RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 NRIP2Q9BQI9 281 aa12.49□□□□□ -0.41
PDLIM7-210ENST00000503827 SIKE1Q9BRV8 207 aa12.49□□□□□ -0.41
PDLIM7-210ENST00000503827 EGLN3Q9H6Z9 239 aa12.49□□□□□ -0.41
PDLIM7-210ENST00000503827 SCOCQ9UIL1 159 aa12.49□□□□□ -0.41
PDLIM7-210ENST00000503827 LYVE1Q9Y5Y7 322 aa12.49□□□□□ -0.41
PDLIM7-210ENST00000503827 NOS1APO75052 506 aaPredicted RBP12.48□□□□□ -0.41
PDLIM7-210ENST00000503827 SPI1P17947 270 aa12.48□□□□□ -0.41
PDLIM7-210ENST00000503827 CBX1P83916 185 aa12.48□□□□□ -0.41
PDLIM7-210ENST00000503827 MEF2CQ06413 473 aaPredicted RBP12.48□□□□□ -0.41
PDLIM7-210ENST00000503827 TSPAN31Q12999 210 aa12.48□□□□□ -0.41
PDLIM7-210ENST00000503827 KLF10Q13118 480 aa12.48□□□□□ -0.41
PDLIM7-210ENST00000503827 KRT74Q7RTS7 529 aa12.48□□□□□ -0.41
PDLIM7-210ENST00000503827 SLC15A3Q8IY34 581 aa12.48□□□□□ -0.41
PDLIM7-210ENST00000503827 ISOC1Q96CN7 298 aa12.48□□□□□ -0.41
PDLIM7-210ENST00000503827 C7orf34Q96L11 122 aa12.48□□□□□ -0.41
PDLIM7-210ENST00000503827 NOL4LQ96MY1 436 aaPredicted RBP12.48□□□□□ -0.41
PDLIM7-210ENST00000503827 INTS14Q96SY0 518 aa12.48□□□□□ -0.41
PDLIM7-210ENST00000503827 RAB21Q9UL25 225 aa12.48□□□□□ -0.41
PDLIM7-210ENST00000503827 SLC22A13Q9Y226 551 aa12.48□□□□□ -0.41
PDLIM7-210ENST00000503827 POLDIP2Q9Y2S7 368 aa12.48□□□□□ -0.41
PDLIM7-210ENST00000503827 SORL1Q92673 2214 aa12.47□□□□□ -0.41
PDLIM7-210ENST00000503827 hADV38S2A0JD32 116 aa12.47□□□□□ -0.41
PDLIM7-210ENST00000503827 SERPINE3A8MV23 424 aa12.47□□□□□ -0.41
PDLIM7-210ENST00000503827 JTBO76095 146 aa12.47□□□□□ -0.41
PDLIM7-210ENST00000503827 CLUP10909 449 aa12.47□□□□□ -0.41
PDLIM7-210ENST00000503827 HAAOP46952 286 aa12.47□□□□□ -0.41
PDLIM7-210ENST00000503827 CRMP1Q14194 572 aa12.47□□□□□ -0.41
PDLIM7-210ENST00000503827 PLCXD3Q63HM9 321 aa12.47□□□□□ -0.41
PDLIM7-210ENST00000503827 SHFQ7M4L6 423 aa12.47□□□□□ -0.41
PDLIM7-210ENST00000503827 OVCH2Q7RTZ1 564 aa12.47□□□□□ -0.41
PDLIM7-210ENST00000503827 ZNF573Q86YE8 665 aa12.47□□□□□ -0.41
PDLIM7-210ENST00000503827 ERI1Q8IV48 349 aaKnown RBP12.47□□□□□ -0.41
PDLIM7-210ENST00000503827 OR8B12Q8NGG6 310 aa12.47□□□□□ -0.41
PDLIM7-210ENST00000503827 OR4Q3Q8NH05 313 aa12.47□□□□□ -0.41
PDLIM7-210ENST00000503827 OR8U1Q8NH10 309 aa12.47□□□□□ -0.41
PDLIM7-210ENST00000503827 ZNF596Q8TC21 504 aa12.47□□□□□ -0.41
PDLIM7-210ENST00000503827 AMELYQ99218 206 aa12.47□□□□□ -0.41
PDLIM7-210ENST00000503827 NIPAL2Q9H841 368 aa12.47□□□□□ -0.41
PDLIM7-210ENST00000503827 HHLA2Q9UM44 414 aa12.47□□□□□ -0.41
PDLIM7-210ENST00000503827 MOB4Q9Y3A3 225 aa12.47□□□□□ -0.41
PDLIM7-210ENST00000503827 CDH10Q9Y6N8 788 aa12.47□□□□□ -0.41
PDLIM7-210ENST00000503827 HSPE1-MOB4S4R3N1 261 aa12.47□□□□□ -0.41
PDLIM7-210ENST00000503827 CSMD3Q7Z407 3707 aa12.47□□□□□ -0.41
PDLIM7-210ENST00000503827 HYDINQ4G0P3 5121 aa12.46□□□□□ -0.41
PDLIM7-210ENST00000503827 LEUTXA8MZ59 168 aa12.46□□□□□ -0.41
PDLIM7-210ENST00000503827 J3QT63 122 aa12.46□□□□□ -0.41
PDLIM7-210ENST00000503827 NCK1P16333 377 aa12.46□□□□□ -0.41
PDLIM7-210ENST00000503827 ZNF260Q3ZCT1 412 aa12.46□□□□□ -0.41
PDLIM7-210ENST00000503827 TCF23Q7RTU1 214 aa12.46□□□□□ -0.41
PDLIM7-210ENST00000503827 OR8H2Q8N162 312 aa12.46□□□□□ -0.41
PDLIM7-210ENST00000503827 BATF2Q8N1L9 274 aa12.46□□□□□ -0.41
PDLIM7-210ENST00000503827 RP9Q8TA86 221 aaKnown RBP12.46□□□□□ -0.41
PDLIM7-210ENST00000503827 ITFG2Q969R8 447 aa12.46□□□□□ -0.41
PDLIM7-210ENST00000503827 NMNAT2Q9BZQ4 307 aa12.46□□□□□ -0.41
PDLIM7-210ENST00000503827 HES4Q9HCC6 221 aa12.46□□□□□ -0.41
PDLIM7-210ENST00000503827 DCAF13Q9NV06 445 aaKnown RBP12.46□□□□□ -0.41
PDLIM7-210ENST00000503827 LINC00312Q9Y6C7 94 aa12.46□□□□□ -0.41
PDLIM7-210ENST00000503827 STARD9Q9P2P6 4700 aa12.46□□□□□ -0.42
PDLIM7-210ENST00000503827 FRMD6-AS1P0C7T7 363 aa12.45□□□□□ -0.42
PDLIM7-210ENST00000503827 CEACAM3P40198 252 aa12.45□□□□□ -0.42
PDLIM7-210ENST00000503827 NUDT2P50583 147 aa12.45□□□□□ -0.42
PDLIM7-210ENST00000503827 BDH1Q02338 343 aa12.45□□□□□ -0.42
PDLIM7-210ENST00000503827 EDDM3AQ14507 147 aa12.45□□□□□ -0.42
PDLIM7-210ENST00000503827 DEFB136Q30KP8 78 aa12.45□□□□□ -0.42
PDLIM7-210ENST00000503827 LINC01590Q5TEZ4 76 aa12.45□□□□□ -0.42
PDLIM7-210ENST00000503827 LCNL1Q6ZST4 164 aa12.45□□□□□ -0.42
PDLIM7-210ENST00000503827 KRT77Q7Z794 578 aa12.45□□□□□ -0.42
PDLIM7-210ENST00000503827 RTN4RL2Q86UN3 420 aa12.45□□□□□ -0.42
PDLIM7-210ENST00000503827 ABHD12Q8N2K0 398 aa12.45□□□□□ -0.42
PDLIM7-210ENST00000503827 DCLRE1BQ9H816 532 aa12.45□□□□□ -0.42
PDLIM7-210ENST00000503827 LINC00527Q9UJ94 153 aa12.45□□□□□ -0.42
PDLIM7-210ENST00000503827 SAMD4AQ9UPU9 718 aaKnown RBP12.45□□□□□ -0.42
PDLIM7-210ENST00000503827 SIRT4Q9Y6E7 314 aaPredicted RBP12.45□□□□□ -0.42
PDLIM7-210ENST00000503827 NME4O00746 187 aa12.44□□□□□ -0.42
PDLIM7-210ENST00000503827 GSC2O15499 205 aa12.44□□□□□ -0.42
PDLIM7-210ENST00000503827 ZNF737O75373 536 aa12.44□□□□□ -0.42
PDLIM7-210ENST00000503827 LYNP07948 512 aa12.44□□□□□ -0.42
PDLIM7-210ENST00000503827 FAM106CPP0CH98 169 aa12.44□□□□□ -0.42
PDLIM7-210ENST00000503827 ATP6V1B1P15313 513 aa12.44□□□□□ -0.42
PDLIM7-210ENST00000503827 MNDAP41218 407 aa12.44□□□□□ -0.42
PDLIM7-210ENST00000503827 PSMA6P60900 246 aaKnown RBP12.44□□□□□ -0.42
PDLIM7-210ENST00000503827 RIPPLY1Q0D2K3 151 aa12.44□□□□□ -0.42
PDLIM7-210ENST00000503827 KIR2DS1Q14954 304 aa12.44□□□□□ -0.42
PDLIM7-210ENST00000503827 ZNF684Q5T5D7 378 aa12.44□□□□□ -0.42
PDLIM7-210ENST00000503827 LCN1P1Q5VSP4 162 aa12.44□□□□□ -0.42
PDLIM7-210ENST00000503827 OR52W1Q6IF63 320 aa12.44□□□□□ -0.42
PDLIM7-210ENST00000503827 TEX38Q6PEX7 206 aa12.44□□□□□ -0.42
PDLIM7-210ENST00000503827 EGFL6Q8IUX8 553 aa12.44□□□□□ -0.42
PDLIM7-210ENST00000503827 CREB3L1Q96BA8 519 aa12.44□□□□□ -0.42
PDLIM7-210ENST00000503827 RCN3Q96D15 328 aa12.44□□□□□ -0.42
PDLIM7-210ENST00000503827 IL20Q9NYY1 176 aa12.44□□□□□ -0.42
PDLIM7-210ENST00000503827 NRASP01111 189 aa12.43□□□□□ -0.42
PDLIM7-210ENST00000503827 GSTT1P30711 240 aa12.43□□□□□ -0.42
PDLIM7-210ENST00000503827 INSL3P51460 131 aa12.43□□□□□ -0.42
PDLIM7-210ENST00000503827 FAM27D1Q5T7N8 215 aa12.43□□□□□ -0.42
PDLIM7-210ENST00000503827 CCDC144NLQ6NUI1 221 aa12.43□□□□□ -0.42
PDLIM7-210ENST00000503827 COMMD2Q86X83 199 aa12.43□□□□□ -0.42
PDLIM7-210ENST00000503827 FOXRED2Q8IWF2 684 aa12.43□□□□□ -0.42
PDLIM7-210ENST00000503827 THEM6Q8WUY1 208 aa12.43□□□□□ -0.42
PDLIM7-210ENST00000503827 SNX22Q96L94 193 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms