RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 RPS21P63220 83 aaKnown RBP4.67□□□□□ -1.66
BRCA1-224ENST00000497488 IL5RAQ01344 420 aa4.67□□□□□ -1.66
BRCA1-224ENST00000497488 AESQ08117 197 aa4.67□□□□□ -1.66
BRCA1-224ENST00000497488 QPRTQ15274 297 aa4.67□□□□□ -1.66
BRCA1-224ENST00000497488 ZSCAN26Q16670 478 aa4.67□□□□□ -1.66
BRCA1-224ENST00000497488 FAM182AQ5T1J6 154 aa4.67□□□□□ -1.66
BRCA1-224ENST00000497488 SYT6Q5T7P8 510 aaPredicted RBP4.67□□□□□ -1.66
BRCA1-224ENST00000497488 LEMD1Q68G75 181 aa4.67□□□□□ -1.66
BRCA1-224ENST00000497488 SYCE2Q6PIF2 218 aa4.67□□□□□ -1.66
BRCA1-224ENST00000497488 C10orf107Q8IVU9 208 aa4.67□□□□□ -1.66
BRCA1-224ENST00000497488 PIGXQ8TBF5 258 aa4.67□□□□□ -1.66
BRCA1-224ENST00000497488 FAM222BQ8WU58 562 aa4.67□□□□□ -1.66
BRCA1-224ENST00000497488 FAM3DQ96BQ1 224 aa4.67□□□□□ -1.66
BRCA1-224ENST00000497488 SLC45A3Q96JT2 553 aa4.67□□□□□ -1.66
BRCA1-224ENST00000497488 FAM19A4Q96LR4 140 aa4.67□□□□□ -1.66
BRCA1-224ENST00000497488 ZNF599Q96NL3 588 aa4.67□□□□□ -1.66
BRCA1-224ENST00000497488 RBP7Q96R05 134 aa4.67□□□□□ -1.66
BRCA1-224ENST00000497488 CDCA4Q9BXL8 241 aa4.67□□□□□ -1.66
BRCA1-224ENST00000497488 SLC19A3Q9BZV2 496 aa4.67□□□□□ -1.66
BRCA1-224ENST00000497488 DEFB127Q9H1M4 99 aa4.67□□□□□ -1.66
BRCA1-224ENST00000497488 FGF22Q9HCT0 170 aa4.67□□□□□ -1.66
BRCA1-224ENST00000497488 FBXO6Q9NRD1 293 aaPredicted RBP4.67□□□□□ -1.66
BRCA1-224ENST00000497488 SIGLEC9Q9Y336 463 aa4.67□□□□□ -1.66
BRCA1-224ENST00000497488 LAMB1P07942 1786 aa4.67□□□□□ -1.66
BRCA1-224ENST00000497488 ZNF532Q9HCE3 1301 aa4.67□□□□□ -1.66
BRCA1-224ENST00000497488 H7C417 338 aa4.66□□□□□ -1.66
BRCA1-224ENST00000497488 PGRMC1O00264 195 aaKnown RBP4.66□□□□□ -1.66
BRCA1-224ENST00000497488 CCRL2O00421 344 aa4.66□□□□□ -1.66
BRCA1-224ENST00000497488 TBL1XO60907 577 aa4.66□□□□□ -1.66
BRCA1-224ENST00000497488 UPK1BO75841 260 aa4.66□□□□□ -1.66
BRCA1-224ENST00000497488 CSF3P09919 207 aa4.66□□□□□ -1.66
BRCA1-224ENST00000497488 SLC35G6P0C7Q6 338 aa4.66□□□□□ -1.66
BRCA1-224ENST00000497488 CCNE1P24864 410 aa4.66□□□□□ -1.66
BRCA1-224ENST00000497488 G0S2P27469 103 aa4.66□□□□□ -1.66
BRCA1-224ENST00000497488 GRPRP30550 384 aa4.66□□□□□ -1.66
BRCA1-224ENST00000497488 CBX5P45973 191 aa4.66□□□□□ -1.66
BRCA1-224ENST00000497488 RPS9P46781 194 aaKnown RBP4.66□□□□□ -1.66
BRCA1-224ENST00000497488 PRR3P79522 188 aaKnown RBP4.66□□□□□ -1.66
BRCA1-224ENST00000497488 OR1Q1Q15612 314 aa4.66□□□□□ -1.66
BRCA1-224ENST00000497488 PRR4Q16378 134 aa4.66□□□□□ -1.66
BRCA1-224ENST00000497488 ZNF876PQ49A33 203 aa4.66□□□□□ -1.66
BRCA1-224ENST00000497488 SPIN4Q56A73 249 aa4.66□□□□□ -1.66
BRCA1-224ENST00000497488 STPG1Q5TH74 334 aa4.66□□□□□ -1.66
BRCA1-224ENST00000497488 SPOPLQ6IQ16 392 aa4.66□□□□□ -1.66
BRCA1-224ENST00000497488 CD200R1LQ6Q8B3 271 aa4.66□□□□□ -1.66
BRCA1-224ENST00000497488 RTL4Q6ZR62 310 aa4.66□□□□□ -1.66
BRCA1-224ENST00000497488 FAM220AQ7Z4H9 259 aa4.66□□□□□ -1.66
BRCA1-224ENST00000497488 C1QL2Q7Z5L3 287 aa4.66□□□□□ -1.66
BRCA1-224ENST00000497488 OAFQ86UD1 273 aa4.66□□□□□ -1.66
BRCA1-224ENST00000497488 TRAPPC5Q8IUR0 188 aa4.66□□□□□ -1.66
BRCA1-224ENST00000497488 SLC34A3Q8N130 599 aa4.66□□□□□ -1.66
BRCA1-224ENST00000497488 CADM2Q8N3J6 435 aa4.66□□□□□ -1.66
BRCA1-224ENST00000497488 OR10AD1Q8NGE0 317 aa4.66□□□□□ -1.66
BRCA1-224ENST00000497488 NT5CQ8TCD5 201 aa4.66□□□□□ -1.66
BRCA1-224ENST00000497488 ITLN1Q8WWA0 313 aa4.66□□□□□ -1.66
BRCA1-224ENST00000497488 C22orf15Q8WYQ4 148 aa4.66□□□□□ -1.66
BRCA1-224ENST00000497488 DNAJC19Q96DA6 116 aa4.66□□□□□ -1.66
BRCA1-224ENST00000497488 FCRL1Q96LA6 429 aa4.66□□□□□ -1.66
BRCA1-224ENST00000497488 TRIM15Q9C019 465 aa4.66□□□□□ -1.66
BRCA1-224ENST00000497488 LHX5Q9H2C1 402 aa4.66□□□□□ -1.66
BRCA1-224ENST00000497488 TMEM27Q9HBJ8 222 aa4.66□□□□□ -1.66
BRCA1-224ENST00000497488 PLGRKTQ9HBL7 147 aa4.66□□□□□ -1.66
BRCA1-224ENST00000497488 ABCB9Q9NP78 766 aa4.66□□□□□ -1.66
BRCA1-224ENST00000497488 RGS18Q9NS28 235 aa4.66□□□□□ -1.66
BRCA1-224ENST00000497488 DHRS4-AS1Q9P1J3 65 aa4.66□□□□□ -1.66
BRCA1-224ENST00000497488 MTFP1Q9UDX5 166 aa4.66□□□□□ -1.66
BRCA1-224ENST00000497488 CACNG5Q9UF02 275 aa4.66□□□□□ -1.66
BRCA1-224ENST00000497488 VAX2Q9UIW0 290 aa4.66□□□□□ -1.66
BRCA1-224ENST00000497488 SLC25A15Q9Y619 301 aa4.66□□□□□ -1.66
BRCA1-224ENST00000497488 COL2A1P02458 1487 aaPredicted RBP4.66□□□□□ -1.66
BRCA1-224ENST00000497488 CDK5RAP2Q96SN8 1893 aa4.66□□□□□ -1.66
BRCA1-224ENST00000497488 HTTP42858 3142 aa4.66□□□□□ -1.66
BRCA1-224ENST00000497488 FOCADQ5VW36 1801 aa4.65□□□□□ -1.66
BRCA1-224ENST00000497488 TRAV8-4A0A0B4J246 113 aa4.65□□□□□ -1.67
BRCA1-224ENST00000497488 CCL15-CCL14A0A0B4J2E2 113 aa4.65□□□□□ -1.67
BRCA1-224ENST00000497488 FAM72CH0Y354 149 aa4.65□□□□□ -1.67
BRCA1-224ENST00000497488 BMPR1BO00238 502 aa4.65□□□□□ -1.67
BRCA1-224ENST00000497488 UBDO15205 165 aa4.65□□□□□ -1.67
BRCA1-224ENST00000497488 LMX1BO60663 402 aa4.65□□□□□ -1.67
BRCA1-224ENST00000497488 ZNF780AO75290 641 aaPredicted RBP4.65□□□□□ -1.67
BRCA1-224ENST00000497488 UGT2B11O75310 529 aa4.65□□□□□ -1.67
BRCA1-224ENST00000497488 RDH16O75452 317 aa4.65□□□□□ -1.67
BRCA1-224ENST00000497488 DUSP14O95147 198 aaKnown RBP4.65□□□□□ -1.67
BRCA1-224ENST00000497488 SNAPINO95295 136 aa4.65□□□□□ -1.67
BRCA1-224ENST00000497488 P01737 135 aa4.65□□□□□ -1.67
BRCA1-224ENST00000497488 IGHV3-48P01763 117 aa4.65□□□□□ -1.67
BRCA1-224ENST00000497488 ALPLP05186 524 aa4.65□□□□□ -1.67
BRCA1-224ENST00000497488 CCDC166P0CW27 439 aa4.65□□□□□ -1.67
BRCA1-224ENST00000497488 RCC1P18754 421 aaPredicted RBP4.65□□□□□ -1.67
BRCA1-224ENST00000497488 MYL9P24844 172 aa4.65□□□□□ -1.67
BRCA1-224ENST00000497488 PSMD7P51665 324 aa4.65□□□□□ -1.67
BRCA1-224ENST00000497488 CD47Q08722 323 aa4.65□□□□□ -1.67
BRCA1-224ENST00000497488 PRPSAP1Q14558 356 aa4.65□□□□□ -1.67
BRCA1-224ENST00000497488 KIAA0087Q14695 138 aa4.65□□□□□ -1.67
BRCA1-224ENST00000497488 TGIF1Q15583 401 aa4.65□□□□□ -1.67
BRCA1-224ENST00000497488 CCL15Q16663 113 aa4.65□□□□□ -1.67
BRCA1-224ENST00000497488 KRTAP15-1Q3LI76 137 aa4.65□□□□□ -1.67
BRCA1-224ENST00000497488 TMEM176BQ3YBM2 270 aaPredicted RBP4.65□□□□□ -1.67
BRCA1-224ENST00000497488 CHRFAM7AQ494W8 412 aa4.65□□□□□ -1.67
BRCA1-224ENST00000497488 ZNF658BQ4V348 819 aaPredicted RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms