENST00000510737 ARL9Q6T311 187 aa4.58□□□□□ -1.68
USP53-206ENST00000510737 ZCCHC23Q6ZST2 131 aa4.58□□□□□ -1.68
USP53-206ENST00000510737 NET1Q7Z628 596 aaPredicted RBP4.58□□□□□ -1.68
USP53-206ENST00000510737 OR5AS1Q8N127 324 aa4.58□□□□□ -1.68
USP53-206ENST00000510737 ANKFN1Q8N957 763 aa4.58□□□□□ -1.68
USP53-206ENST00000510737 FBXO25Q8TCJ0 367 aa4.58□□□□□ -1.68
USP53-206ENST00000510737 TEX37Q96LM6 180 aa4.58□□□□□ -1.68
USP53-206ENST00000510737 CDRT15Q96T59 188 aa4.58□□□□□ -1.68
USP53-206ENST00000510737 CHCHD5Q9BSY4 110 aa4.58□□□□□ -1.68
USP53-206ENST00000510737 SLC38A1Q9H2H9 487 aa4.58□□□□□ -1.68
USP53-206ENST00000510737 MID1IP1Q9NPA3 183 aa4.58□□□□□ -1.68
USP53-206ENST00000510737 RRAGDQ9NQL2 400 aaPredicted RBP4.58□□□□□ -1.68
USP53-206ENST00000510737 C1orf109Q9NX04 203 aa4.58□□□□□ -1.68
USP53-206ENST00000510737 STARD10Q9Y365 291 aa4.58□□□□□ -1.68
USP53-206ENST00000510737 DNAH17Q9UFH2 4485 aa4.57□□□□□ -1.68
USP53-206ENST00000510737 IGKV1D-42A0A075B6H8 117 aa4.57□□□□□ -1.68
USP53-206ENST00000510737 A0A096LPI6 279 aa4.57□□□□□ -1.68
USP53-206ENST00000510737 LRRN3E7EW58 273 aa4.57□□□□□ -1.68
USP53-206ENST00000510737 PLPP3O14495 311 aa4.57□□□□□ -1.68
USP53-206ENST00000510737 CFLARO15519 480 aa4.57□□□□□ -1.68
USP53-206ENST00000510737 OR2T1O43869 369 aa4.57□□□□□ -1.68
USP53-206ENST00000510737 CRCPO75575 148 aa4.57□□□□□ -1.68
USP53-206ENST00000510737 GYPAP02724 150 aa4.57□□□□□ -1.68
USP53-206ENST00000510737 GSTA2P09210 222 aa4.57□□□□□ -1.68
USP53-206ENST00000510737 NQO1P15559 274 aaKnown RBP4.57□□□□□ -1.68
USP53-206ENST00000510737 RPS4Y1P22090 263 aaKnown RBP4.57□□□□□ -1.68
USP53-206ENST00000510737 MYCNOSP40205 109 aa4.57□□□□□ -1.68
USP53-206ENST00000510737 MAGEA12P43365 314 aa4.57□□□□□ -1.68
USP53-206ENST00000510737 SRP9P49458 86 aaKnown RBP4.57□□□□□ -1.68
USP53-206ENST00000510737 RGS6P49758 472 aa4.57□□□□□ -1.68
USP53-206ENST00000510737 ARHGDIAP52565 204 aa4.57□□□□□ -1.68
USP53-206ENST00000510737 COPZ1P61923 177 aa4.57□□□□□ -1.68
USP53-206ENST00000510737 ELF3P78545 371 aaPredicted RBP4.57□□□□□ -1.68
USP53-206ENST00000510737 MAB21L1Q13394 359 aa4.57□□□□□ -1.68
USP53-206ENST00000510737 NAB1Q13506 487 aa4.57□□□□□ -1.68
USP53-206ENST00000510737 MPPED2Q15777 294 aa4.57□□□□□ -1.68
USP53-206ENST00000510737 ATAD3BQ5T9A4 648 aa4.57□□□□□ -1.68
USP53-206ENST00000510737 TNFAIP8L2Q6P589 184 aaPredicted RBP4.57□□□□□ -1.68
USP53-206ENST00000510737 CLECL1Q8IZS7 167 aa4.57□□□□□ -1.68
USP53-206ENST00000510737 OR6X1Q8NH79 312 aa4.57□□□□□ -1.68
USP53-206ENST00000510737 PTP4A1Q93096 173 aa4.57□□□□□ -1.68
USP53-206ENST00000510737 MCHR2Q969V1 340 aa4.57□□□□□ -1.68
USP53-206ENST00000510737 SLC35G5Q96KT7 338 aa4.57□□□□□ -1.68
USP53-206ENST00000510737 ZNF649Q9BS31 505 aa4.57□□□□□ -1.68
USP53-206ENST00000510737 DPY30Q9C005 99 aa4.57□□□□□ -1.68
USP53-206ENST00000510737 MTHFD2LQ9H903 347 aaPredicted RBP4.57□□□□□ -1.68
USP53-206ENST00000510737 GPN1Q9HCN4 374 aaPredicted RBP4.57□□□□□ -1.68
USP53-206ENST00000510737 LZTFL1Q9NQ48 299 aa4.57□□□□□ -1.68
USP53-206ENST00000510737 PRDM4Q9UKN5 801 aa4.57□□□□□ -1.68
USP53-206ENST00000510737 ZNF256Q9Y2P7 627 aaPredicted RBP4.57□□□□□ -1.68
USP53-206ENST00000510737 SNX24Q9Y343 169 aa4.57□□□□□ -1.68
USP53-206ENST00000510737 PKD1P98161 4303 aa4.57□□□□□ -1.68
USP53-206ENST00000510737 IGLV4-3A0A075B6K6 122 aa4.56□□□□□ -1.68
USP53-206ENST00000510737 TRAV36DV7A0A075B6V5 113 aa4.56□□□□□ -1.68
USP53-206ENST00000510737 RNF103-CHMP3A0A140T963 221 aa4.56□□□□□ -1.68
USP53-206ENST00000510737 LGALS8O00214 317 aa4.56□□□□□ -1.68
USP53-206ENST00000510737 PGRMC1O00264 195 aaKnown RBP4.56□□□□□ -1.68
USP53-206ENST00000510737 ENTPD5O75356 428 aa4.56□□□□□ -1.68
USP53-206ENST00000510737 HLA-DPB1P04440 258 aa4.56□□□□□ -1.68
USP53-206ENST00000510737 DBIP07108 87 aaKnown RBP4.56□□□□□ -1.68
USP53-206ENST00000510737 IRF2P14316 349 aa4.56□□□□□ -1.68
USP53-206ENST00000510737 SOAT1P35610 550 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms