RNA–Protein interactions for RNA: ENST00000504627.1

SQSTM1-209, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-209ENST00000504627 SEC61A1P61619 476 aaKnown RBP15.08■□□□□ 0
SQSTM1-209ENST00000504627 ZNF92Q03936 586 aa15.08■□□□□ 0
SQSTM1-209ENST00000504627 DGUOKQ16854 277 aa15.08■□□□□ 0
SQSTM1-209ENST00000504627 ZBTB37Q5TC79 503 aa15.08■□□□□ 0
SQSTM1-209ENST00000504627 C22orf15Q8WYQ4 148 aa15.08■□□□□ 0
SQSTM1-209ENST00000504627 SLC25A46Q96AG3 418 aa15.08■□□□□ 0
SQSTM1-209ENST00000504627 MRI1Q9BV20 369 aa15.08■□□□□ 0
SQSTM1-209ENST00000504627 TCF7L1Q9HCS4 588 aa15.08■□□□□ 0
SQSTM1-209ENST00000504627 AUP1Q9Y679 476 aa15.08■□□□□ 0
SQSTM1-209ENST00000504627 A0A1W2PPK0 400 aa15.07■□□□□ 0
SQSTM1-209ENST00000504627 CEACAM18A8MTB9 384 aa15.07■□□□□ 0
SQSTM1-209ENST00000504627 TRAPPC2LH3BP13 241 aa15.07■□□□□ 0
SQSTM1-209ENST00000504627 PDCD5O14737 125 aa15.07■□□□□ 0
SQSTM1-209ENST00000504627 RPS2P15880 293 aaKnown RBP15.07■□□□□ 0
SQSTM1-209ENST00000504627 IGFBP3P17936 291 aaPredicted RBP15.07■□□□□ 0
SQSTM1-209ENST00000504627 SRMP19623 302 aa15.07■□□□□ 0
SQSTM1-209ENST00000504627 MAP2K3P46734 347 aa15.07■□□□□ 0
SQSTM1-209ENST00000504627 PPP3R1P63098 170 aa15.07■□□□□ 0
SQSTM1-209ENST00000504627 FAM3AP98173 230 aa15.07■□□□□ 0
SQSTM1-209ENST00000504627 ZNF154Q13106 437 aa15.07■□□□□ 0
SQSTM1-209ENST00000504627 CROCCP3Q8IVE0 287 aa15.07■□□□□ 0
SQSTM1-209ENST00000504627 SERPINA12Q8IW75 414 aa15.07■□□□□ 0
SQSTM1-209ENST00000504627 PP6455Q8WZ26 134 aa15.07■□□□□ 0
SQSTM1-209ENST00000504627 ADAT3Q96EY9 351 aaPredicted RBP15.07■□□□□ 0
SQSTM1-209ENST00000504627 CHST5Q9GZS9 411 aa15.07■□□□□ 0
SQSTM1-209ENST00000504627 TAS2R4Q9NYW5 299 aa15.07■□□□□ 0
SQSTM1-209ENST00000504627 POLR3KQ9Y2Y1 108 aaPredicted RBP15.07■□□□□ 0
SQSTM1-209ENST00000504627 TRAV8-7A0A075B6U6 113 aa15.06■□□□□ 0
SQSTM1-209ENST00000504627 F5H0A9 414 aaPredicted RBP15.06■□□□□ 0
SQSTM1-209ENST00000504627 RAB3BP20337 219 aa15.06■□□□□ 0
SQSTM1-209ENST00000504627 RPS19P39019 145 aaKnown RBP15.06■□□□□ 0
SQSTM1-209ENST00000504627 GSK3AP49840 483 aa15.06■□□□□ 0
SQSTM1-209ENST00000504627 MXD1Q05195 221 aa15.06■□□□□ 0
SQSTM1-209ENST00000504627 RIPPLY1Q0D2K3 151 aa15.06■□□□□ 0
SQSTM1-209ENST00000504627 OR8G1Q15617 311 aa15.06■□□□□ 0
SQSTM1-209ENST00000504627 ZNF181Q2M3W8 571 aa15.06■□□□□ 0
SQSTM1-209ENST00000504627 ASPHD2Q6ICH7 369 aa15.06■□□□□ 0
SQSTM1-209ENST00000504627 ZNF529Q6P280 563 aa15.06■□□□□ 0
SQSTM1-209ENST00000504627 RBMS3Q6XE24 437 aaKnown RBP15.06■□□□□ 0
SQSTM1-209ENST00000504627 UTS2BQ765I0 119 aa15.06■□□□□ 0
SQSTM1-209ENST00000504627 NKAIN3Q8N8D7 197 aa15.06■□□□□ 0
SQSTM1-209ENST00000504627 DEFB108BQ8NET1 73 aa15.06■□□□□ 0
SQSTM1-209ENST00000504627 OR11L1Q8NGX0 322 aa15.06■□□□□ 0
SQSTM1-209ENST00000504627 GCDHQ92947 438 aaPredicted RBP15.06■□□□□ 0
SQSTM1-209ENST00000504627 FGGYQ96C11 551 aa15.06■□□□□ 0
SQSTM1-209ENST00000504627 TMEM165Q9HC07 324 aa15.06■□□□□ 0
SQSTM1-209ENST00000504627 MIOXQ9UGB7 285 aa15.06■□□□□ 0
SQSTM1-209ENST00000504627 NOP16Q9Y3C1 178 aaKnown RBP15.06■□□□□ 0
SQSTM1-209ENST00000504627 INSIG2Q9Y5U4 225 aa15.06■□□□□ 0
SQSTM1-209ENST00000504627 A3GALT2U3KPV4 340 aa15.06■□□□□ 0
SQSTM1-209ENST00000504627 ANKRD61A6NGH8 418 aa15.05■□□□□ -0
SQSTM1-209ENST00000504627 GGT3PA6NGU5 568 aa15.05■□□□□ -0
SQSTM1-209ENST00000504627 A8MXK9 166 aa15.05■□□□□ -0
SQSTM1-209ENST00000504627 TMEM127O75204 238 aa15.05■□□□□ -0
SQSTM1-209ENST00000504627 WNT2P09544 360 aa15.05■□□□□ -0
SQSTM1-209ENST00000504627 CPT2P23786 658 aa15.05■□□□□ -0
SQSTM1-209ENST00000504627 ACKR3P25106 362 aa15.05■□□□□ -0
SQSTM1-209ENST00000504627 GNALP38405 381 aa15.05■□□□□ -0
SQSTM1-209ENST00000504627 DDOSTP39656 456 aa15.05■□□□□ -0
SQSTM1-209ENST00000504627 RORCP51449 518 aa15.05■□□□□ -0
SQSTM1-209ENST00000504627 PSMD7P51665 324 aa15.05■□□□□ -0
SQSTM1-209ENST00000504627 GNB2P62879 340 aa15.05■□□□□ -0
SQSTM1-209ENST00000504627 LRRTM1Q86UE6 522 aa15.05■□□□□ -0
SQSTM1-209ENST00000504627 FTMTQ8N4E7 242 aa15.05■□□□□ -0
SQSTM1-209ENST00000504627 CELF2-AS1Q8N7Q2 184 aa15.05■□□□□ -0
SQSTM1-209ENST00000504627 CSNK2A3Q8NEV1 391 aa15.05■□□□□ -0
SQSTM1-209ENST00000504627 OR5D14Q8NGL3 314 aa15.05■□□□□ -0
SQSTM1-209ENST00000504627 FAM216AQ8WUB2 273 aa15.05■□□□□ -0
SQSTM1-209ENST00000504627 AP3S1Q92572 193 aa15.05■□□□□ -0
SQSTM1-209ENST00000504627 ERGIC1Q969X5 290 aa15.05■□□□□ -0
SQSTM1-209ENST00000504627 ORAI1Q96D31 301 aa15.05■□□□□ -0
SQSTM1-209ENST00000504627 SSBP3Q9BWW4 388 aaPredicted RBP15.05■□□□□ -0
SQSTM1-209ENST00000504627 SLIRPQ9GZT3 109 aaKnown RBP15.05■□□□□ -0
SQSTM1-209ENST00000504627 SLC22A4Q9H015 551 aa15.05■□□□□ -0
SQSTM1-209ENST00000504627 ZCCHC4Q9H5U6 513 aa15.05■□□□□ -0
SQSTM1-209ENST00000504627 UFSP2Q9NUQ7 469 aa15.05■□□□□ -0
SQSTM1-209ENST00000504627 PIGLQ9Y2B2 252 aa15.05■□□□□ -0
SQSTM1-209ENST00000504627 PPIAL4AQ9Y536 164 aa15.05■□□□□ -0
SQSTM1-209ENST00000504627 A0A0G2JK05 382 aa15.04■□□□□ -0
SQSTM1-209ENST00000504627 ZNF816-ZNF321PA0A0X1KG74 233 aa15.04■□□□□ -0
SQSTM1-209ENST00000504627 MEGF11A6BM72 1044 aa15.04■□□□□ -0
SQSTM1-209ENST00000504627 CD300LBA8K4G0 201 aa15.04■□□□□ -0
SQSTM1-209ENST00000504627 NOTOA8MTQ0 251 aa15.04■□□□□ -0
SQSTM1-209ENST00000504627 ALX3O95076 343 aa15.04■□□□□ -0
SQSTM1-209ENST00000504627 FSHBP01225 129 aa15.04■□□□□ -0
SQSTM1-209ENST00000504627 CLEC2LP0C7M8 214 aa15.04■□□□□ -0
SQSTM1-209ENST00000504627 FAHP16930 419 aa15.04■□□□□ -0
SQSTM1-209ENST00000504627 RAB3AP20336 220 aa15.04■□□□□ -0
SQSTM1-209ENST00000504627 CA6P23280 308 aa15.04■□□□□ -0
SQSTM1-209ENST00000504627 CFPP27918 469 aa15.04■□□□□ -0
SQSTM1-209ENST00000504627 GATA4P43694 442 aa15.04■□□□□ -0
SQSTM1-209ENST00000504627 MAB21L1Q13394 359 aa15.04■□□□□ -0
SQSTM1-209ENST00000504627 CEP78Q5JTW2 689 aa15.04■□□□□ -0
SQSTM1-209ENST00000504627 PRAMEF6Q5VXH4 476 aa15.04■□□□□ -0
SQSTM1-209ENST00000504627 SFXN4Q6P4A7 337 aa15.04■□□□□ -0
SQSTM1-209ENST00000504627 BTNL3Q6UXE8 466 aa15.04■□□□□ -0
SQSTM1-209ENST00000504627 NLRC3Q7RTR2 1065 aa15.04■□□□□ -0
SQSTM1-209ENST00000504627 KRT74Q7RTS7 529 aa15.04■□□□□ -0
SQSTM1-209ENST00000504627 OR8B3Q8NGG8 313 aa15.04■□□□□ -0
SQSTM1-209ENST00000504627 OR56B2PQ8NGI1 322 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms