RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 MINOS1Q5TGZ0 78 aa17.03■□□□□ 0.32
SQSTM1-210ENST00000506042 ZNF782Q6ZMW2 699 aaPredicted RBP17.03■□□□□ 0.32
SQSTM1-210ENST00000506042 CD177Q8N6Q3 437 aa17.03■□□□□ 0.32
SQSTM1-210ENST00000506042 CNN2Q99439 309 aaKnown RBP17.03■□□□□ 0.32
SQSTM1-210ENST00000506042 CHID1Q9BWS9 393 aa17.03■□□□□ 0.32
SQSTM1-210ENST00000506042 ZNF702PQ9H963 129 aa17.03■□□□□ 0.32
SQSTM1-210ENST00000506042 VNN3Q9NY84 501 aa17.03■□□□□ 0.32
SQSTM1-210ENST00000506042 MINOS1-NBL1R4GNA1 71 aa17.03■□□□□ 0.32
SQSTM1-210ENST00000506042 hADV38S2A0JD32 116 aa17.02■□□□□ 0.32
SQSTM1-210ENST00000506042 FAM90A8PA6NJQ4 464 aa17.02■□□□□ 0.32
SQSTM1-210ENST00000506042 DUS4LO95620 317 aaKnown RBP17.02■□□□□ 0.32
SQSTM1-210ENST00000506042 CYB5AP00167 134 aa17.02■□□□□ 0.32
SQSTM1-210ENST00000506042 CDK5Q00535 292 aa17.02■□□□□ 0.32
SQSTM1-210ENST00000506042 MEF2CQ06413 473 aaPredicted RBP17.02■□□□□ 0.32
SQSTM1-210ENST00000506042 SSX2Q16385 188 aa17.02■□□□□ 0.32
SQSTM1-210ENST00000506042 PLA1AQ53H76 456 aa17.02■□□□□ 0.32
SQSTM1-210ENST00000506042 ASRGL1Q7L266 308 aa17.02■□□□□ 0.32
SQSTM1-210ENST00000506042 C16orf82Q7Z2V1 217 aa17.02■□□□□ 0.32
SQSTM1-210ENST00000506042 NSL1Q96IY1 281 aa17.02■□□□□ 0.32
SQSTM1-210ENST00000506042 ZNF714Q96N38 554 aa17.02■□□□□ 0.32
SQSTM1-210ENST00000506042 OR8B4Q96RC9 309 aa17.02■□□□□ 0.32
SQSTM1-210ENST00000506042 NRIP2Q9BQI9 281 aa17.02■□□□□ 0.32
SQSTM1-210ENST00000506042 GPR61Q9BZJ8 451 aa17.02■□□□□ 0.32
SQSTM1-210ENST00000506042 PKIBQ9C010 78 aa17.02■□□□□ 0.32
SQSTM1-210ENST00000506042 SLC22A13Q9Y226 551 aa17.02■□□□□ 0.32
SQSTM1-210ENST00000506042 C17orf98A8MV24 154 aa17.01■□□□□ 0.31
SQSTM1-210ENST00000506042 K7N7A8 449 aa17.01■□□□□ 0.31
SQSTM1-210ENST00000506042 FAM107AO95990 144 aa17.01■□□□□ 0.31
SQSTM1-210ENST00000506042 SERPINA3P01011 423 aa17.01■□□□□ 0.31
SQSTM1-210ENST00000506042 PF4P02776 101 aa17.01■□□□□ 0.31
SQSTM1-210ENST00000506042 PIPP12273 146 aaPredicted RBP17.01■□□□□ 0.31
SQSTM1-210ENST00000506042 CCL3L1P16619 93 aa17.01■□□□□ 0.31
SQSTM1-210ENST00000506042 CALB2P22676 271 aa17.01■□□□□ 0.31
SQSTM1-210ENST00000506042 IL24Q13007 206 aa17.01■□□□□ 0.31
SQSTM1-210ENST00000506042 OXLD1Q5BKU9 147 aa17.01■□□□□ 0.31
SQSTM1-210ENST00000506042 Q8IYB0 196 aa17.01■□□□□ 0.31
SQSTM1-210ENST00000506042 ENTHD1Q8IYW4 607 aa17.01■□□□□ 0.31
SQSTM1-210ENST00000506042 CCDC54Q8NEL0 328 aa17.01■□□□□ 0.31
SQSTM1-210ENST00000506042 OR11H6Q8NGC7 330 aa17.01■□□□□ 0.31
SQSTM1-210ENST00000506042 NDNFQ8TB73 568 aa17.01■□□□□ 0.31
SQSTM1-210ENST00000506042 TEAD3Q99594 435 aa17.01■□□□□ 0.31
SQSTM1-210ENST00000506042 ADI1Q9BV57 179 aa17.01■□□□□ 0.31
SQSTM1-210ENST00000506042 FGF23Q9GZV9 251 aaPredicted RBP17.01■□□□□ 0.31
SQSTM1-210ENST00000506042 MMP28Q9H239 520 aa17.01■□□□□ 0.31
SQSTM1-210ENST00000506042 SLC25A19Q9HC21 320 aa17.01■□□□□ 0.31
SQSTM1-210ENST00000506042 SERTAD4Q9NUC0 356 aa17.01■□□□□ 0.31
SQSTM1-210ENST00000506042 KLHDC2Q9Y2U9 406 aa17.01■□□□□ 0.31
SQSTM1-210ENST00000506042 GATBO75879 557 aaKnown RBP17■□□□□ 0.31
SQSTM1-210ENST00000506042 CD28P10747 220 aa17■□□□□ 0.31
SQSTM1-210ENST00000506042 BRS3P32247 399 aa17■□□□□ 0.31
SQSTM1-210ENST00000506042 SLC35A2P78381 396 aa17■□□□□ 0.31
SQSTM1-210ENST00000506042 SLC34A1Q06495 639 aa17■□□□□ 0.31
SQSTM1-210ENST00000506042 ZNF626Q68DY1 528 aa17■□□□□ 0.31
SQSTM1-210ENST00000506042 LYG1Q8N1E2 194 aa17■□□□□ 0.31
SQSTM1-210ENST00000506042 DPF1Q92782 380 aa17■□□□□ 0.31
SQSTM1-210ENST00000506042 DNAJB9Q9UBS3 223 aa17■□□□□ 0.31
SQSTM1-210ENST00000506042 SNX5Q9Y5X3 404 aa17■□□□□ 0.31
SQSTM1-210ENST00000506042 PQLC2LA1A4F0 135 aa16.99■□□□□ 0.31
SQSTM1-210ENST00000506042 A6NDX4 124 aa16.99■□□□□ 0.31
SQSTM1-210ENST00000506042 AQP12BA6NM10 295 aa16.99■□□□□ 0.31
SQSTM1-210ENST00000506042 ZNF670-ZNF695F2Z2N8 137 aa16.99■□□□□ 0.31
SQSTM1-210ENST00000506042 PSMD9O00233 223 aa16.99■□□□□ 0.31
SQSTM1-210ENST00000506042 SYNGR1O43759 233 aa16.99■□□□□ 0.31
SQSTM1-210ENST00000506042 PRB2P02812 416 aaPredicted RBP16.99■□□□□ 0.31
SQSTM1-210ENST00000506042 MRPL3P09001 348 aaKnown RBP16.99■□□□□ 0.31
SQSTM1-210ENST00000506042 MPZP25189 248 aa16.99■□□□□ 0.31
SQSTM1-210ENST00000506042 GNGT1P63211 74 aa16.99■□□□□ 0.31
SQSTM1-210ENST00000506042 DCTN2Q13561 401 aaKnown RBP16.99■□□□□ 0.31
SQSTM1-210ENST00000506042 ZNF273Q14593 569 aa16.99■□□□□ 0.31
SQSTM1-210ENST00000506042 HIST2H2BDQ6DRA6 164 aa16.99■□□□□ 0.31
SQSTM1-210ENST00000506042 OR52W1Q6IF63 320 aa16.99■□□□□ 0.31
SQSTM1-210ENST00000506042 LHFPL4Q7Z7J7 247 aa16.99■□□□□ 0.31
SQSTM1-210ENST00000506042 AQP12AQ8IXF9 295 aa16.99■□□□□ 0.31
SQSTM1-210ENST00000506042 PHF21AQ96BD5 680 aa16.99■□□□□ 0.31
SQSTM1-210ENST00000506042 CCDC124Q96CT7 223 aaKnown RBP16.99■□□□□ 0.31
SQSTM1-210ENST00000506042 CITED2Q99967 270 aaPredicted RBP16.99■□□□□ 0.31
SQSTM1-210ENST00000506042 GPR173Q9NS66 373 aa16.99■□□□□ 0.31
SQSTM1-210ENST00000506042 TVP23BQ9NYZ1 205 aa16.99■□□□□ 0.31
SQSTM1-210ENST00000506042 PCDHGB5Q9Y5G0 923 aa16.99■□□□□ 0.31
SQSTM1-210ENST00000506042 R4GMQ9 66 aa16.99■□□□□ 0.31
SQSTM1-210ENST00000506042 FUOMA2VDF0 154 aa16.98■□□□□ 0.31
SQSTM1-210ENST00000506042 IGLV3-1P01715 115 aa16.98■□□□□ 0.31
SQSTM1-210ENST00000506042 IGHV1-8P0DP01 117 aa16.98■□□□□ 0.31
SQSTM1-210ENST00000506042 SLC2A5P22732 501 aa16.98■□□□□ 0.31
SQSTM1-210ENST00000506042 PEX2P28328 305 aa16.98■□□□□ 0.31
SQSTM1-210ENST00000506042 COL10A1Q03692 680 aa16.98■□□□□ 0.31
SQSTM1-210ENST00000506042 ZNF322Q6U7Q0 402 aaPredicted RBP16.98■□□□□ 0.31
SQSTM1-210ENST00000506042 CENPVQ7Z7K6 275 aaPredicted RBP16.98■□□□□ 0.31
SQSTM1-210ENST00000506042 TMEM219Q86XT9 240 aa16.98■□□□□ 0.31
SQSTM1-210ENST00000506042 OR8H2Q8N162 312 aa16.98■□□□□ 0.31
SQSTM1-210ENST00000506042 ZNF676Q8N7Q3 588 aa16.98■□□□□ 0.31
SQSTM1-210ENST00000506042 OR4X2Q8NGF9 303 aa16.98■□□□□ 0.31
SQSTM1-210ENST00000506042 PIFOQ8TCI5 191 aa16.98■□□□□ 0.31
SQSTM1-210ENST00000506042 CREB3L1Q96BA8 519 aa16.98■□□□□ 0.31
SQSTM1-210ENST00000506042 CEP19Q96LK0 163 aa16.98■□□□□ 0.31
SQSTM1-210ENST00000506042 ZNF488Q96MN9 340 aa16.98■□□□□ 0.31
SQSTM1-210ENST00000506042 HES4Q9HCC6 221 aa16.98■□□□□ 0.31
SQSTM1-210ENST00000506042 AURKAIP1Q9NWT8 199 aaPredicted RBP16.98■□□□□ 0.31
SQSTM1-210ENST00000506042 TAS2R1Q9NYW7 299 aa16.98■□□□□ 0.31
SQSTM1-210ENST00000506042 ENOPH1Q9UHY7 261 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms