RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, human

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-A-208	ENST00000496081	BOLA2-SMG1P6	H3BVE0	249 aa		13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	GEMIN2	O14893	280 aa	Known RBP	13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	AKR7A2	O43488	359 aa		13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	RAB3D	O95716	219 aa		13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	H2AFB2	P0C5Z0	115 aa		13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	ARL6IP1	Q15041	203 aa		13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	IGFBP7	Q16270	282 aa		13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	C1QTNF12	Q5T7M4	302 aa		13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	ZNF782	Q6ZMW2	699 aa	Predicted RBP	13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	C6orf201	Q7Z4U5	140 aa		13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	AKAP14	Q86UN6	197 aa		13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	BATF2	Q8N1L9	274 aa		13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	ST6GALNAC3	Q8NDV1	305 aa		13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	TINAGL1	Q9GZM7	467 aa	Predicted RBP	13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	C20orf85	Q9H1P6	137 aa		13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	NKIRAS2	Q9NYR9	191 aa		13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	MTCH1	Q9NZJ7	389 aa		13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	FLVCR2	Q9UPI3	526 aa		13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	MEMO1	Q9Y316	297 aa		13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	SHANK1	Q9Y566	2161 aa		13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	PCNX1	Q96RV3	2341 aa		13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	CACNA1B	Q00975	2339 aa		13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	SERPINE3	A8MV23	424 aa		13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	C16orf97	H3BN30	126 aa		13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081		M0QYG6	137 aa		13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	SYNGR1	O43759	233 aa		13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	NDUFB6	O95139	128 aa		13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	DHFR	P00374	187 aa		13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	BCL3	P20749	454 aa		13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	FABP6	P51161	128 aa		13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	RAG2	P55895	527 aa		13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	ARFRP1	Q13795	201 aa		13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	LY6D	Q14210	128 aa		13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	TMEM211	Q6ICI0	200 aa		13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	OR52W1	Q6IF63	320 aa		13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	HAGHL	Q6PII5	290 aa	Predicted RBP	13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	SEZ6L2	Q6UXD5	910 aa		13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	ZNF573	Q86YE8	665 aa		13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	MKX	Q8IYA7	352 aa		13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	C1orf174	Q8IYL3	243 aa		13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	OR51S1	Q8NGJ8	323 aa		13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	OR51I2	Q9H344	312 aa		13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	IFT46	Q9NQC8	304 aa		13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	PLEKHJ1	Q9NW61	149 aa		13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	PURG	Q9UJV8	347 aa	Known RBP	13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	ANAPC10	Q9UM13	185 aa		13.99	□□□□□ -0.17
HLA-A-208	ENST00000496081	HMX3	A6NHT5	357 aa		13.98	□□□□□ -0.17
HLA-A-208	ENST00000496081		F8VVB4	439 aa		13.98	□□□□□ -0.17
HLA-A-208	ENST00000496081		F8VWA3	439 aa		13.98	□□□□□ -0.17
HLA-A-208	ENST00000496081	SFTPC	P11686	197 aa		13.98	□□□□□ -0.17
HLA-A-208	ENST00000496081	KITLG	P21583	273 aa		13.98	□□□□□ -0.17
HLA-A-208	ENST00000496081	RBM11	P57052	281 aa	Known RBP	13.98	□□□□□ -0.17
HLA-A-208	ENST00000496081	ZNF718	Q3SXZ3	478 aa		13.98	□□□□□ -0.17
HLA-A-208	ENST00000496081	NKAPL	Q5M9Q1	402 aa		13.98	□□□□□ -0.17
HLA-A-208	ENST00000496081	ELP2	Q6IA86	826 aa		13.98	□□□□□ -0.17
HLA-A-208	ENST00000496081	WDR86	Q86TI4	376 aa		13.98	□□□□□ -0.17
HLA-A-208	ENST00000496081	OR8G5	Q8NG78	346 aa		13.98	□□□□□ -0.17
HLA-A-208	ENST00000496081	FBXW5	Q969U6	566 aa		13.98	□□□□□ -0.17
HLA-A-208	ENST00000496081	RADIL	Q96JH8	1075 aa		13.98	□□□□□ -0.17
HLA-A-208	ENST00000496081	MICU1	Q9BPX6	476 aa		13.98	□□□□□ -0.17
HLA-A-208	ENST00000496081	OCSTAMP	Q9BR26	566 aa		13.98	□□□□□ -0.17
HLA-A-208	ENST00000496081	ADAT1	Q9BUB4	502 aa	Known RBP	13.98	□□□□□ -0.17
HLA-A-208	ENST00000496081	RTL8A	Q9BWD3	113 aa		13.98	□□□□□ -0.17
HLA-A-208	ENST00000496081	OR10A4	Q9H209	315 aa		13.98	□□□□□ -0.17
HLA-A-208	ENST00000496081	POU2F3	Q9UKI9	436 aa		13.98	□□□□□ -0.17
HLA-A-208	ENST00000496081	HSF4	Q9ULV5	492 aa		13.98	□□□□□ -0.17
HLA-A-208	ENST00000496081	FZR1	Q9UM11	496 aa		13.98	□□□□□ -0.17
HLA-A-208	ENST00000496081	NOP16	Q9Y3C1	178 aa	Known RBP	13.98	□□□□□ -0.17
HLA-A-208	ENST00000496081	POLE	Q07864	2286 aa		13.98	□□□□□ -0.17
HLA-A-208	ENST00000496081	ITPR1	Q14643	2758 aa		13.98	□□□□□ -0.17
HLA-A-208	ENST00000496081		A0A0A6YYJ9	748 aa		13.97	□□□□□ -0.17
HLA-A-208	ENST00000496081	CA11	O75493	328 aa		13.97	□□□□□ -0.17
HLA-A-208	ENST00000496081	CRYAA	P02489	173 aa		13.97	□□□□□ -0.17
HLA-A-208	ENST00000496081	NAT1	P18440	290 aa		13.97	□□□□□ -0.17
HLA-A-208	ENST00000496081	CHAT	P28329	748 aa		13.97	□□□□□ -0.17
HLA-A-208	ENST00000496081	CA7	P43166	264 aa		13.97	□□□□□ -0.17
HLA-A-208	ENST00000496081	CASP6	P55212	293 aa		13.97	□□□□□ -0.17
HLA-A-208	ENST00000496081	DAZAP2	Q15038	168 aa	Predicted RBP	13.97	□□□□□ -0.17
HLA-A-208	ENST00000496081	FAM76B	Q5HYJ3	339 aa		13.97	□□□□□ -0.17
HLA-A-208	ENST00000496081	MBNL2	Q5VZF2	373 aa	Known RBP	13.97	□□□□□ -0.17
HLA-A-208	ENST00000496081	OR10AD1	Q8NGE0	317 aa		13.97	□□□□□ -0.17
HLA-A-208	ENST00000496081	SNAPC3	Q92966	411 aa		13.97	□□□□□ -0.17
HLA-A-208	ENST00000496081	HS3ST6	Q96QI5	342 aa		13.97	□□□□□ -0.17
HLA-A-208	ENST00000496081	USB1	Q9BQ65	265 aa	Known RBP	13.97	□□□□□ -0.17
HLA-A-208	ENST00000496081	C7orf66	A4D0T2	115 aa		13.96	□□□□□ -0.17
HLA-A-208	ENST00000496081		H0YL77	283 aa		13.96	□□□□□ -0.17
HLA-A-208	ENST00000496081	TRAPPC2L	H3BP13	241 aa		13.96	□□□□□ -0.17
HLA-A-208	ENST00000496081	ZNF735	P0CB33	412 aa		13.96	□□□□□ -0.17
HLA-A-208	ENST00000496081	MPZ	P25189	248 aa		13.96	□□□□□ -0.17
HLA-A-208	ENST00000496081	GCH1	P30793	250 aa		13.96	□□□□□ -0.17
HLA-A-208	ENST00000496081	FGF12	P61328	243 aa		13.96	□□□□□ -0.17
HLA-A-208	ENST00000496081	IL24	Q13007	206 aa		13.96	□□□□□ -0.17
HLA-A-208	ENST00000496081	PCSK4	Q6UW60	755 aa		13.96	□□□□□ -0.17
HLA-A-208	ENST00000496081	POM121	Q96HA1	1249 aa		13.96	□□□□□ -0.17
HLA-A-208	ENST00000496081	FAAP24	Q9BTP7	215 aa		13.96	□□□□□ -0.17
HLA-A-208	ENST00000496081	PKIB	Q9C010	78 aa		13.96	□□□□□ -0.17
HLA-A-208	ENST00000496081	GHITM	Q9H3K2	345 aa		13.96	□□□□□ -0.17
HLA-A-208	ENST00000496081	NPDC1	Q9NQX5	325 aa	Predicted RBP	13.96	□□□□□ -0.17
HLA-A-208	ENST00000496081	TMEM100	Q9NV29	134 aa		13.96	□□□□□ -0.17
HLA-A-208	ENST00000496081	CAD	P27708	2225 aa		13.96	□□□□□ -0.18

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