RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 OR2AT4A6NND4 320 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 E9PLD3 99 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 J3QLI3 93 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 K7EQS6 105 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 FGF16O43320 207 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 ZNF749O43361 778 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 MPZL2O60487 215 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 TBX6O95947 436 aaPredicted RBP3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 HPRT1P00492 218 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 IFNA14P01570 189 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 RLN2P04090 185 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 ISG15P05161 165 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 CISD3P0C7P0 127 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 LIMS3P0CW19 117 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 LIMS4P0CW20 117 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 C8orf88P0DMB2 117 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 TDGF1P13385 188 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 GNRHRP30968 328 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 NTSP30990 170 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 RPA3P35244 121 aaPredicted RBP3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 DCTP40126 519 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 RPS9P46781 194 aaKnown RBP3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 IDH3GP51553 393 aaPredicted RBP3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 SUB1P53999 127 aaKnown RBP eCLIP3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 PAX9P55771 341 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 AP1S2P56377 157 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 TAS2R31P59538 309 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 RAB8AP61006 207 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 AESQ08117 197 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 GUSBP1Q15486 140 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 TRAM1Q15629 374 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 TMEM176BQ3YBM2 270 aaPredicted RBP3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 OR10J3Q5JRS4 329 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 GPRC6AQ5T6X5 926 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 OLFML2AQ68BL7 652 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 HBMQ6B0K9 141 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 C4orf22Q6V702 233 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 Q6ZS52 159 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 STRADAQ7RTN6 431 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 WDFY1Q8IWB7 410 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 ABCA7Q8IZY2 2146 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 RIBC1Q8N443 379 aaPredicted RBP3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 CCNYL1Q8N7R7 359 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 OR8G5Q8NG78 346 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 OR52B6Q8NGF0 335 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 OR10G7Q8NGN6 311 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 OR2AE1Q8NHA4 323 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 JOSD2Q8TAC2 188 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 PIGXQ8TBF5 258 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 SYNPRQ8TBG9 265 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 ACTRT1Q8TDG2 376 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 BLOC1S5Q8TDH9 187 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 FAM222BQ8WU58 562 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 APH1BQ8WW43 257 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 RASL10AQ92737 203 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 HAUS1Q96CS2 278 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 DGCR14Q96DF8 476 aaKnown RBP3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 ZNF486Q96H40 463 aaPredicted RBP3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 ZNF681Q96N22 645 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 RILPQ96NA2 401 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 PRAP1Q96NZ9 151 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 RARRES2Q99969 163 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 KLHDC3Q9BQ90 382 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 NXF2Q9GZY0 626 aaKnown RBP3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 ARL6Q9H0F7 186 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 METTL9Q9H1A3 318 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 OR51J1Q9H342 316 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 ZNF442Q9H7R0 627 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 IL1RAPQ9NPH3 570 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 KCNIP1Q9NZI2 227 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 TMEM181Q9P2C4 612 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 OPN4Q9UHM6 478 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 ZNF107Q9UII5 783 aaPredicted RBP3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 SNX12Q9UMY4 172 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 NDRG2Q9UN36 371 aaKnown RBP3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 TIMM22Q9Y584 194 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 FBN3Q75N90 2809 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 NUMA1Q14980 2115 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 NCOR2Q9Y618 2525 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 DOCK4Q8N1I0 1966 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 ZNF816-ZNF321PA0A0X1KG74 233 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 CXorf51AA0A1B0GTR3 108 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 SLC5A10A0PJK1 596 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 A6NDN8 102 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 TMEM238C9JI98 176 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 F5H768 121 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 NME4O00746 187 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 PFDN6O15212 129 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 PHF1O43189 567 aaPredicted RBP3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 SHOX2O60902 331 aaPredicted RBP3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 ICOSLGO75144 302 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 SRP72O76094 671 aaKnown RBP3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 OXTP01178 125 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 IGHV3-9P01782 118 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 TCRBP04435 133 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 HOXC4P09017 264 aaPredicted RBP3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 F8A1P23610 371 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 SHMT2P34897 504 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 HRH1P35367 487 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms