RNA–Protein interactions for RNA: ENST00000502751.5

LMNA-219, Transcript of lamin A/C, human

TSL 4

Gene LMNA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-219	ENST00000502751	ZNF879	B4DU55	563 aa		13.61	□□□□□ -0.23
LMNA-219	ENST00000502751	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	13.61	□□□□□ -0.23
LMNA-219	ENST00000502751	CLDN34	H7C241	214 aa		13.61	□□□□□ -0.23
LMNA-219	ENST00000502751	DVL1	O14640	695 aa		13.61	□□□□□ -0.23
LMNA-219	ENST00000502751	AKR7A2	O43488	359 aa		13.61	□□□□□ -0.23
LMNA-219	ENST00000502751	ATP1B3	P54709	279 aa		13.61	□□□□□ -0.23
LMNA-219	ENST00000502751	UBE2V2	Q15819	145 aa		13.61	□□□□□ -0.23
LMNA-219	ENST00000502751	C11orf91	Q3C1V1	193 aa		13.61	□□□□□ -0.23
LMNA-219	ENST00000502751	OR2G6	Q5TZ20	316 aa		13.61	□□□□□ -0.23
LMNA-219	ENST00000502751	LAIR2	Q6ISS4	152 aa		13.61	□□□□□ -0.23
LMNA-219	ENST00000502751	BRD3OS	Q6XYD6	125 aa		13.61	□□□□□ -0.23
LMNA-219	ENST00000502751	DNAAF1	Q8NEP3	725 aa		13.61	□□□□□ -0.23
LMNA-219	ENST00000502751	TSEN15	Q8WW01	171 aa	Known RBP	13.61	□□□□□ -0.23
LMNA-219	ENST00000502751	SPSB1	Q96BD6	273 aa		13.61	□□□□□ -0.23
LMNA-219	ENST00000502751	TMIGD2	Q96BF3	282 aa		13.61	□□□□□ -0.23
LMNA-219	ENST00000502751	SEH1L	Q96EE3	360 aa		13.61	□□□□□ -0.23
LMNA-219	ENST00000502751	PCGF1	Q9BSM1	259 aa		13.61	□□□□□ -0.23
LMNA-219	ENST00000502751	PKIB	Q9C010	78 aa		13.61	□□□□□ -0.23
LMNA-219	ENST00000502751	RAB26	Q9ULW5	256 aa		13.61	□□□□□ -0.23
LMNA-219	ENST00000502751	MDFIC2	A0A1B0GVS7	189 aa		13.6	□□□□□ -0.23
LMNA-219	ENST00000502751		A0A1B0GW55	424 aa		13.6	□□□□□ -0.23
LMNA-219	ENST00000502751		E9PI62	339 aa		13.6	□□□□□ -0.23
LMNA-219	ENST00000502751	SLC1A7	O00341	560 aa		13.6	□□□□□ -0.23
LMNA-219	ENST00000502751	TMPRSS2	O15393	492 aa		13.6	□□□□□ -0.23
LMNA-219	ENST00000502751	CYB5A	P00167	134 aa		13.6	□□□□□ -0.23
LMNA-219	ENST00000502751	CD2	P06729	351 aa		13.6	□□□□□ -0.23
LMNA-219	ENST00000502751	SFTPB	P07988	381 aa		13.6	□□□□□ -0.23
LMNA-219	ENST00000502751	RNASE1	P07998	156 aa	Known RBP	13.6	□□□□□ -0.23
LMNA-219	ENST00000502751	DUX4L2	P0CJ85	424 aa		13.6	□□□□□ -0.23
LMNA-219	ENST00000502751	DUX4L3	P0CJ86	424 aa		13.6	□□□□□ -0.23
LMNA-219	ENST00000502751	DUX4L4	P0CJ87	422 aa		13.6	□□□□□ -0.23
LMNA-219	ENST00000502751	DUX4L5	P0CJ88	424 aa		13.6	□□□□□ -0.23
LMNA-219	ENST00000502751	DUX4L6	P0CJ89	424 aa		13.6	□□□□□ -0.23
LMNA-219	ENST00000502751	DUX4L7	P0CJ90	424 aa		13.6	□□□□□ -0.23
LMNA-219	ENST00000502751	MMP9	P14780	707 aa		13.6	□□□□□ -0.23
LMNA-219	ENST00000502751	ATF1	P18846	271 aa		13.6	□□□□□ -0.23
LMNA-219	ENST00000502751	RBP2	P50120	134 aa		13.6	□□□□□ -0.23
LMNA-219	ENST00000502751	CDK5R1	Q15078	307 aa		13.6	□□□□□ -0.23
LMNA-219	ENST00000502751	DMRTC1	Q5HYR2	192 aa		13.6	□□□□□ -0.23
LMNA-219	ENST00000502751	DUX4L9	Q6RFH8	374 aa	Predicted RBP	13.6	□□□□□ -0.23
LMNA-219	ENST00000502751	BTN2A1	Q7KYR7	527 aa		13.6	□□□□□ -0.23
LMNA-219	ENST00000502751	SERPINA12	Q8IW75	414 aa		13.6	□□□□□ -0.23
LMNA-219	ENST00000502751	POC1A	Q8NBT0	407 aa		13.6	□□□□□ -0.23
LMNA-219	ENST00000502751	OR5D14	Q8NGL3	314 aa		13.6	□□□□□ -0.23
LMNA-219	ENST00000502751	TRMT10A	Q8TBZ6	339 aa	Known RBP	13.6	□□□□□ -0.23
LMNA-219	ENST00000502751	GPR148	Q8TDV2	347 aa		13.6	□□□□□ -0.23
LMNA-219	ENST00000502751	GATAD2B	Q8WXI9	593 aa		13.6	□□□□□ -0.23
LMNA-219	ENST00000502751	ADAT3	Q96EY9	351 aa	Predicted RBP	13.6	□□□□□ -0.23
LMNA-219	ENST00000502751	CPNE2	Q96FN4	548 aa	Predicted RBP	13.6	□□□□□ -0.23
LMNA-219	ENST00000502751	MED30	Q96HR3	178 aa		13.6	□□□□□ -0.23
LMNA-219	ENST00000502751	TBX15	Q96SF7	602 aa		13.6	□□□□□ -0.23
LMNA-219	ENST00000502751	CCL13	Q99616	98 aa		13.6	□□□□□ -0.23
LMNA-219	ENST00000502751	PDCD1LG2	Q9BQ51	273 aa		13.6	□□□□□ -0.23
LMNA-219	ENST00000502751	PRDM13	Q9H4Q3	707 aa		13.6	□□□□□ -0.23
LMNA-219	ENST00000502751		Q9H521	79 aa		13.6	□□□□□ -0.23
LMNA-219	ENST00000502751	ZMAT3	Q9HA38	289 aa	Known RBP	13.6	□□□□□ -0.23
LMNA-219	ENST00000502751	FKBP14	Q9NWM8	211 aa		13.6	□□□□□ -0.23
LMNA-219	ENST00000502751	NLK	Q9UBE8	527 aa		13.6	□□□□□ -0.23
LMNA-219	ENST00000502751	DUX4	Q9UBX2	424 aa		13.6	□□□□□ -0.23
LMNA-219	ENST00000502751	CLEC2D	Q9UHP7	191 aa		13.6	□□□□□ -0.23
LMNA-219	ENST00000502751	PTGES3L	E9PB15	166 aa		13.59	□□□□□ -0.23
LMNA-219	ENST00000502751	GPR37	O15354	613 aa		13.59	□□□□□ -0.23
LMNA-219	ENST00000502751	OGG1	O15527	345 aa		13.59	□□□□□ -0.23
LMNA-219	ENST00000502751	NOS1AP	O75052	506 aa	Predicted RBP	13.59	□□□□□ -0.23
LMNA-219	ENST00000502751	RHBDL1	O75783	438 aa		13.59	□□□□□ -0.23
LMNA-219	ENST00000502751	TOX4	O94842	621 aa		13.59	□□□□□ -0.23
LMNA-219	ENST00000502751	ECD	O95905	644 aa	Predicted RBP	13.59	□□□□□ -0.23
LMNA-219	ENST00000502751	ACAA1	P09110	424 aa	Predicted RBP	13.59	□□□□□ -0.23
LMNA-219	ENST00000502751	AMY2B	P19961	511 aa		13.59	□□□□□ -0.23
LMNA-219	ENST00000502751	MPZ	P25189	248 aa		13.59	□□□□□ -0.23
LMNA-219	ENST00000502751	GTF2A1	P52655	376 aa	Predicted RBP	13.59	□□□□□ -0.23
LMNA-219	ENST00000502751	WNT4	P56705	351 aa		13.59	□□□□□ -0.23
LMNA-219	ENST00000502751	BPIFB3	P59826	476 aa		13.59	□□□□□ -0.23
LMNA-219	ENST00000502751	GMFB	P60983	142 aa		13.59	□□□□□ -0.23
LMNA-219	ENST00000502751	FOXL1	Q12952	345 aa		13.59	□□□□□ -0.23
LMNA-219	ENST00000502751	IL24	Q13007	206 aa		13.59	□□□□□ -0.23
LMNA-219	ENST00000502751	DEFB112	Q30KQ8	113 aa		13.59	□□□□□ -0.23
LMNA-219	ENST00000502751	SMIM21	Q3B7S5	101 aa		13.59	□□□□□ -0.23
LMNA-219	ENST00000502751	ATPAF1	Q5TC12	328 aa	Predicted RBP	13.59	□□□□□ -0.23
LMNA-219	ENST00000502751	GPR157	Q5UAW9	335 aa		13.59	□□□□□ -0.23
LMNA-219	ENST00000502751	RNLS	Q5VYX0	342 aa		13.59	□□□□□ -0.23
LMNA-219	ENST00000502751	LHFPL2	Q6ZUX7	228 aa		13.59	□□□□□ -0.23
LMNA-219	ENST00000502751	FGFRL1	Q8N441	504 aa		13.59	□□□□□ -0.23
LMNA-219	ENST00000502751	PNLDC1	Q8NA58	520 aa	Known RBP	13.59	□□□□□ -0.23
LMNA-219	ENST00000502751	NPRL2	Q8WTW4	380 aa		13.59	□□□□□ -0.23
LMNA-219	ENST00000502751	SLC25A28	Q96A46	364 aa		13.59	□□□□□ -0.23
LMNA-219	ENST00000502751	SMIM19	Q96E16	107 aa		13.59	□□□□□ -0.23
LMNA-219	ENST00000502751	WDFY2	Q96P53	400 aa		13.59	□□□□□ -0.23
LMNA-219	ENST00000502751	ZCCHC4	Q9H5U6	513 aa		13.59	□□□□□ -0.23
LMNA-219	ENST00000502751	ZNF281	Q9Y2X9	895 aa		13.59	□□□□□ -0.23
LMNA-219	ENST00000502751	RRP15	Q9Y3B9	282 aa	Known RBP	13.59	□□□□□ -0.23
LMNA-219	ENST00000502751	PCDHGB5	Q9Y5G0	923 aa		13.59	□□□□□ -0.23
LMNA-219	ENST00000502751	CENPVL3	A0A0U1RRI6	287 aa		13.58	□□□□□ -0.24
LMNA-219	ENST00000502751	OR2AT4	A6NND4	320 aa		13.58	□□□□□ -0.24
LMNA-219	ENST00000502751	NDUFB3	O43676	98 aa		13.58	□□□□□ -0.24
LMNA-219	ENST00000502751	ALX3	O95076	343 aa		13.58	□□□□□ -0.24
LMNA-219	ENST00000502751	MT-ND2	P03891	347 aa		13.58	□□□□□ -0.24
LMNA-219	ENST00000502751	CDK1	P06493	297 aa		13.58	□□□□□ -0.24
LMNA-219	ENST00000502751	PGA5	P0DJD9	388 aa		13.58	□□□□□ -0.24
LMNA-219	ENST00000502751	AZGP1	P25311	298 aa	Known RBP	13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms