RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 OCMP0CE72 109 aaPredicted RBP20.91■□□□□ 0.94
LSM6-202ENST00000502781 CPEP16870 476 aa20.91■□□□□ 0.94
LSM6-202ENST00000502781 PITPNBP48739 271 aa20.91■□□□□ 0.94
LSM6-202ENST00000502781 PDZK1IP1Q13113 114 aa20.91■□□□□ 0.94
LSM6-202ENST00000502781 KCTD21Q4G0X4 260 aa20.91■□□□□ 0.94
LSM6-202ENST00000502781 LIPKQ5VXJ0 399 aa20.91■□□□□ 0.94
LSM6-202ENST00000502781 WDR25Q64LD2 544 aaPredicted RBP20.91■□□□□ 0.94
LSM6-202ENST00000502781 UNQ9370/PRO34162Q6UXP9 181 aa20.91■□□□□ 0.94
LSM6-202ENST00000502781 SSBP3Q9BWW4 388 aaPredicted RBP20.91■□□□□ 0.94
LSM6-202ENST00000502781 ZNF222Q9UK12 451 aa20.91■□□□□ 0.94
LSM6-202ENST00000502781 OR2AT4A6NND4 320 aa20.9■□□□□ 0.94
LSM6-202ENST00000502781 PIN1P1O15428 100 aa20.9■□□□□ 0.94
LSM6-202ENST00000502781 FCN3O75636 299 aa20.9■□□□□ 0.94
LSM6-202ENST00000502781 ALDOBP05062 364 aa20.9■□□□□ 0.94
LSM6-202ENST00000502781 HSMCR30P0CW71 290 aa20.9■□□□□ 0.94
LSM6-202ENST00000502781 PCMT1P22061 227 aa20.9■□□□□ 0.94
LSM6-202ENST00000502781 LCN2P80188 198 aa20.9■□□□□ 0.94
LSM6-202ENST00000502781 KISS1Q15726 138 aa20.9■□□□□ 0.94
LSM6-202ENST00000502781 SMIM21Q3B7S5 101 aa20.9■□□□□ 0.94
LSM6-202ENST00000502781 ZNF788Q6ZQV5 615 aa20.9■□□□□ 0.94
LSM6-202ENST00000502781 MKXQ8IYA7 352 aa20.9■□□□□ 0.94
LSM6-202ENST00000502781 SVOPQ8N4V2 548 aa20.9■□□□□ 0.94
LSM6-202ENST00000502781 OR5T2Q8NGG2 359 aa20.9■□□□□ 0.94
LSM6-202ENST00000502781 DACT3Q96B18 629 aaPredicted RBP20.9■□□□□ 0.94
LSM6-202ENST00000502781 CEP19Q96LK0 163 aa20.9■□□□□ 0.94
LSM6-202ENST00000502781 CCL13Q99616 98 aa20.9■□□□□ 0.94
LSM6-202ENST00000502781 SNTG1Q9NSN8 517 aa20.9■□□□□ 0.94
LSM6-202ENST00000502781 IGKV1D-17A0A075B6S4 117 aa20.89■□□□□ 0.93
LSM6-202ENST00000502781 INAFM1C9JVW0 142 aa20.89■□□□□ 0.93
LSM6-202ENST00000502781 F8VVB4 439 aa20.89■□□□□ 0.93
LSM6-202ENST00000502781 F8VWA3 439 aa20.89■□□□□ 0.93
LSM6-202ENST00000502781 PHF1O43189 567 aaPredicted RBP20.89■□□□□ 0.93
LSM6-202ENST00000502781 PLATP00750 562 aa20.89■□□□□ 0.93
LSM6-202ENST00000502781 HCKP08631 526 aa20.89■□□□□ 0.93
LSM6-202ENST00000502781 PSG2P11465 335 aa20.89■□□□□ 0.93
LSM6-202ENST00000502781 POU3F4P49335 361 aa20.89■□□□□ 0.93
LSM6-202ENST00000502781 NPY4RP50391 375 aa20.89■□□□□ 0.93
LSM6-202ENST00000502781 ZP1P60852 638 aa20.89■□□□□ 0.93
LSM6-202ENST00000502781 PAX2Q02962 417 aa20.89■□□□□ 0.93
LSM6-202ENST00000502781 ZNF773Q6PK81 442 aa20.89■□□□□ 0.93
LSM6-202ENST00000502781 PHC2Q8IXK0 858 aa20.89■□□□□ 0.93
LSM6-202ENST00000502781 SMURF1Q9HCE7 757 aa20.89■□□□□ 0.93
LSM6-202ENST00000502781 TMEM138Q9NPI0 162 aa20.89■□□□□ 0.93
LSM6-202ENST00000502781 CLN8Q9UBY8 286 aa20.89■□□□□ 0.93
LSM6-202ENST00000502781 ARHGAP32A7KAX9 2087 aa20.89■□□□□ 0.93
LSM6-202ENST00000502781 TRAV8-7A0A075B6U6 113 aa20.88■□□□□ 0.93
LSM6-202ENST00000502781 A0A1B0GW55 424 aa20.88■□□□□ 0.93
LSM6-202ENST00000502781 TRAPPC2LH3BP13 241 aa20.88■□□□□ 0.93
LSM6-202ENST00000502781 TMPRSS2O15393 492 aa20.88■□□□□ 0.93
LSM6-202ENST00000502781 NXPH2O95156 264 aa20.88■□□□□ 0.93
LSM6-202ENST00000502781 DUX4L2P0CJ85 424 aa20.88■□□□□ 0.93
LSM6-202ENST00000502781 DUX4L3P0CJ86 424 aa20.88■□□□□ 0.93
LSM6-202ENST00000502781 DUX4L4P0CJ87 422 aa20.88■□□□□ 0.93
LSM6-202ENST00000502781 DUX4L5P0CJ88 424 aa20.88■□□□□ 0.93
LSM6-202ENST00000502781 DUX4L6P0CJ89 424 aa20.88■□□□□ 0.93
LSM6-202ENST00000502781 DUX4L7P0CJ90 424 aa20.88■□□□□ 0.93
LSM6-202ENST00000502781 MAPK3P27361 379 aaPredicted RBP20.88■□□□□ 0.93
LSM6-202ENST00000502781 TGFBR2P37173 567 aa20.88■□□□□ 0.93
LSM6-202ENST00000502781 GNB2P62879 340 aa20.88■□□□□ 0.93
LSM6-202ENST00000502781 PPP3R1P63098 170 aa20.88■□□□□ 0.93
LSM6-202ENST00000502781 INSL4Q14641 139 aa20.88■□□□□ 0.93
LSM6-202ENST00000502781 ACSM3Q53FZ2 586 aa20.88■□□□□ 0.93
LSM6-202ENST00000502781 UBE2UQ5VVX9 321 aa20.88■□□□□ 0.93
LSM6-202ENST00000502781 DUX4L9Q6RFH8 374 aaPredicted RBP20.88■□□□□ 0.93
LSM6-202ENST00000502781 SLC36A1Q7Z2H8 476 aa20.88■□□□□ 0.93
LSM6-202ENST00000502781 OR52N4Q8NGI2 321 aa20.88■□□□□ 0.93
LSM6-202ENST00000502781 SLAMF9Q96A28 289 aa20.88■□□□□ 0.93
LSM6-202ENST00000502781 RFT1Q96AA3 541 aa20.88■□□□□ 0.93
LSM6-202ENST00000502781 TMED9Q9BVK6 235 aa20.88■□□□□ 0.93
LSM6-202ENST00000502781 DUX4Q9UBX2 424 aa20.88■□□□□ 0.93
LSM6-202ENST00000502781 FOXJ3Q9UPW0 622 aa20.88■□□□□ 0.93
LSM6-202ENST00000502781 SF3B6Q9Y3B4 125 aaKnown RBP20.88■□□□□ 0.93
LSM6-202ENST00000502781 WNK2Q9Y3S1 2297 aa20.88■□□□□ 0.93
LSM6-202ENST00000502781 IGKV1-12A0A0C4DH73 117 aa20.87■□□□□ 0.93
LSM6-202ENST00000502781 A0A1W2PPK0 400 aa20.87■□□□□ 0.93
LSM6-202ENST00000502781 SPRY1O43609 319 aaPredicted RBP20.87■□□□□ 0.93
LSM6-202ENST00000502781 IGKV1D-12P01611 117 aa20.87■□□□□ 0.93
LSM6-202ENST00000502781 Q8IYB0 196 aa20.87■□□□□ 0.93
LSM6-202ENST00000502781 SAXO1Q8IYX7 474 aa20.87■□□□□ 0.93
LSM6-202ENST00000502781 FAM216BQ8N7L0 139 aa20.87■□□□□ 0.93
LSM6-202ENST00000502781 ZSCAN4Q8NAM6 433 aaPredicted RBP20.87■□□□□ 0.93
LSM6-202ENST00000502781 GAFA1Q96PS6 74 aa20.87■□□□□ 0.93
LSM6-202ENST00000502781 NOX4Q9NPH5 578 aa20.87■□□□□ 0.93
LSM6-202ENST00000502781 CKLFQ9UBR5 152 aa20.87■□□□□ 0.93
LSM6-202ENST00000502781 SIGLEC5O15389 551 aa20.86■□□□□ 0.93
LSM6-202ENST00000502781 KDM4BO94953 1096 aa20.86■□□□□ 0.93
LSM6-202ENST00000502781 GATA3P23771 443 aa20.86■□□□□ 0.93
LSM6-202ENST00000502781 BDKRB2P30411 391 aa20.86■□□□□ 0.93
LSM6-202ENST00000502781 NPBWR2P48146 333 aa20.86■□□□□ 0.93
LSM6-202ENST00000502781 GP2P55259 537 aaKnown RBP20.86■□□□□ 0.93
LSM6-202ENST00000502781 CR1LQ2VPA4 569 aa20.86■□□□□ 0.93
LSM6-202ENST00000502781 C11orf91Q3C1V1 193 aa20.86■□□□□ 0.93
LSM6-202ENST00000502781 OR5D18Q8NGL1 313 aa20.86■□□□□ 0.93
LSM6-202ENST00000502781 CPNE2Q96FN4 548 aaPredicted RBP20.86■□□□□ 0.93
LSM6-202ENST00000502781 SDSLQ96GA7 329 aa20.86■□□□□ 0.93
LSM6-202ENST00000502781 MMP26Q9NRE1 261 aa20.86■□□□□ 0.93
LSM6-202ENST00000502781 SETD2Q9BYW2 2564 aaPredicted RBP20.86■□□□□ 0.93
LSM6-202ENST00000502781 MAGEA13PA6NCF6 341 aa20.85■□□□□ 0.93
LSM6-202ENST00000502781 RFPL4AA6NLU0 287 aa20.85■□□□□ 0.93
LSM6-202ENST00000502781 RFPL4AL1F8VTS6 287 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms