RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 A6NIN4 97 aa9.36□□□□□ -0.91
HMGCS1-204ENST00000507293 ZNF670-ZNF695F2Z2N8 137 aa9.36□□□□□ -0.91
HMGCS1-204ENST00000507293 DLGAP1O14490 977 aa9.36□□□□□ -0.91
HMGCS1-204ENST00000507293 GYG2O15488 501 aa9.36□□□□□ -0.91
HMGCS1-204ENST00000507293 MITFO75030 526 aaPredicted RBP9.36□□□□□ -0.91
HMGCS1-204ENST00000507293 NOS1APO75052 506 aaPredicted RBP9.36□□□□□ -0.91
HMGCS1-204ENST00000507293 TK1P04183 234 aa9.36□□□□□ -0.91
HMGCS1-204ENST00000507293 PIPP12273 146 aaPredicted RBP9.36□□□□□ -0.91
HMGCS1-204ENST00000507293 LGALS4P56470 323 aa9.36□□□□□ -0.91
HMGCS1-204ENST00000507293 PLA1AQ53H76 456 aa9.36□□□□□ -0.91
HMGCS1-204ENST00000507293 C11orf88Q6PI97 169 aa9.36□□□□□ -0.91
HMGCS1-204ENST00000507293 ELMOD2Q8IZ81 293 aa9.36□□□□□ -0.91
HMGCS1-204ENST00000507293 TCEANCQ8N8B7 351 aa9.36□□□□□ -0.91
HMGCS1-204ENST00000507293 OR14K1Q8NGZ2 314 aa9.36□□□□□ -0.91
HMGCS1-204ENST00000507293 TRMT10AQ8TBZ6 339 aaKnown RBP9.36□□□□□ -0.91
HMGCS1-204ENST00000507293 NKX3-1Q99801 234 aaPredicted RBP9.36□□□□□ -0.91
HMGCS1-204ENST00000507293 NPFFR1Q9GZQ6 430 aa9.36□□□□□ -0.91
HMGCS1-204ENST00000507293 HES4Q9HCC6 221 aa9.36□□□□□ -0.91
HMGCS1-204ENST00000507293 MRM2Q9UI43 246 aaKnown RBP9.36□□□□□ -0.91
HMGCS1-204ENST00000507293 POMPQ9Y244 141 aa9.36□□□□□ -0.91
HMGCS1-204ENST00000507293 MEGF11A6BM72 1044 aa9.35□□□□□ -0.91
HMGCS1-204ENST00000507293 G3V4G9 280 aa9.35□□□□□ -0.91
HMGCS1-204ENST00000507293 VSIG10L2P0DP72 767 aa9.35□□□□□ -0.91
HMGCS1-204ENST00000507293 MPZP25189 248 aa9.35□□□□□ -0.91
HMGCS1-204ENST00000507293 DLX6P56179 175 aa9.35□□□□□ -0.91
HMGCS1-204ENST00000507293 ACTR3P61158 418 aa9.35□□□□□ -0.91
HMGCS1-204ENST00000507293 AADACL4Q5VUY2 407 aa9.35□□□□□ -0.91
HMGCS1-204ENST00000507293 SLX4IPQ5VYV7 408 aa9.35□□□□□ -0.91
HMGCS1-204ENST00000507293 NXNL2Q5VZ03 156 aa9.35□□□□□ -0.91
HMGCS1-204ENST00000507293 C12orf73Q69YU5 71 aa9.35□□□□□ -0.91
HMGCS1-204ENST00000507293 LIAT1Q6ZQX7 453 aa9.35□□□□□ -0.91
HMGCS1-204ENST00000507293 Q6ZSR3 168 aa9.35□□□□□ -0.91
HMGCS1-204ENST00000507293 SSX6Q7RTT6 188 aa9.35□□□□□ -0.91
HMGCS1-204ENST00000507293 LHFPL4Q7Z7J7 247 aa9.35□□□□□ -0.91
HMGCS1-204ENST00000507293 ANGPTL5Q86XS5 388 aa9.35□□□□□ -0.91
HMGCS1-204ENST00000507293 CALHM1Q8IU99 346 aa9.35□□□□□ -0.91
HMGCS1-204ENST00000507293 DYNAPQ8N1N2 210 aa9.35□□□□□ -0.91
HMGCS1-204ENST00000507293 ASCC1Q8N9N2 400 aaKnown RBP9.35□□□□□ -0.91
HMGCS1-204ENST00000507293 TMEM163Q8TC26 289 aa9.35□□□□□ -0.91
HMGCS1-204ENST00000507293 PIFOQ8TCI5 191 aa9.35□□□□□ -0.91
HMGCS1-204ENST00000507293 BCAS4Q8TDM0 211 aa9.35□□□□□ -0.91
HMGCS1-204ENST00000507293 CFHR4Q92496 578 aa9.35□□□□□ -0.91
HMGCS1-204ENST00000507293 MNTQ99583 582 aa9.35□□□□□ -0.91
HMGCS1-204ENST00000507293 TBX5Q99593 518 aa9.35□□□□□ -0.91
HMGCS1-204ENST00000507293 PKIBQ9C010 78 aa9.35□□□□□ -0.91
HMGCS1-204ENST00000507293 KRT84Q9NSB2 600 aa9.35□□□□□ -0.91
HMGCS1-204ENST00000507293 CLN6Q9NWW5 311 aa9.35□□□□□ -0.91
HMGCS1-204ENST00000507293 H2AFY2Q9P0M6 372 aaPredicted RBP9.35□□□□□ -0.91
HMGCS1-204ENST00000507293 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.35□□□□□ -0.91
HMGCS1-204ENST00000507293 SLC22A13Q9Y226 551 aa9.35□□□□□ -0.91
HMGCS1-204ENST00000507293 SNX5Q9Y5X3 404 aa9.35□□□□□ -0.91
HMGCS1-204ENST00000507293 FAM230AA0A1W2PPH8 454 aa9.34□□□□□ -0.91
HMGCS1-204ENST00000507293 MEX3AA1L020 520 aaKnown RBP9.34□□□□□ -0.91
HMGCS1-204ENST00000507293 DHRS7CA6NNS2 312 aa9.34□□□□□ -0.91
HMGCS1-204ENST00000507293 ZAR1LA6NP61 321 aa9.34□□□□□ -0.91
HMGCS1-204ENST00000507293 C17orf98A8MV24 154 aa9.34□□□□□ -0.91
HMGCS1-204ENST00000507293 H3BSH0 61 aa9.34□□□□□ -0.91
HMGCS1-204ENST00000507293 RPP14O95059 124 aaKnown RBP9.34□□□□□ -0.91
HMGCS1-204ENST00000507293 OPN1MWP04001 364 aa9.34□□□□□ -0.91
HMGCS1-204ENST00000507293 ARG1P05089 322 aa9.34□□□□□ -0.91
HMGCS1-204ENST00000507293 OPN1MW2P0DN77 364 aa9.34□□□□□ -0.91
HMGCS1-204ENST00000507293 OPN1MW3P0DN78 364 aa9.34□□□□□ -0.91
HMGCS1-204ENST00000507293 CCL1P22362 96 aa9.34□□□□□ -0.91
HMGCS1-204ENST00000507293 EPHA2P29317 976 aa9.34□□□□□ -0.91
HMGCS1-204ENST00000507293 ERVK11-1P61568 191 aa9.34□□□□□ -0.91
HMGCS1-204ENST00000507293 COL10A1Q03692 680 aa9.34□□□□□ -0.91
HMGCS1-204ENST00000507293 IL24Q13007 206 aa9.34□□□□□ -0.91
HMGCS1-204ENST00000507293 ODF4Q2M2E3 257 aa9.34□□□□□ -0.91
HMGCS1-204ENST00000507293 BEAN1Q3B7T3 259 aa9.34□□□□□ -0.91
HMGCS1-204ENST00000507293 LYG1Q8N1E2 194 aa9.34□□□□□ -0.91
HMGCS1-204ENST00000507293 UTP4Q969X6 686 aaKnown RBP9.34□□□□□ -0.91
HMGCS1-204ENST00000507293 SLC7A6OSQ96CW6 309 aaPredicted RBP9.34□□□□□ -0.91
HMGCS1-204ENST00000507293 IL4I1Q96RQ9 567 aa9.34□□□□□ -0.91
HMGCS1-204ENST00000507293 ZNF702PQ9H963 129 aa9.34□□□□□ -0.91
HMGCS1-204ENST00000507293 PLEKHA1Q9HB21 404 aa9.34□□□□□ -0.91
HMGCS1-204ENST00000507293 PRKDCP78527 4128 aaKnown RBP9.33□□□□□ -0.92
HMGCS1-204ENST00000507293 FAM90A8PA6NJQ4 464 aa9.33□□□□□ -0.92
HMGCS1-204ENST00000507293 VGLL3A8MV65 326 aa9.33□□□□□ -0.92
HMGCS1-204ENST00000507293 ODF3BA8MYP8 253 aa9.33□□□□□ -0.92
HMGCS1-204ENST00000507293 K7N7A8 449 aa9.33□□□□□ -0.92
HMGCS1-204ENST00000507293 DNAJC8O75937 253 aaPredicted RBP9.33□□□□□ -0.92
HMGCS1-204ENST00000507293 KRT8P05787 483 aa9.33□□□□□ -0.92
HMGCS1-204ENST00000507293 RAB13P51153 203 aa9.33□□□□□ -0.92
HMGCS1-204ENST00000507293 EDDM3BP56851 147 aa9.33□□□□□ -0.92
HMGCS1-204ENST00000507293 EFNB1P98172 346 aa9.33□□□□□ -0.92
HMGCS1-204ENST00000507293 HABP2Q14520 560 aaPredicted RBP9.33□□□□□ -0.92
HMGCS1-204ENST00000507293 FAM189A2Q15884 450 aa9.33□□□□□ -0.92
HMGCS1-204ENST00000507293 GID4Q8IVV7 300 aa9.33□□□□□ -0.92
HMGCS1-204ENST00000507293 YIPF7Q8N8F6 280 aa9.33□□□□□ -0.92
HMGCS1-204ENST00000507293 SLAMF9Q96A28 289 aa9.33□□□□□ -0.92
HMGCS1-204ENST00000507293 FOXRED1Q96CU9 486 aaPredicted RBP9.33□□□□□ -0.92
HMGCS1-204ENST00000507293 CEP19Q96LK0 163 aa9.33□□□□□ -0.92
HMGCS1-204ENST00000507293 CADM1Q9BY67 442 aaKnown RBP9.33□□□□□ -0.92
HMGCS1-204ENST00000507293 SLC7A11Q9UPY5 501 aa9.33□□□□□ -0.92
HMGCS1-204ENST00000507293 TCF19Q9Y242 345 aa9.33□□□□□ -0.92
HMGCS1-204ENST00000507293 TBL2Q9Y4P3 447 aaKnown RBP9.33□□□□□ -0.92
HMGCS1-204ENST00000507293 IGKV1-27A0A075B6S5 117 aa9.32□□□□□ -0.92
HMGCS1-204ENST00000507293 A6NDX4 124 aa9.32□□□□□ -0.92
HMGCS1-204ENST00000507293 F8VVB4 439 aa9.32□□□□□ -0.92
HMGCS1-204ENST00000507293 F8VWA3 439 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms