RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 SCN10AQ9Y5Y9 1956 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 PALLDQ8WX93 1383 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 MAP1LC3B2A6NCE7 125 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 AIFM1O95831 613 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 RAB5AP20339 215 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 RPA3P35244 121 aaPredicted RBP4.19□□□□□ -1.74
NIPBL-204ENST00000504430 AKR1D1P51857 326 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 RHOBP62745 196 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 TCP10Q12799 353 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 MESTQ5EB52 335 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 KDM4DQ6B0I6 523 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.19□□□□□ -1.74
NIPBL-204ENST00000504430 DNAJC9Q8WXX5 260 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 ZHX1-C8orf76Q96EF9 292 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 ZNF354BQ96LW1 612 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 SLC29A3Q9BZD2 475 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 MAP1LC3BQ9GZQ8 125 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 RIMS2Q9UQ26 1411 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 SCN5AQ14524 2016 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 MYH2Q9UKX2 1941 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 IGHV2OR16-5A0A0B4J2B6 119 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 SLC17A2O00624 439 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 CRXO43186 299 aaPredicted RBP4.19□□□□□ -1.74
NIPBL-204ENST00000504430 GCM2O75603 506 aaPredicted RBP4.19□□□□□ -1.74
NIPBL-204ENST00000504430 WT1P19544 449 aaPredicted RBP4.19□□□□□ -1.74
NIPBL-204ENST00000504430 PPICP45877 212 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 SELENOPP49908 381 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 RAB13P51153 203 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 ZNF92Q03936 586 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 BAXQ07812 192 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 ARTNQ5T4W7 220 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 SYCE2Q6PIF2 218 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 SPSB3Q6PJ21 355 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 SLC22A18ASQ8N1D0 253 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 SVOPLQ8N434 492 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 ZNF614Q8N883 585 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 OR1S1Q8NH92 325 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 TCEAL3Q969E4 200 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 C12orf43Q96C57 262 aaKnown RBP4.19□□□□□ -1.74
NIPBL-204ENST00000504430 TMEM80Q96HE8 168 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 BIN3Q9NQY0 253 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 SPHK2Q9NRA0 654 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 RBFOX1Q9NWB1 397 aaKnown RBP4.19□□□□□ -1.74
NIPBL-204ENST00000504430 RBM7Q9Y580 266 aaKnown RBP4.19□□□□□ -1.74
NIPBL-204ENST00000504430 HECW2Q9P2P5 1572 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 SCRIBQ14160 1630 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 LINC01548A6NM66 108 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 C8orf87E5RJ46 101 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 J3QT63 122 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 TYROBPO43914 113 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 RBP1P09455 135 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 ELF3P78545 371 aaPredicted RBP4.18□□□□□ -1.74
NIPBL-204ENST00000504430 SLC7A9P82251 487 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 C10orf25Q5T742 122 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 FOXL2NBQ6ZUU3 175 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 NEGR1Q7Z3B1 354 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 BLNKQ8WV28 456 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 ACOT12Q8WYK0 555 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 FXYD5Q96DB9 178 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 EMC6Q9BV81 110 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 RPF2Q9H7B2 306 aaKnown RBP4.18□□□□□ -1.74
NIPBL-204ENST00000504430 LRTM1Q9HBL6 345 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 MYH15Q9Y2K3 1946 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 COL22A1Q8NFW1 1626 aaPredicted RBP4.18□□□□□ -1.74
NIPBL-204ENST00000504430 A0A1B0GWB2 263 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 BHLHE40O14503 412 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 RFX2P48378 723 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 RND3P61587 244 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 SLC35A2P78381 396 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 PUDPQ08623 228 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 ANGPTL5Q86XS5 388 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 OR4P4Q8NGL7 312 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 PTX4Q96A99 478 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 RCN3Q96D15 328 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 FMC1Q96HJ9 113 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 IP6K3Q96PC2 410 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 GGACTQ9BVM4 153 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 KIFC1Q9BW19 673 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 CISHQ9NSE2 258 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 IL36RNQ9UBH0 155 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 SELENOKQ9Y6D0 94 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 KIAA1210Q9ULL0 1709 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 TEX48A0A1B0GUV7 120 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 H7C417 338 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 HMGB3O15347 200 aaKnown RBP4.18□□□□□ -1.74
NIPBL-204ENST00000504430 CRLF1O75462 422 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 ATG12O94817 140 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 CD48P09326 243 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 ELK3P41970 407 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 KLK7P49862 253 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 ACOT6Q3I5F7 207 aaPredicted RBP4.18□□□□□ -1.74
NIPBL-204ENST00000504430 DCUN1D2Q6PH85 259 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 RFLNBQ8N5W9 214 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 ZNF300Q96RE9 604 aaPredicted RBP4.18□□□□□ -1.74
NIPBL-204ENST00000504430 MTFP1Q9UDX5 166 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 ORC6Q9Y5N6 252 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 CAMTA1Q9Y6Y1 1673 aa4.18□□□□□ -1.74
NIPBL-204ENST00000504430 C9orf170A2RU37 121 aa4.17□□□□□ -1.74
NIPBL-204ENST00000504430 TRABD2BA6NFA1 517 aa4.17□□□□□ -1.74
NIPBL-204ENST00000504430 CRYGDP07320 174 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms