RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 CRHP06850 196 aa12.58□□□□□ -0.39
DDX41-208ENST00000507955 PABPC1L2AQ5JQF8 200 aa12.58□□□□□ -0.39
DDX41-208ENST00000507955 OR5AP2Q8NGF4 316 aa12.58□□□□□ -0.39
DDX41-208ENST00000507955 THAP6Q8TBB0 222 aa12.58□□□□□ -0.39
DDX41-208ENST00000507955 PIGCQ92535 297 aa12.58□□□□□ -0.39
DDX41-208ENST00000507955 PHYHIPLQ96FC7 376 aa12.58□□□□□ -0.39
DDX41-208ENST00000507955 RTBDNQ9BSG5 229 aaPredicted RBP12.58□□□□□ -0.39
DDX41-208ENST00000507955 RNF126Q9BV68 326 aa12.58□□□□□ -0.39
DDX41-208ENST00000507955 ASF1BQ9NVP2 202 aa12.58□□□□□ -0.39
DDX41-208ENST00000507955 CRIM1Q9NZV1 1036 aa12.58□□□□□ -0.39
DDX41-208ENST00000507955 GPR132Q9UNW8 380 aa12.58□□□□□ -0.39
DDX41-208ENST00000507955 CSAG2Q9Y5P2 127 aa12.58□□□□□ -0.39
DDX41-208ENST00000507955 MGAQ8IWI9 3026 aa12.58□□□□□ -0.4
DDX41-208ENST00000507955 CYTIPO60759 359 aa12.58□□□□□ -0.4
DDX41-208ENST00000507955 MRPL33O75394 65 aaKnown RBP12.58□□□□□ -0.4
DDX41-208ENST00000507955 TNFSF15O95150 251 aa12.58□□□□□ -0.4
DDX41-208ENST00000507955 HLA-HP01893 362 aa12.58□□□□□ -0.4
DDX41-208ENST00000507955 ZNF883P0CG24 379 aa12.58□□□□□ -0.4
DDX41-208ENST00000507955 EDN3P14138 238 aa12.58□□□□□ -0.4
DDX41-208ENST00000507955 ADCYAP1P18509 176 aa12.58□□□□□ -0.4
DDX41-208ENST00000507955 LHX2P50458 406 aa12.58□□□□□ -0.4
DDX41-208ENST00000507955 SUPT4H1P63272 117 aaKnown RBP12.58□□□□□ -0.4
DDX41-208ENST00000507955 SRSF3P84103 164 aaKnown RBP12.58□□□□□ -0.4
DDX41-208ENST00000507955 MARC2Q969Z3 335 aa12.58□□□□□ -0.4
DDX41-208ENST00000507955 DDA1Q9BW61 102 aa12.58□□□□□ -0.4
DDX41-208ENST00000507955 TTTY12Q9BZ98 90 aa12.58□□□□□ -0.4
DDX41-208ENST00000507955 ZNF629Q9UEG4 869 aaPredicted RBP12.58□□□□□ -0.4
DDX41-208ENST00000507955 TIMM10BQ9Y5J6 103 aa12.58□□□□□ -0.4
DDX41-208ENST00000507955 GPR31O00270 319 aa12.58□□□□□ -0.4
DDX41-208ENST00000507955 SERPINA5P05154 406 aa12.58□□□□□ -0.4
DDX41-208ENST00000507955 SFTPBP07988 381 aa12.58□□□□□ -0.4
DDX41-208ENST00000507955 NAT1P18440 290 aa12.58□□□□□ -0.4
DDX41-208ENST00000507955 FAM3AP98173 230 aa12.58□□□□□ -0.4
DDX41-208ENST00000507955 SCRN3Q0VDG4 424 aa12.58□□□□□ -0.4
DDX41-208ENST00000507955 ZNF169Q14929 603 aaPredicted RBP12.58□□□□□ -0.4
DDX41-208ENST00000507955 RSU1Q15404 277 aa12.58□□□□□ -0.4
DDX41-208ENST00000507955 PLA2G2CQ5R387 149 aa12.58□□□□□ -0.4
DDX41-208ENST00000507955 HES3Q5TGS1 186 aa12.58□□□□□ -0.4
DDX41-208ENST00000507955 CLEC18BQ6UXF7 455 aa12.58□□□□□ -0.4
DDX41-208ENST00000507955 C5orf24Q7Z6I8 188 aa12.58□□□□□ -0.4
DDX41-208ENST00000507955 VASH2Q86V25 355 aa12.58□□□□□ -0.4
DDX41-208ENST00000507955 TMEM17Q86X19 198 aa12.58□□□□□ -0.4
DDX41-208ENST00000507955 CPNE4Q96A23 557 aaPredicted RBP12.58□□□□□ -0.4
DDX41-208ENST00000507955 PIK3IP1Q96FE7 263 aa12.58□□□□□ -0.4
DDX41-208ENST00000507955 ARPC5LQ9BPX5 153 aa12.58□□□□□ -0.4
DDX41-208ENST00000507955 NUDT16L1Q9BRJ7 211 aaKnown RBP12.58□□□□□ -0.4
DDX41-208ENST00000507955 ZPBPQ9BS86 351 aa12.58□□□□□ -0.4
DDX41-208ENST00000507955 ADAT1Q9BUB4 502 aaKnown RBP12.58□□□□□ -0.4
DDX41-208ENST00000507955 NKX6-2Q9C056 277 aaPredicted RBP12.58□□□□□ -0.4
DDX41-208ENST00000507955 CHMP1AQ9HD42 196 aaPredicted RBP12.58□□□□□ -0.4
DDX41-208ENST00000507955 BOKQ9UMX3 212 aaPredicted RBP12.58□□□□□ -0.4
DDX41-208ENST00000507955 GEMIN2O14893 280 aaKnown RBP12.57□□□□□ -0.4
DDX41-208ENST00000507955 DNPH1O43598 174 aa12.57□□□□□ -0.4
DDX41-208ENST00000507955 PSMB6P28072 239 aa12.57□□□□□ -0.4
DDX41-208ENST00000507955 CLDN18P56856 261 aa12.57□□□□□ -0.4
DDX41-208ENST00000507955 ARF1P84077 181 aaKnown RBP12.57□□□□□ -0.4
DDX41-208ENST00000507955 ANKRD55Q3KP44 614 aa12.57□□□□□ -0.4
DDX41-208ENST00000507955 TMEM164Q5U3C3 297 aa12.57□□□□□ -0.4
DDX41-208ENST00000507955 FAHD2BQ6P2I3 314 aaPredicted RBP12.57□□□□□ -0.4
DDX41-208ENST00000507955 ZSCAN4Q8NAM6 433 aaPredicted RBP12.57□□□□□ -0.4
DDX41-208ENST00000507955 INO80EQ8NBZ0 244 aaPredicted RBP12.57□□□□□ -0.4
DDX41-208ENST00000507955 FAHD2AQ96GK7 314 aa12.57□□□□□ -0.4
DDX41-208ENST00000507955 MSGN1A6NI15 193 aa12.57□□□□□ -0.4
DDX41-208ENST00000507955 ACTL6AO96019 429 aa12.57□□□□□ -0.4
DDX41-208ENST00000507955 NRASP01111 189 aa12.57□□□□□ -0.4
DDX41-208ENST00000507955 CSTBP04080 98 aaKnown RBP12.57□□□□□ -0.4
DDX41-208ENST00000507955 GUCA2BQ16661 112 aa12.57□□□□□ -0.4
DDX41-208ENST00000507955 PDSS1Q5T2R2 415 aa12.57□□□□□ -0.4
DDX41-208ENST00000507955 TMEM251Q8N6I4 163 aa12.57□□□□□ -0.4
DDX41-208ENST00000507955 CLRN3Q8NCR9 226 aa12.57□□□□□ -0.4
DDX41-208ENST00000507955 FAM173AQ9BQD7 235 aa12.57□□□□□ -0.4
DDX41-208ENST00000507955 PRRG4Q9BZD6 226 aa12.57□□□□□ -0.4
DDX41-208ENST00000507955 LIME1Q9H400 295 aa12.57□□□□□ -0.4
DDX41-208ENST00000507955 ACKR4Q9NPB9 350 aa12.57□□□□□ -0.4
DDX41-208ENST00000507955 CYTL1Q9NRR1 136 aa12.57□□□□□ -0.4
DDX41-208ENST00000507955 ANAPC10Q9UM13 185 aa12.57□□□□□ -0.4
DDX41-208ENST00000507955 SHANK1Q9Y566 2161 aa12.57□□□□□ -0.4
DDX41-208ENST00000507955 A0A1B0GW55 424 aa12.56□□□□□ -0.4
DDX41-208ENST00000507955 FIGNL2A6NMB9 653 aa12.56□□□□□ -0.4
DDX41-208ENST00000507955 APOC1P02654 83 aa12.56□□□□□ -0.4
DDX41-208ENST00000507955 MMP7P09237 267 aaPredicted RBP12.56□□□□□ -0.4
DDX41-208ENST00000507955 DUX4L2P0CJ85 424 aa12.56□□□□□ -0.4
DDX41-208ENST00000507955 DUX4L3P0CJ86 424 aa12.56□□□□□ -0.4
DDX41-208ENST00000507955 DUX4L4P0CJ87 422 aa12.56□□□□□ -0.4
DDX41-208ENST00000507955 DUX4L5P0CJ88 424 aa12.56□□□□□ -0.4
DDX41-208ENST00000507955 DUX4L6P0CJ89 424 aa12.56□□□□□ -0.4
DDX41-208ENST00000507955 DUX4L7P0CJ90 424 aa12.56□□□□□ -0.4
DDX41-208ENST00000507955 CPT2P23786 658 aa12.56□□□□□ -0.4
DDX41-208ENST00000507955 ALDH3B1P43353 468 aa12.56□□□□□ -0.4
DDX41-208ENST00000507955 PNLIPRP3Q17RR3 467 aa12.56□□□□□ -0.4
DDX41-208ENST00000507955 CHRFAM7AQ494W8 412 aa12.56□□□□□ -0.4
DDX41-208ENST00000507955 TMEM128Q5BJH2 165 aa12.56□□□□□ -0.4
DDX41-208ENST00000507955 VAX1Q5SQQ9 334 aa12.56□□□□□ -0.4
DDX41-208ENST00000507955 CALHM1Q8IU99 346 aa12.56□□□□□ -0.4
DDX41-208ENST00000507955 DCUN1D4Q92564 292 aa12.56□□□□□ -0.4
DDX41-208ENST00000507955 BORCS8Q96FH0 119 aa12.56□□□□□ -0.4
DDX41-208ENST00000507955 Q96M66 194 aa12.56□□□□□ -0.4
DDX41-208ENST00000507955 DUX4Q9UBX2 424 aa12.56□□□□□ -0.4
DDX41-208ENST00000507955 LHX6Q9UPM6 363 aa12.56□□□□□ -0.4
DDX41-208ENST00000507955 LIPGQ9Y5X9 500 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms