RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 VMACQ2NL98 169 aa9.67□□□□□ -0.86
LSM6-204ENST00000504181 CEP78Q5JTW2 689 aa9.67□□□□□ -0.86
LSM6-204ENST00000504181 TPTE2P1Q5T6R2 138 aa9.67□□□□□ -0.86
LSM6-204ENST00000504181 HAGHLQ6PII5 290 aaPredicted RBP9.67□□□□□ -0.86
LSM6-204ENST00000504181 LYPD4Q6UWN0 246 aa9.67□□□□□ -0.86
LSM6-204ENST00000504181 DPY19L2P2Q6ZN68 376 aa9.67□□□□□ -0.86
LSM6-204ENST00000504181 RNF113BQ8IZP6 322 aaKnown RBP9.67□□□□□ -0.86
LSM6-204ENST00000504181 OFCC1Q8IZS5 231 aa9.67□□□□□ -0.86
LSM6-204ENST00000504181 ABHD12Q8N2K0 398 aa9.67□□□□□ -0.86
LSM6-204ENST00000504181 POC1AQ8NBT0 407 aa9.67□□□□□ -0.86
LSM6-204ENST00000504181 OR4K13Q8NH42 304 aa9.67□□□□□ -0.86
LSM6-204ENST00000504181 TRMT10AQ8TBZ6 339 aaKnown RBP9.67□□□□□ -0.86
LSM6-204ENST00000504181 ZNF596Q8TC21 504 aa9.67□□□□□ -0.86
LSM6-204ENST00000504181 DLX4Q92988 240 aaPredicted RBP9.67□□□□□ -0.86
LSM6-204ENST00000504181 HIST1H2AAQ96QV6 131 aa9.67□□□□□ -0.86
LSM6-204ENST00000504181 FNDC11Q9BVV2 318 aa9.67□□□□□ -0.86
LSM6-204ENST00000504181 GON7Q9BXV9 100 aa9.67□□□□□ -0.86
LSM6-204ENST00000504181 GHITMQ9H3K2 345 aa9.67□□□□□ -0.86
LSM6-204ENST00000504181 KAT8Q9H7Z6 458 aaKnown RBP9.67□□□□□ -0.86
LSM6-204ENST00000504181 BRD7Q9NPI1 651 aa9.67□□□□□ -0.86
LSM6-204ENST00000504181 DNAJC27Q9NZQ0 273 aa9.67□□□□□ -0.86
LSM6-204ENST00000504181 ZNF319Q9P2F9 582 aa9.67□□□□□ -0.86
LSM6-204ENST00000504181 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.67□□□□□ -0.86
LSM6-204ENST00000504181 DNAH6Q9C0G6 4158 aa9.67□□□□□ -0.86
LSM6-204ENST00000504181 ZNF878C9JN71 531 aa9.66□□□□□ -0.86
LSM6-204ENST00000504181 I3L521 148 aa9.66□□□□□ -0.86
LSM6-204ENST00000504181 SERPINA1P01009 418 aa9.66□□□□□ -0.86
LSM6-204ENST00000504181 CST4P01036 141 aa9.66□□□□□ -0.86
LSM6-204ENST00000504181 PYCR1P32322 319 aa9.66□□□□□ -0.86
LSM6-204ENST00000504181 CEACAM3P40198 252 aa9.66□□□□□ -0.86
LSM6-204ENST00000504181 SLURP1P55000 103 aa9.66□□□□□ -0.86
LSM6-204ENST00000504181 GNG3P63215 75 aa9.66□□□□□ -0.86
LSM6-204ENST00000504181 EDDM3AQ14507 147 aa9.66□□□□□ -0.86
LSM6-204ENST00000504181 MREGQ8N565 214 aa9.66□□□□□ -0.86
LSM6-204ENST00000504181 TPRX1Q8N7U7 411 aa9.66□□□□□ -0.86
LSM6-204ENST00000504181 OR56B4Q8NH76 319 aa9.66□□□□□ -0.86
LSM6-204ENST00000504181 ARPC1AQ92747 370 aa9.66□□□□□ -0.86
LSM6-204ENST00000504181 RSRC1Q96IZ7 334 aaKnown RBP9.66□□□□□ -0.86
LSM6-204ENST00000504181 TPD52L3Q96J77 140 aa9.66□□□□□ -0.86
LSM6-204ENST00000504181 CGREF1Q99674 301 aa9.66□□□□□ -0.86
LSM6-204ENST00000504181 PAIP2Q9BPZ3 127 aaKnown RBP9.66□□□□□ -0.86
LSM6-204ENST00000504181 NRIP2Q9BQI9 281 aa9.66□□□□□ -0.86
LSM6-204ENST00000504181 TMED9Q9BVK6 235 aa9.66□□□□□ -0.86
LSM6-204ENST00000504181 TUBA4BQ9H853 241 aa9.66□□□□□ -0.86
LSM6-204ENST00000504181 NUPR2A6NF83 97 aa9.65□□□□□ -0.86
LSM6-204ENST00000504181 HSPA12AO43301 675 aa9.65□□□□□ -0.86
LSM6-204ENST00000504181 NXPH2O95156 264 aa9.65□□□□□ -0.86
LSM6-204ENST00000504181 IGLV1-47P01700 117 aa9.65□□□□□ -0.86
LSM6-204ENST00000504181 SPARCP09486 303 aa9.65□□□□□ -0.86
LSM6-204ENST00000504181 HIST1H1CP16403 213 aaKnown RBP9.65□□□□□ -0.86
LSM6-204ENST00000504181 HSD11B1P28845 292 aa9.65□□□□□ -0.86
LSM6-204ENST00000504181 GPR12P47775 334 aa9.65□□□□□ -0.86
LSM6-204ENST00000504181 IFFO1Q0D2I5 559 aa9.65□□□□□ -0.86
LSM6-204ENST00000504181 RBM39Q14498 530 aaKnown RBP9.65□□□□□ -0.86
LSM6-204ENST00000504181 PRAMEF5Q5TYX0 476 aa9.65□□□□□ -0.86
LSM6-204ENST00000504181 CCDC144NLQ6NUI1 221 aa9.65□□□□□ -0.86
LSM6-204ENST00000504181 ACSM6Q6P461 480 aa9.65□□□□□ -0.86
LSM6-204ENST00000504181 RRM2BQ7LG56 351 aa9.65□□□□□ -0.86
LSM6-204ENST00000504181 OR10A2Q9H208 303 aa9.65□□□□□ -0.86
LSM6-204ENST00000504181 SLC22A13Q9Y226 551 aa9.65□□□□□ -0.86
LSM6-204ENST00000504181 TMEM5Q9Y2B1 443 aa9.65□□□□□ -0.86
LSM6-204ENST00000504181 SNX13Q9Y5W8 968 aa9.65□□□□□ -0.86
LSM6-204ENST00000504181 LINC00312Q9Y6C7 94 aa9.65□□□□□ -0.86
LSM6-204ENST00000504181 FAT2Q9NYQ8 4349 aa9.65□□□□□ -0.87
LSM6-204ENST00000504181 DYNC1H1Q14204 4646 aaKnown RBP9.64□□□□□ -0.87
LSM6-204ENST00000504181 hADV38S2A0JD32 116 aa9.64□□□□□ -0.87
LSM6-204ENST00000504181 FAM90A18PA6NE21 464 aa9.64□□□□□ -0.87
LSM6-204ENST00000504181 FAM90A16PA6NEW6 464 aa9.64□□□□□ -0.87
LSM6-204ENST00000504181 FAM90A20PA6NIJ5 464 aa9.64□□□□□ -0.87
LSM6-204ENST00000504181 FAM90A9PA6NNJ1 464 aa9.64□□□□□ -0.87
LSM6-204ENST00000504181 FAM90A12PA8MX19 464 aa9.64□□□□□ -0.87
LSM6-204ENST00000504181 FAM90A5PA8MXJ8 464 aa9.64□□□□□ -0.87
LSM6-204ENST00000504181 BUB1B-PAK6H3BSN5 160 aa9.64□□□□□ -0.87
LSM6-204ENST00000504181 FFAR1O14842 300 aa9.64□□□□□ -0.87
LSM6-204ENST00000504181 ST8SIA5O15466 376 aa9.64□□□□□ -0.87
LSM6-204ENST00000504181 IGHG4P01861 327 aa9.64□□□□□ -0.87
LSM6-204ENST00000504181 FAM90A15PP0C7V4 464 aa9.64□□□□□ -0.87
LSM6-204ENST00000504181 FAM90A13PP0C7W8 464 aa9.64□□□□□ -0.87
LSM6-204ENST00000504181 FAM90A14PP0C7W9 464 aa9.64□□□□□ -0.87
LSM6-204ENST00000504181 FAM90A24PP0C7X0 464 aa9.64□□□□□ -0.87
LSM6-204ENST00000504181 PSMB8P28062 276 aa9.64□□□□□ -0.87
LSM6-204ENST00000504181 MRPL19P49406 292 aaKnown RBP9.64□□□□□ -0.87
LSM6-204ENST00000504181 GZMMP51124 257 aa9.64□□□□□ -0.87
LSM6-204ENST00000504181 ZNF121P58317 390 aaPredicted RBP9.64□□□□□ -0.87
LSM6-204ENST00000504181 ISL1P61371 349 aa9.64□□□□□ -0.87
LSM6-204ENST00000504181 ESRRGP62508 458 aa9.64□□□□□ -0.87
LSM6-204ENST00000504181 MEF2CQ06413 473 aaPredicted RBP9.64□□□□□ -0.87
LSM6-204ENST00000504181 HLA-DRB5Q30154 266 aa9.64□□□□□ -0.87
LSM6-204ENST00000504181 AGKQ53H12 422 aa9.64□□□□□ -0.87
LSM6-204ENST00000504181 CYBRD1Q53TN4 286 aa9.64□□□□□ -0.87
LSM6-204ENST00000504181 PRSS45Q7RTY3 260 aa9.64□□□□□ -0.87
LSM6-204ENST00000504181 RTN4RL2Q86UN3 420 aa9.64□□□□□ -0.87
LSM6-204ENST00000504181 THNSL2Q86YJ6 484 aa9.64□□□□□ -0.87
LSM6-204ENST00000504181 EIF1ADQ8N9N8 165 aaKnown RBP9.64□□□□□ -0.87
LSM6-204ENST00000504181 PGAM5Q96HS1 289 aa9.64□□□□□ -0.87
LSM6-204ENST00000504181 TMEM120AQ9BXJ8 343 aa9.64□□□□□ -0.87
LSM6-204ENST00000504181 ZNF286AQ9HBT8 521 aa9.64□□□□□ -0.87
LSM6-204ENST00000504181 THAP1Q9NVV9 213 aa9.64□□□□□ -0.87
LSM6-204ENST00000504181 LY6LH3BQJ8 138 aa9.63□□□□□ -0.87
LSM6-204ENST00000504181 SNNO75324 88 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms