RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 ANKRD20A5PA0PJZ0 165 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 PLA2G5P39877 138 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 KCNJ3P48549 501 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 NAAAQ02083 359 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 TMED4Q7Z7H5 227 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 OR5T2Q8NGG2 359 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 ERGIC1Q969X5 290 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 WBP1Q96G27 269 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 ZC4H2Q9NQZ6 224 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 MEIOCA2RUB1 952 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 TMEM235A6NFC5 223 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 POM121CA8CG34 1229 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 TMEM14DPA8MWL7 114 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 SPRY1O43609 319 aaPredicted RBP7.23□□□□□ -1.25
USP54-215ENST00000497106 DTYMKP23919 212 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 GLRXP35754 106 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 SNRPD2P62316 118 aaKnown RBP7.23□□□□□ -1.25
USP54-215ENST00000497106 BEX5Q5H9J7 111 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 BEST4Q8NFU0 473 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 OR10K1Q8NGX5 313 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 YIPF5Q969M3 257 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 OCSTAMPQ9BR26 566 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 OR2J1Q9GZK6 312 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 ARPC1BO15143 372 aaKnown RBP7.23□□□□□ -1.25
USP54-215ENST00000497106 BTF3P20290 206 aaKnown RBP7.23□□□□□ -1.25
USP54-215ENST00000497106 HLA-DMAP28067 261 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 ALDH3B1P43353 468 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 ZNF79Q15937 498 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 PRSS45Q7RTY3 260 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 DOLPP1Q86YN1 238 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 CMTM1Q8IZ96 169 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 ASB13Q8WXK3 278 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 SLAMF9Q96A28 289 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 PPIL3Q9H2H8 161 aaKnown RBP7.23□□□□□ -1.25
USP54-215ENST00000497106 HSF4Q9ULV5 492 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 SHISA3A0PJX4 238 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 TMEM82A0PJX8 343 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 IQCF6A8MYZ5 107 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 RNASE6Q93091 150 aaKnown RBP7.23□□□□□ -1.25
USP54-215ENST00000497106 PHB2Q99623 299 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 C20orf85Q9H1P6 137 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 OR51J1Q9H342 316 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 B3GNT2Q9NY97 397 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 TAAR3PQ9P1P4 343 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 ZDHHC8Q9ULC8 765 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 RNF212BA8MTL3 300 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 PMELP40967 661 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 CA7P43166 264 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 UBE2MP61081 183 aaKnown RBP7.23□□□□□ -1.25
USP54-215ENST00000497106 SRPXP78539 464 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 FGL1Q08830 312 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 TAF9Q16594 264 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 IGSF11Q5DX21 431 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 SPIN3Q5JUX0 258 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 OR10K2Q6IF99 312 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 GDPD3Q7L5L3 318 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 SGPP2Q8IWX5 399 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 DUSP18Q8NEJ0 188 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 GPX8Q8TED1 209 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 SLC25A38Q96DW6 304 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 ABHD1Q96SE0 405 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 PECRQ9BY49 303 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 MMP28Q9H239 520 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 RANBP3Q9H6Z4 567 aaPredicted RBP7.23□□□□□ -1.25
USP54-215ENST00000497106 RASL12Q9NYN1 266 aa7.23□□□□□ -1.25
USP54-215ENST00000497106 LOC100509620A0A075B734 347 aa7.22□□□□□ -1.25
USP54-215ENST00000497106 PET100P0DJ07 73 aa7.22□□□□□ -1.25
USP54-215ENST00000497106 GNB3P16520 340 aa7.22□□□□□ -1.25
USP54-215ENST00000497106 VAMP1P23763 118 aa7.22□□□□□ -1.25
USP54-215ENST00000497106 P2RX3P56373 397 aa7.22□□□□□ -1.25
USP54-215ENST00000497106 CYCSP99999 105 aaKnown RBP7.22□□□□□ -1.25
USP54-215ENST00000497106 CDK10Q15131 360 aa7.22□□□□□ -1.25
USP54-215ENST00000497106 ZNF600Q6ZNG1 722 aa7.22□□□□□ -1.25
USP54-215ENST00000497106 BOLLQ8N9W6 283 aaKnown RBP7.22□□□□□ -1.25
USP54-215ENST00000497106 ELMOD3Q96FG2 381 aa7.22□□□□□ -1.25
USP54-215ENST00000497106 SLC6A7Q99884 636 aa7.22□□□□□ -1.25
USP54-215ENST00000497106 IFT22Q9H7X7 185 aa7.22□□□□□ -1.25
USP54-215ENST00000497106 CNTRLQ7Z7A1 2325 aa7.22□□□□□ -1.25
USP54-215ENST00000497106 IGHV2OR16-5A0A0B4J2B6 119 aa7.22□□□□□ -1.25
USP54-215ENST00000497106 A8MXE2 369 aa7.22□□□□□ -1.25
USP54-215ENST00000497106 RGS11O94810 467 aa7.22□□□□□ -1.25
USP54-215ENST00000497106 CECR9P0C854 216 aa7.22□□□□□ -1.25
USP54-215ENST00000497106 FGF12P61328 243 aa7.22□□□□□ -1.25
USP54-215ENST00000497106 IL24Q13007 206 aa7.22□□□□□ -1.25
USP54-215ENST00000497106 COLCA1Q6ZS62 124 aa7.22□□□□□ -1.25
USP54-215ENST00000497106 ZDHHC22Q8N966 263 aa7.22□□□□□ -1.25
USP54-215ENST00000497106 OR5P3Q8WZ94 311 aa7.22□□□□□ -1.25
USP54-215ENST00000497106 TM2D1Q9BX74 207 aa7.22□□□□□ -1.25
USP54-215ENST00000497106 MS4A5Q9H3V2 200 aa7.22□□□□□ -1.25
USP54-215ENST00000497106 A0A1W2PPH5 198 aa7.22□□□□□ -1.25
USP54-215ENST00000497106 MEIS3P1A6NDR6 274 aa7.22□□□□□ -1.25
USP54-215ENST00000497106 TUBAL3A6NHL2 446 aa7.22□□□□□ -1.25
USP54-215ENST00000497106 CD34P28906 385 aa7.22□□□□□ -1.25
USP54-215ENST00000497106 TNFAIP6P98066 277 aaPredicted RBP7.22□□□□□ -1.25
USP54-215ENST00000497106 HLXQ14774 488 aaPredicted RBP7.22□□□□□ -1.25
USP54-215ENST00000497106 TATDN3Q17R31 274 aa7.22□□□□□ -1.25
USP54-215ENST00000497106 OR2Z1Q8NG97 314 aa7.22□□□□□ -1.25
USP54-215ENST00000497106 OR10Z1Q8NGY1 313 aa7.22□□□□□ -1.25
USP54-215ENST00000497106 KLF14Q8TD94 323 aaPredicted RBP7.22□□□□□ -1.25
USP54-215ENST00000497106 TIMD4Q96H15 378 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms