RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 ZNF488Q96MN9 340 aa10.09□□□□□ -0.79
CSNK1E-213ENST00000495232 SPACA5Q96QH8 159 aa10.09□□□□□ -0.79
CSNK1E-213ENST00000495232 CCL13Q99616 98 aa10.09□□□□□ -0.79
CSNK1E-213ENST00000495232 MGLLQ99685 303 aa10.09□□□□□ -0.79
CSNK1E-213ENST00000495232 DNTTIP1Q9H147 329 aa10.09□□□□□ -0.79
CSNK1E-213ENST00000495232 LRRC42Q9Y546 428 aa10.09□□□□□ -0.79
CSNK1E-213ENST00000495232 HIVEP2P31629 2446 aa10.08□□□□□ -0.8
CSNK1E-213ENST00000495232 TLN2Q9Y4G6 2542 aa10.08□□□□□ -0.8
CSNK1E-213ENST00000495232 A0A1W2PPK0 400 aa10.08□□□□□ -0.8
CSNK1E-213ENST00000495232 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.08□□□□□ -0.8
CSNK1E-213ENST00000495232 NDUFB3O43676 98 aa10.08□□□□□ -0.8
CSNK1E-213ENST00000495232 TMEM225BP0DP42 221 aa10.08□□□□□ -0.8
CSNK1E-213ENST00000495232 BDKRB2P30411 391 aa10.08□□□□□ -0.8
CSNK1E-213ENST00000495232 TGFBR2P37173 567 aa10.08□□□□□ -0.8
CSNK1E-213ENST00000495232 SEC61A1P61619 476 aaKnown RBP10.08□□□□□ -0.8
CSNK1E-213ENST00000495232 RPS11P62280 158 aaKnown RBP eCLIP10.08□□□□□ -0.8
CSNK1E-213ENST00000495232 EMX1Q04741 257 aaPredicted RBP10.08□□□□□ -0.8
CSNK1E-213ENST00000495232 PDZK1IP1Q13113 114 aa10.08□□□□□ -0.8
CSNK1E-213ENST00000495232 ACSM3Q53FZ2 586 aa10.08□□□□□ -0.8
CSNK1E-213ENST00000495232 LRRC10Q5BKY1 277 aa10.08□□□□□ -0.8
CSNK1E-213ENST00000495232 CD276Q5ZPR3 534 aa10.08□□□□□ -0.8
CSNK1E-213ENST00000495232 WDR25Q64LD2 544 aaPredicted RBP10.08□□□□□ -0.8
CSNK1E-213ENST00000495232 STUMQ69YW2 141 aa10.08□□□□□ -0.8
CSNK1E-213ENST00000495232 BTNL3Q6UXE8 466 aa10.08□□□□□ -0.8
CSNK1E-213ENST00000495232 ACP7Q6ZNF0 438 aa10.08□□□□□ -0.8
CSNK1E-213ENST00000495232 BATF2Q8N1L9 274 aa10.08□□□□□ -0.8
CSNK1E-213ENST00000495232 PNLDC1Q8NA58 520 aaKnown RBP10.08□□□□□ -0.8
CSNK1E-213ENST00000495232 OR5D18Q8NGL1 313 aa10.08□□□□□ -0.8
CSNK1E-213ENST00000495232 MED30Q96HR3 178 aa10.08□□□□□ -0.8
CSNK1E-213ENST00000495232 NRIP2Q9BQI9 281 aa10.08□□□□□ -0.8
CSNK1E-213ENST00000495232 BEX2Q9BXY8 128 aa10.08□□□□□ -0.8
CSNK1E-213ENST00000495232 SHARPINQ9H0F6 387 aa10.08□□□□□ -0.8
CSNK1E-213ENST00000495232 SMURF1Q9HCE7 757 aa10.08□□□□□ -0.8
CSNK1E-213ENST00000495232 TMEM138Q9NPI0 162 aa10.08□□□□□ -0.8
CSNK1E-213ENST00000495232 ACOT13Q9NPJ3 140 aa10.08□□□□□ -0.8
CSNK1E-213ENST00000495232 TMEM160Q9NX00 188 aa10.08□□□□□ -0.8
CSNK1E-213ENST00000495232 KAAG1Q9UBP8 84 aa10.08□□□□□ -0.8
CSNK1E-213ENST00000495232 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.07□□□□□ -0.82e-11■■□□□ 14.4
CSNK1E-213ENST00000495232 LOC105371242A0A075B767 164 aa10.07□□□□□ -0.8
CSNK1E-213ENST00000495232 RFPL4AA6NLU0 287 aa10.07□□□□□ -0.8
CSNK1E-213ENST00000495232 A8MXK9 166 aa10.07□□□□□ -0.8
CSNK1E-213ENST00000495232 RFPL4AL1F8VTS6 287 aa10.07□□□□□ -0.8
CSNK1E-213ENST00000495232 SPRY1O43609 319 aaPredicted RBP10.07□□□□□ -0.8
CSNK1E-213ENST00000495232 ALDOBP05062 364 aa10.07□□□□□ -0.8
CSNK1E-213ENST00000495232 PSG2P11465 335 aa10.07□□□□□ -0.8
CSNK1E-213ENST00000495232 CPEP16870 476 aa10.07□□□□□ -0.8
CSNK1E-213ENST00000495232 PSMA1P25786 263 aaKnown RBP10.07□□□□□ -0.8
CSNK1E-213ENST00000495232 ZFP36P26651 326 aaKnown RBP10.07□□□□□ -0.8
CSNK1E-213ENST00000495232 IL13RA1P78552 427 aa10.07□□□□□ -0.8
CSNK1E-213ENST00000495232 IKZF1Q13422 519 aa10.07□□□□□ -0.8
CSNK1E-213ENST00000495232 TPBGQ13641 420 aa10.07□□□□□ -0.8
CSNK1E-213ENST00000495232 DOC2BQ14184 412 aa10.07□□□□□ -0.8
CSNK1E-213ENST00000495232 CR1LQ2VPA4 569 aa10.07□□□□□ -0.8
CSNK1E-213ENST00000495232 ATPAF1Q5TC12 328 aaPredicted RBP10.07□□□□□ -0.8
CSNK1E-213ENST00000495232 DDI2Q5TDH0 399 aa10.07□□□□□ -0.8
CSNK1E-213ENST00000495232 TEX29Q8N6K0 151 aa10.07□□□□□ -0.8
CSNK1E-213ENST00000495232 OR51A2Q8NGJ7 313 aa10.07□□□□□ -0.8
CSNK1E-213ENST00000495232 ANGPTL6Q8NI99 470 aa10.07□□□□□ -0.8
CSNK1E-213ENST00000495232 ST8SIA4Q92187 359 aa10.07□□□□□ -0.8
CSNK1E-213ENST00000495232 FCGR1BQ92637 280 aa10.07□□□□□ -0.8
CSNK1E-213ENST00000495232 EMG1Q92979 244 aaKnown RBP10.07□□□□□ -0.8
CSNK1E-213ENST00000495232 TMEM203Q969S6 136 aa10.07□□□□□ -0.8
CSNK1E-213ENST00000495232 S100A13Q99584 98 aa10.07□□□□□ -0.8
CSNK1E-213ENST00000495232 FAM192AQ9GZU8 254 aa10.07□□□□□ -0.8
CSNK1E-213ENST00000495232 ELL3Q9HB65 397 aaPredicted RBP10.07□□□□□ -0.8
CSNK1E-213ENST00000495232 NOX4Q9NPH5 578 aa10.07□□□□□ -0.8
CSNK1E-213ENST00000495232 MTCH1Q9NZJ7 389 aa10.07□□□□□ -0.8
CSNK1E-213ENST00000495232 LPAR3Q9UBY5 353 aa10.07□□□□□ -0.8
CSNK1E-213ENST00000495232 OR14J1Q9UGF5 321 aa10.07□□□□□ -0.8
CSNK1E-213ENST00000495232 GLS2Q9UI32 602 aa10.07□□□□□ -0.8
CSNK1E-213ENST00000495232 CDC42EP3Q9UKI2 254 aa10.07□□□□□ -0.8
CSNK1E-213ENST00000495232 FOXJ3Q9UPW0 622 aa10.07□□□□□ -0.8
CSNK1E-213ENST00000495232 NIPBLQ6KC79 2804 aaeCLIP10.07□□□□□ -0.8
CSNK1E-213ENST00000495232 MALRD1Q5VYJ5 2156 aa10.07□□□□□ -0.8
CSNK1E-213ENST00000495232 ABCA2Q9BZC7 2435 aa10.06□□□□□ -0.8
CSNK1E-213ENST00000495232 TRBV5-7A0A0A0MS05 114 aa10.06□□□□□ -0.8
CSNK1E-213ENST00000495232 PPIAL4CA0A0B4J2A2 164 aa10.06□□□□□ -0.8
CSNK1E-213ENST00000495232 J3QLI3 93 aa10.06□□□□□ -0.8
CSNK1E-213ENST00000495232 DVL1O14640 695 aa10.06□□□□□ -0.8
CSNK1E-213ENST00000495232 TNFRSF13BO14836 293 aaPredicted RBP10.06□□□□□ -0.8
CSNK1E-213ENST00000495232 GPR37O15354 613 aa10.06□□□□□ -0.8
CSNK1E-213ENST00000495232 ANGPTL7O43827 346 aa10.06□□□□□ -0.8
CSNK1E-213ENST00000495232 TNFAIP8O95379 198 aa10.06□□□□□ -0.8
CSNK1E-213ENST00000495232 ECDO95905 644 aaPredicted RBP10.06□□□□□ -0.8
CSNK1E-213ENST00000495232 KNG1P01042 644 aa10.06□□□□□ -0.8
CSNK1E-213ENST00000495232 FSTP19883 344 aa10.06□□□□□ -0.8
CSNK1E-213ENST00000495232 BCL3P20749 454 aa10.06□□□□□ -0.8
CSNK1E-213ENST00000495232 PRDX2P32119 198 aa10.06□□□□□ -0.8
CSNK1E-213ENST00000495232 ZNF93P35789 620 aaPredicted RBP10.06□□□□□ -0.8
CSNK1E-213ENST00000495232 CAPZA1P52907 286 aa10.06□□□□□ -0.8
CSNK1E-213ENST00000495232 CHRFAM7AQ494W8 412 aa10.06□□□□□ -0.8
CSNK1E-213ENST00000495232 KCTD21Q4G0X4 260 aa10.06□□□□□ -0.8
CSNK1E-213ENST00000495232 ARMCX4Q5H9R4 360 aa10.06□□□□□ -0.8
CSNK1E-213ENST00000495232 FAM120AOSQ5T036 256 aa10.06□□□□□ -0.8
CSNK1E-213ENST00000495232 ZNF529Q6P280 563 aa10.06□□□□□ -0.8
CSNK1E-213ENST00000495232 ZNF773Q6PK81 442 aa10.06□□□□□ -0.8
CSNK1E-213ENST00000495232 ZNF841Q6ZN19 808 aa10.06□□□□□ -0.8
CSNK1E-213ENST00000495232 CEACAM19Q7Z692 300 aa10.06□□□□□ -0.8
CSNK1E-213ENST00000495232 SAXO1Q8IYX7 474 aa10.06□□□□□ -0.8
CSNK1E-213ENST00000495232 SPARTQ8N0X7 666 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms