RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 GABRA3P34903 492 aa4.12□□□□□ -1.75
NEK1-204ENST00000509912 ATP5J2P56134 94 aa4.12□□□□□ -1.75
NEK1-204ENST00000509912 PON3Q15166 354 aa4.12□□□□□ -1.75
NEK1-204ENST00000509912 TMEM155Q4W5P6 130 aa4.12□□□□□ -1.75
NEK1-204ENST00000509912 IZUMO2Q6UXV1 221 aa4.12□□□□□ -1.75
NEK1-204ENST00000509912 Q6ZSR3 168 aa4.12□□□□□ -1.75
NEK1-204ENST00000509912 SSX9Q7RTT3 188 aa4.12□□□□□ -1.75
NEK1-204ENST00000509912 C6orf120Q7Z4R8 191 aa4.12□□□□□ -1.75
NEK1-204ENST00000509912 CALHM3Q86XJ0 350 aa4.12□□□□□ -1.75
NEK1-204ENST00000509912 OR1K1Q8NGR3 316 aa4.12□□□□□ -1.75
NEK1-204ENST00000509912 AKR7LQ8NHP1 331 aa4.12□□□□□ -1.75
NEK1-204ENST00000509912 ROPN1LQ96C74 230 aa4.12□□□□□ -1.75
NEK1-204ENST00000509912 DUS3LQ96G46 650 aaKnown RBP4.12□□□□□ -1.75
NEK1-204ENST00000509912 PRAC1Q96KF2 57 aa4.12□□□□□ -1.75
NEK1-204ENST00000509912 SLC35G5Q96KT7 338 aa4.12□□□□□ -1.75
NEK1-204ENST00000509912 TMEM246Q9BRR3 403 aa4.12□□□□□ -1.75
NEK1-204ENST00000509912 EGLN3Q9H6Z9 239 aa4.12□□□□□ -1.75
NEK1-204ENST00000509912 RTTNQ86VV8 2226 aa4.12□□□□□ -1.75
NEK1-204ENST00000509912 CR1P17927 2039 aa4.12□□□□□ -1.75
NEK1-204ENST00000509912 NSD1Q96L73 2696 aaPredicted RBP4.12□□□□□ -1.75
NEK1-204ENST00000509912 TACC2O95359 2948 aa4.12□□□□□ -1.75
NEK1-204ENST00000509912 TRAV36DV7A0A075B6V5 113 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 XKRY2A2RUG3 117 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 ACOT8O14734 319 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 SAP30O75446 220 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 LYPD3O95274 346 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 CDK1P06493 297 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 ERCC1P07992 297 aaPredicted RBP4.11□□□□□ -1.75
NEK1-204ENST00000509912 STAG3L3P0CL85 134 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 RAB3AP20336 220 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 HOXD3P31249 432 aaPredicted RBP4.11□□□□□ -1.75
NEK1-204ENST00000509912 TMEM33P57088 247 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 IL24Q13007 206 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 CDK10Q15131 360 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 P2RY14Q15391 338 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 TRIP10Q15642 601 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 PAGE3Q5JUK9 113 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 ARPINQ7Z6K5 226 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 DHDDSQ86SQ9 333 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 KRTAP19-1Q8IUB9 90 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 TMEM123Q8N131 208 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 COX18Q8N8Q8 333 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 OR13C3Q8NGS6 347 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 SGK494Q96LW2 274 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 SLC22A4Q9H015 551 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 SLC38A1Q9H2H9 487 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 NDUFAF1Q9Y375 327 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 POLR3HQ9Y535 204 aaPredicted RBP4.11□□□□□ -1.75
NEK1-204ENST00000509912 FBN3Q75N90 2809 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 MED12Q93074 2177 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 HIVEP2P31629 2446 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 ANKRD30BLA7E2S9 258 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 LEUTXA8MZ59 168 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 H0YL77 283 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 TCAPO15273 167 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 XPNPEP2O43895 674 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 IGHV4-31P0DP07 118 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 ZNF35P13682 527 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 GGT1P19440 569 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 FEN1P39748 380 aaKnown RBP4.11□□□□□ -1.75
NEK1-204ENST00000509912 GZMMP51124 257 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 IDH3GP51553 393 aaPredicted RBP4.11□□□□□ -1.75
NEK1-204ENST00000509912 POLR2JP52435 117 aaKnown RBP4.11□□□□□ -1.75
NEK1-204ENST00000509912 CRISP3P54108 245 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 RPL38P63173 70 aaKnown RBP4.11□□□□□ -1.75
NEK1-204ENST00000509912 MYBPC1Q00872 1141 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 CLEC12BQ2HXU8 276 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 WDR38Q5JTN6 314 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 RAET1LQ5VY80 246 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 SLC27A4Q6P1M0 643 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 APOOLQ6UXV4 268 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 UBQLNLQ8IYU4 475 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 ZIC4Q8N9L1 334 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 SLCO4A1Q96BD0 722 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 RAB39BQ96DA2 213 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 SSX3Q99909 188 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 SPAG8Q99932 426 aaPredicted RBP4.11□□□□□ -1.75
NEK1-204ENST00000509912 SLITRK2Q9H156 845 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 ENPP5Q9UJA9 477 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 OR10H1Q9Y4A9 318 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 IGLV5-45A0A087WSX0 123 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 A0A087WUJ7 227 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 SAA2-SAA4A0A096LPE2 208 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 A0A1W2PP18 115 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 FXYD1O00168 92 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 HMGN4O00479 90 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 NME4O00746 187 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 TSHBP01222 138 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 ZNF23P17027 643 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 GLRXP35754 106 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 RGS6P49758 472 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 PUDPQ08623 228 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 MED21Q13503 144 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 TRAM2Q15035 370 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 QPRTQ15274 297 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 SLC35D3Q5M8T2 416 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 C8orf82Q6P1X6 216 aaPredicted RBP4.11□□□□□ -1.75
NEK1-204ENST00000509912 ULK3Q6PHR2 472 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 CREB3L2Q70SY1 520 aa4.11□□□□□ -1.75
NEK1-204ENST00000509912 C16orf62Q7Z3J2 963 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms