RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 HPCAL1P37235 193 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 MLF1P58340 268 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 SEC61GP60059 68 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 MRPL49Q13405 166 aaKnown RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 DHCR24Q15392 516 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 ZIC1Q15915 447 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 FSCN1Q16658 493 aaKnown RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 TCEAL5Q5H9L2 206 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 FOXB2Q5VYV0 432 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 IL20RBQ6UXL0 311 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 ZNF836Q6ZNA1 936 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 CENPQQ7L2Z9 268 aaPredicted RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 TMEM144Q7Z5S9 345 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 ZNF573Q86YE8 665 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 FAM219AQ8IW50 185 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 TEX29Q8N6K0 151 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 RNF148Q8N7C7 305 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 OR10AG1Q8NH19 301 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 OR1F12Q8NHA8 337 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 FAM222BQ8WU58 562 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 PPDPFLQ8WWR9 84 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 RIT1Q92963 219 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 FAM136AQ96C01 138 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 EFHD2Q96C19 240 aaPredicted RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 CMTM3Q96MX0 182 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 PFDN5Q99471 154 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 TUBA1CQ9BQE3 449 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 XPO4Q9C0E2 1151 aaKnown RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 B3GNT2Q9NY97 397 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 SLC25A37Q9NYZ2 338 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 KLHL42Q9P2K6 505 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 TSPYL4Q9UJ04 414 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 APLNQ9ULZ1 77 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 UFC1Q9Y3C8 167 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 ZNF337Q9Y3M9 751 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 OARD1Q9Y530 152 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 NME7Q9Y5B8 376 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 ZBED9Q6R2W3 1325 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 ANKRD50Q9ULJ7 1429 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 COL4A2P08572 1712 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 SIPA1L1O43166 1804 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 A0A087WSZ3 146 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 A0A087WXM4 84 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 TMEM72A0PK05 275 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 OR6C68A6NDL8 312 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 ZNF705FA8MVS1 300 aaPredicted RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 CXCR6O00574 342 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 PPP1R11O60927 126 aaPredicted RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 NOS1APO75052 506 aaPredicted RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 ERAL1O75616 437 aaKnown RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 SOD1P00441 154 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 C2P06681 752 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 SNRPA1P09661 255 aaKnown RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 FAM228BP0C875 321 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 CTSAP10619 480 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 FOLR2P14207 255 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 IGFBP6P24592 240 aaPredicted RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 PRDX3P30048 256 aaKnown RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 CCR1P32246 355 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 MAP2K4P45985 399 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 LGALS7P47929 136 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 ATP1B3P54709 279 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 PPP1CBP62140 327 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 VLDLRP98155 873 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 YWHAHQ04917 246 aaPredicted RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 DRAP1Q14919 205 aaPredicted RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 TRAM2Q15035 370 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 RSBN1Q5VWQ0 802 aaPredicted RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 PM20D1Q6GTS8 502 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 C8orf74Q6P047 294 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 LBX2Q6XYB7 198 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 BHLHA15Q7RTS1 189 aaPredicted RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 PID1Q7Z2X4 250 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 FAM90A1Q86YD7 464 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 TMEM123Q8N131 208 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 PELI3Q8N2H9 469 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 CLRN3Q8NCR9 226 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 OR51A2Q8NGJ7 313 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 OR2Y1Q8NGV0 311 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 OR51A7Q8NH64 312 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 HUS1BQ8NHY5 278 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 FAM110BQ8TC76 370 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 ASB12Q8WXK4 309 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 HOXB13Q92826 284 aaPredicted RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 TMEM230Q96A57 120 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 CEP295NLQ96MC4 621 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 SIGLEC11Q96RL6 698 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 FOXB1Q99853 325 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 CNPPD1Q9BV87 410 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 SSBP3Q9BWW4 388 aaPredicted RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 SLC25A2Q9BXI2 301 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 ZNF430Q9H8G1 570 aaPredicted RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 ZDHHC11Q9H8X9 412 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 SPACA1Q9HBV2 294 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 VNN3Q9NY84 501 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 TAS2R13Q9NYV9 303 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 TAS2R10Q9NYW0 307 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 LARSQ9P2J5 1176 aaKnown RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 PCSK1NQ9UHG2 260 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 ICOSQ9Y6W8 199 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms