RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 PSKH1P11801 424 aa5.45□□□□□ -1.54
VCAN-206ENST00000505615 MALP21145 153 aa5.45□□□□□ -1.54
VCAN-206ENST00000505615 DDOSTP39656 456 aa5.45□□□□□ -1.54
VCAN-206ENST00000505615 GPR4P46093 362 aa5.45□□□□□ -1.54
VCAN-206ENST00000505615 MRPL19P49406 292 aaKnown RBP5.45□□□□□ -1.54
VCAN-206ENST00000505615 OR12D2P58182 307 aa5.45□□□□□ -1.54
VCAN-206ENST00000505615 FAM3AP98173 230 aa5.45□□□□□ -1.54
VCAN-206ENST00000505615 PRKCDQ05655 676 aa5.45□□□□□ -1.54
VCAN-206ENST00000505615 STX3Q13277 289 aa5.45□□□□□ -1.54
VCAN-206ENST00000505615 RAB32Q13637 225 aa5.45□□□□□ -1.54
VCAN-206ENST00000505615 FAM76BQ5HYJ3 339 aa5.45□□□□□ -1.54
VCAN-206ENST00000505615 C9orf152Q5JTZ5 239 aa5.45□□□□□ -1.54
VCAN-206ENST00000505615 PET117Q6UWS5 81 aa5.45□□□□□ -1.54
VCAN-206ENST00000505615 DRAM2Q6UX65 266 aa5.45□□□□□ -1.54
VCAN-206ENST00000505615 TMPRSS11FQ6ZWK6 438 aa5.45□□□□□ -1.54
VCAN-206ENST00000505615 CCDC80Q76M96 950 aa5.45□□□□□ -1.54
VCAN-206ENST00000505615 TCF23Q7RTU1 214 aa5.45□□□□□ -1.54
VCAN-206ENST00000505615 SLC16A9Q7RTY1 509 aa5.45□□□□□ -1.54
VCAN-206ENST00000505615 ADCK1Q86TW2 530 aa5.45□□□□□ -1.54
VCAN-206ENST00000505615 SATL1Q86VE3 508 aa5.45□□□□□ -1.54
VCAN-206ENST00000505615 Q8N1Y9 231 aa5.45□□□□□ -1.54
VCAN-206ENST00000505615 CD177Q8N6Q3 437 aa5.45□□□□□ -1.54
VCAN-206ENST00000505615 OR13D1Q8NGV5 346 aa5.45□□□□□ -1.54
VCAN-206ENST00000505615 SPDL1Q96EA4 605 aa5.45□□□□□ -1.54
VCAN-206ENST00000505615 AKR1E2Q96JD6 320 aa5.45□□□□□ -1.54
VCAN-206ENST00000505615 GPX7Q96SL4 187 aaPredicted RBP5.45□□□□□ -1.54
VCAN-206ENST00000505615 OPA3Q9H6K4 179 aa5.45□□□□□ -1.54
VCAN-206ENST00000505615 YY1AP1Q9H869 796 aa5.45□□□□□ -1.54
VCAN-206ENST00000505615 NRIP3Q9NQ35 241 aa5.45□□□□□ -1.54
VCAN-206ENST00000505615 AP5S1Q9NUS5 200 aa5.45□□□□□ -1.54
VCAN-206ENST00000505615 HSF4Q9ULV5 492 aa5.45□□□□□ -1.54
VCAN-206ENST00000505615 HHLA2Q9UM44 414 aa5.45□□□□□ -1.54
VCAN-206ENST00000505615 A4GNTQ9UNA3 340 aa5.45□□□□□ -1.54
VCAN-206ENST00000505615 SH3GLB1Q9Y371 365 aa5.45□□□□□ -1.54
VCAN-206ENST00000505615 RHBDD3Q9Y3P4 386 aa5.45□□□□□ -1.54
VCAN-206ENST00000505615 HERC1Q15751 4861 aa5.45□□□□□ -1.54
VCAN-206ENST00000505615 DYNC1H1Q14204 4646 aaKnown RBP5.44□□□□□ -1.54
VCAN-206ENST00000505615 hCG_1809904A0A1W2PP81 198 aa5.44□□□□□ -1.54
VCAN-206ENST00000505615 A0A1W2PPE2 198 aa5.44□□□□□ -1.54
VCAN-206ENST00000505615 A0A1W2PR64 198 aa5.44□□□□□ -1.54
VCAN-206ENST00000505615 A0A1W2PRV1 198 aa5.44□□□□□ -1.54
VCAN-206ENST00000505615 ZNF320A2RRD8 509 aa5.44□□□□□ -1.54
VCAN-206ENST00000505615 XRCC2O43543 280 aa5.44□□□□□ -1.54
VCAN-206ENST00000505615 MTRF1O75570 445 aaKnown RBP5.44□□□□□ -1.54
VCAN-206ENST00000505615 TXNDC12O95881 172 aa5.44□□□□□ -1.54
VCAN-206ENST00000505615 RBP4P02753 201 aa5.44□□□□□ -1.54
VCAN-206ENST00000505615 SPNP16150 400 aa5.44□□□□□ -1.54
VCAN-206ENST00000505615 GLRA1P23415 457 aa5.44□□□□□ -1.54
VCAN-206ENST00000505615 CRABP1P29762 137 aa5.44□□□□□ -1.54
VCAN-206ENST00000505615 OR1E2P47887 323 aa5.44□□□□□ -1.54
VCAN-206ENST00000505615 CENPAP49450 140 aa5.44□□□□□ -1.54
VCAN-206ENST00000505615 GZMMP51124 257 aa5.44□□□□□ -1.54
VCAN-206ENST00000505615 CAPZA1P52907 286 aa5.44□□□□□ -1.54
VCAN-206ENST00000505615 MTPNP58546 118 aa5.44□□□□□ -1.54
VCAN-206ENST00000505615 FXYD6P3P58550 94 aa5.44□□□□□ -1.54
VCAN-206ENST00000505615 ROM1Q03395 351 aa5.44□□□□□ -1.54
VCAN-206ENST00000505615 DYNC1I2Q13409 638 aaKnown RBP5.44□□□□□ -1.54
VCAN-206ENST00000505615 KIR2DS1Q14954 304 aa5.44□□□□□ -1.54
VCAN-206ENST00000505615 CYP51A1Q16850 503 aa5.44□□□□□ -1.54
VCAN-206ENST00000505615 ZBED5Q49AG3 693 aa5.44□□□□□ -1.54
VCAN-206ENST00000505615 AGBL2Q5U5Z8 902 aa5.44□□□□□ -1.54
VCAN-206ENST00000505615 LCN8Q6JVE9 175 aa5.44□□□□□ -1.54
VCAN-206ENST00000505615 WDR73Q6P4I2 378 aa5.44□□□□□ -1.54
VCAN-206ENST00000505615 CALHM1Q8IU99 346 aa5.44□□□□□ -1.54
VCAN-206ENST00000505615 MNS1Q8NEH6 495 aa5.44□□□□□ -1.54
VCAN-206ENST00000505615 OR4P4Q8NGL7 312 aa5.44□□□□□ -1.54
VCAN-206ENST00000505615 OR2T27Q8NH04 317 aa5.44□□□□□ -1.54
VCAN-206ENST00000505615 OR8U1Q8NH10 309 aa5.44□□□□□ -1.54
VCAN-206ENST00000505615 CHPT1Q8WUD6 406 aa5.44□□□□□ -1.54
VCAN-206ENST00000505615 HPSE2Q8WWQ2 592 aa5.44□□□□□ -1.54
VCAN-206ENST00000505615 RAB24Q969Q5 203 aa5.44□□□□□ -1.54
VCAN-206ENST00000505615 SPTSSAQ969W0 71 aa5.44□□□□□ -1.54
VCAN-206ENST00000505615 RNFT2Q96EX2 444 aa5.44□□□□□ -1.54
VCAN-206ENST00000505615 PRRC1Q96M27 445 aa5.44□□□□□ -1.54
VCAN-206ENST00000505615 PAPOLGQ9BWT3 736 aaKnown RBP5.44□□□□□ -1.54
VCAN-206ENST00000505615 DCLRE1BQ9H816 532 aa5.44□□□□□ -1.54
VCAN-206ENST00000505615 SP140LQ9H930 580 aa5.44□□□□□ -1.54
VCAN-206ENST00000505615 HEYLQ9NQ87 328 aaPredicted RBP5.44□□□□□ -1.54
VCAN-206ENST00000505615 MRPL22Q9NWU5 206 aaKnown RBP5.44□□□□□ -1.54
VCAN-206ENST00000505615 LINC00527Q9UJ94 153 aa5.44□□□□□ -1.54
VCAN-206ENST00000505615 B9D1Q9UPM9 204 aa5.44□□□□□ -1.54
VCAN-206ENST00000505615 DNAH11Q96DT5 4516 aa5.44□□□□□ -1.54
VCAN-206ENST00000505615 VPS13DQ5THJ4 4388 aa5.44□□□□□ -1.54
VCAN-206ENST00000505615 IGHV2-26A0A0B4J1V2 119 aa5.43□□□□□ -1.54
VCAN-206ENST00000505615 MEX3AA1L020 520 aaKnown RBP5.43□□□□□ -1.54
VCAN-206ENST00000505615 ERICH4A6NGS2 130 aa5.43□□□□□ -1.54
VCAN-206ENST00000505615 RFPL4AA6NLU0 287 aa5.43□□□□□ -1.54
VCAN-206ENST00000505615 TMEM210A6NLX4 147 aa5.43□□□□□ -1.54
VCAN-206ENST00000505615 RFPL4AL1F8VTS6 287 aa5.43□□□□□ -1.54
VCAN-206ENST00000505615 TSPAN4O14817 238 aa5.43□□□□□ -1.54
VCAN-206ENST00000505615 SNNO75324 88 aaPredicted RBP5.43□□□□□ -1.54
VCAN-206ENST00000505615 LY6G6CO95867 125 aa5.43□□□□□ -1.54
VCAN-206ENST00000505615 ZNF728P0DKX0 622 aa5.43□□□□□ -1.54
VCAN-206ENST00000505615 IGHV4-30-4P0DP06 118 aa5.43□□□□□ -1.54
VCAN-206ENST00000505615 PIPP12273 146 aaPredicted RBP5.43□□□□□ -1.54
VCAN-206ENST00000505615 GP9P14770 177 aa5.43□□□□□ -1.54
VCAN-206ENST00000505615 RPS27P42677 84 aaKnown RBP5.43□□□□□ -1.54
VCAN-206ENST00000505615 INSL3P51460 131 aa5.43□□□□□ -1.54
VCAN-206ENST00000505615 PRKXP51817 358 aa5.43□□□□□ -1.54
VCAN-206ENST00000505615 SLC18A1P54219 525 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms