RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, human

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-222	ENST00000495071	MRPS17	Q9Y2R5	130 aa	Known RBP	11.73	□□□□□ -0.53
SUPT20H-222	ENST00000495071	NSG2	Q9Y328	171 aa		11.73	□□□□□ -0.53
SUPT20H-222	ENST00000495071	GAPDH	P04406	335 aa	Known RBP	11.73	□□□□□ -0.53
SUPT20H-222	ENST00000495071	CD5	P06127	495 aa		11.73	□□□□□ -0.53
SUPT20H-222	ENST00000495071	HIST3H3	Q16695	136 aa		11.73	□□□□□ -0.53
SUPT20H-222	ENST00000495071	LYZL2	Q7Z4W2	148 aa		11.73	□□□□□ -0.53
SUPT20H-222	ENST00000495071	TMEM156	Q8N614	296 aa		11.73	□□□□□ -0.53
SUPT20H-222	ENST00000495071	ISOC2	Q96AB3	205 aa		11.73	□□□□□ -0.53
SUPT20H-222	ENST00000495071	SPSB2	Q99619	263 aa		11.73	□□□□□ -0.53
SUPT20H-222	ENST00000495071	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	11.73	□□□□□ -0.53
SUPT20H-222	ENST00000495071	IFNA4	P05014	189 aa		11.73	□□□□□ -0.53
SUPT20H-222	ENST00000495071	HEXA	P06865	529 aa		11.73	□□□□□ -0.53
SUPT20H-222	ENST00000495071	CELA2A	P08217	269 aa		11.73	□□□□□ -0.53
SUPT20H-222	ENST00000495071	PDCD1	Q15116	288 aa		11.73	□□□□□ -0.53
SUPT20H-222	ENST00000495071	SLC22A25	Q6T423	547 aa		11.73	□□□□□ -0.53
SUPT20H-222	ENST00000495071	MAML2	Q8IZL2	1156 aa	Predicted RBP	11.73	□□□□□ -0.53
SUPT20H-222	ENST00000495071	BATF2	Q8N1L9	274 aa		11.73	□□□□□ -0.53
SUPT20H-222	ENST00000495071	SSC4D	Q8WTU2	575 aa		11.73	□□□□□ -0.53
SUPT20H-222	ENST00000495071		V9GYS6	101 aa		11.73	□□□□□ -0.53
SUPT20H-222	ENST00000495071	IGLV3-32	A0A0A0MS00	114 aa		11.72	□□□□□ -0.53
SUPT20H-222	ENST00000495071	SGCE	O43556	437 aa		11.72	□□□□□ -0.53
SUPT20H-222	ENST00000495071	C1QL1	O75973	258 aa		11.72	□□□□□ -0.53
SUPT20H-222	ENST00000495071	MBP	P02686	304 aa	Predicted RBP	11.72	□□□□□ -0.53
SUPT20H-222	ENST00000495071	DAO	P14920	347 aa		11.72	□□□□□ -0.53
SUPT20H-222	ENST00000495071	PTAFR	P25105	342 aa		11.72	□□□□□ -0.53
SUPT20H-222	ENST00000495071	ALDH3B1	P43353	468 aa		11.72	□□□□□ -0.53
SUPT20H-222	ENST00000495071	FHIT	P49789	147 aa		11.72	□□□□□ -0.53
SUPT20H-222	ENST00000495071	HERV-K104	P61576	105 aa		11.72	□□□□□ -0.53
SUPT20H-222	ENST00000495071	GUK1	Q16774	197 aa		11.72	□□□□□ -0.53
SUPT20H-222	ENST00000495071		Q96M66	194 aa		11.72	□□□□□ -0.53
SUPT20H-222	ENST00000495071	NAA60	Q9H7X0	242 aa		11.72	□□□□□ -0.53
SUPT20H-222	ENST00000495071	COLCA2	A8K830	154 aa		11.72	□□□□□ -0.53
SUPT20H-222	ENST00000495071	PRSS44	E7EML9	344 aa		11.72	□□□□□ -0.53
SUPT20H-222	ENST00000495071	EIF1B	O60739	113 aa	Known RBP	11.72	□□□□□ -0.53
SUPT20H-222	ENST00000495071	ZNF44	P15621	663 aa		11.72	□□□□□ -0.53
SUPT20H-222	ENST00000495071	FKBP2	P26885	142 aa	Known RBP	11.72	□□□□□ -0.53
SUPT20H-222	ENST00000495071	GLP1R	P43220	463 aa		11.72	□□□□□ -0.53
SUPT20H-222	ENST00000495071	AWAT1	Q58HT5	328 aa		11.72	□□□□□ -0.53
SUPT20H-222	ENST00000495071	DTX1	Q86Y01	620 aa		11.72	□□□□□ -0.53
SUPT20H-222	ENST00000495071	SGK3	Q96BR1	496 aa		11.72	□□□□□ -0.53
SUPT20H-222	ENST00000495071	PCED1A	Q9H1Q7	454 aa		11.72	□□□□□ -0.53
SUPT20H-222	ENST00000495071	ZNF576	Q9H609	170 aa		11.72	□□□□□ -0.53
SUPT20H-222	ENST00000495071	COA4	Q9NYJ1	87 aa		11.72	□□□□□ -0.53
SUPT20H-222	ENST00000495071	ZNF581	Q9P0T4	197 aa		11.72	□□□□□ -0.53
SUPT20H-222	ENST00000495071	FBXO7	Q9Y3I1	522 aa		11.72	□□□□□ -0.53
SUPT20H-222	ENST00000495071	POMT1	Q9Y6A1	747 aa		11.72	□□□□□ -0.53
SUPT20H-222	ENST00000495071	PQLC2L	A1A4F0	135 aa		11.72	□□□□□ -0.53
SUPT20H-222	ENST00000495071	PHF1	O43189	567 aa	Predicted RBP	11.72	□□□□□ -0.53
SUPT20H-222	ENST00000495071	ASCL1	P50553	236 aa		11.72	□□□□□ -0.53
SUPT20H-222	ENST00000495071	FAM3A	P98173	230 aa		11.72	□□□□□ -0.53
SUPT20H-222	ENST00000495071	CNN3	Q15417	329 aa	Known RBP	11.72	□□□□□ -0.53
SUPT20H-222	ENST00000495071	HMGN3	Q15651	99 aa		11.72	□□□□□ -0.53
SUPT20H-222	ENST00000495071	SLC16A14	Q7RTX9	510 aa		11.72	□□□□□ -0.53
SUPT20H-222	ENST00000495071	BSCL2	Q96G97	398 aa	Predicted RBP	11.72	□□□□□ -0.53
SUPT20H-222	ENST00000495071	SYT3	Q9BQG1	590 aa		11.72	□□□□□ -0.53
SUPT20H-222	ENST00000495071	FOXI3	A8MTJ6	420 aa	Predicted RBP	11.71	□□□□□ -0.53
SUPT20H-222	ENST00000495071	CTSS	P25774	331 aa		11.71	□□□□□ -0.53
SUPT20H-222	ENST00000495071	CEBPG	P53567	150 aa		11.71	□□□□□ -0.53
SUPT20H-222	ENST00000495071	CCL7	P80098	99 aa		11.71	□□□□□ -0.53
SUPT20H-222	ENST00000495071	TGIF1	Q15583	401 aa		11.71	□□□□□ -0.53
SUPT20H-222	ENST00000495071	C15orf54	Q8N8G6	183 aa		11.71	□□□□□ -0.53
SUPT20H-222	ENST00000495071	UBAC2	Q8NBM4	344 aa		11.71	□□□□□ -0.53
SUPT20H-222	ENST00000495071	ZNF837	Q96EG3	531 aa	Predicted RBP	11.71	□□□□□ -0.53
SUPT20H-222	ENST00000495071	ZNF442	Q9H7R0	627 aa		11.71	□□□□□ -0.53
SUPT20H-222	ENST00000495071	KCNJ16	Q9NPI9	418 aa		11.71	□□□□□ -0.53
SUPT20H-222	ENST00000495071	TUBD1	Q9UJT1	453 aa		11.71	□□□□□ -0.53
SUPT20H-222	ENST00000495071	TNFSF11	O14788	317 aa		11.71	□□□□□ -0.53
SUPT20H-222	ENST00000495071	GLA	P06280	429 aa		11.71	□□□□□ -0.53
SUPT20H-222	ENST00000495071	PATE4	P0C8F1	98 aa		11.71	□□□□□ -0.53
SUPT20H-222	ENST00000495071	ACKR3	P25106	362 aa		11.71	□□□□□ -0.53
SUPT20H-222	ENST00000495071	RBP2	P50120	134 aa		11.71	□□□□□ -0.53
SUPT20H-222	ENST00000495071	GNMT	Q14749	295 aa		11.71	□□□□□ -0.53
SUPT20H-222	ENST00000495071	EIF2S3L	Q2VIR3	472 aa	Known RBP	11.71	□□□□□ -0.53
SUPT20H-222	ENST00000495071	FBXL14	Q8N1E6	418 aa		11.71	□□□□□ -0.53
SUPT20H-222	ENST00000495071	NANP	Q8TBE9	248 aa		11.71	□□□□□ -0.53
SUPT20H-222	ENST00000495071	FAM213B	Q8TBF2	198 aa		11.71	□□□□□ -0.53
SUPT20H-222	ENST00000495071	FBXO17	Q96EF6	278 aa		11.71	□□□□□ -0.53
SUPT20H-222	ENST00000495071	PLA2G2E	Q9NZK7	142 aa		11.71	□□□□□ -0.53
SUPT20H-222	ENST00000495071	CACFD1	Q9UGQ2	172 aa		11.71	□□□□□ -0.53
SUPT20H-222	ENST00000495071	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	11.71	□□□□□ -0.53
SUPT20H-222	ENST00000495071	C7orf77	A4D0Y5	90 aa		11.71	□□□□□ -0.54
SUPT20H-222	ENST00000495071	GEMIN2	O14893	280 aa	Known RBP	11.71	□□□□□ -0.54
SUPT20H-222	ENST00000495071	ST8SIA3	O43173	380 aa		11.71	□□□□□ -0.54
SUPT20H-222	ENST00000495071	EIF3G	O75821	320 aa	Known RBP eCLIP	11.71	□□□□□ -0.54
SUPT20H-222	ENST00000495071	VAMP5	O95183	116 aa		11.71	□□□□□ -0.54
SUPT20H-222	ENST00000495071	PIGY	Q3MUY2	71 aa		11.71	□□□□□ -0.54
SUPT20H-222	ENST00000495071	ZNF774	Q6NX45	483 aa		11.71	□□□□□ -0.54
SUPT20H-222	ENST00000495071	SPSB1	Q96BD6	273 aa		11.71	□□□□□ -0.54
SUPT20H-222	ENST00000495071	UMAD1	C9J7I0	102 aa		11.7	□□□□□ -0.54
SUPT20H-222	ENST00000495071	RRP8	O43159	456 aa	Known RBP	11.7	□□□□□ -0.54
SUPT20H-222	ENST00000495071	OR13C7	P0DN81	318 aa		11.7	□□□□□ -0.54
SUPT20H-222	ENST00000495071	HTR5A	P47898	357 aa		11.7	□□□□□ -0.54
SUPT20H-222	ENST00000495071	NSUN5P2	Q63ZY6	315 aa		11.7	□□□□□ -0.54
SUPT20H-222	ENST00000495071	LGI3	Q8N145	548 aa		11.7	□□□□□ -0.54
SUPT20H-222	ENST00000495071	AKR7L	Q8NHP1	331 aa		11.7	□□□□□ -0.54
SUPT20H-222	ENST00000495071	CCDC74B	Q96LY2	380 aa		11.7	□□□□□ -0.54
SUPT20H-222	ENST00000495071	ZNF286A	Q9HBT8	521 aa		11.7	□□□□□ -0.54
SUPT20H-222	ENST00000495071	SLC2A9	Q9NRM0	540 aa		11.7	□□□□□ -0.54
SUPT20H-222	ENST00000495071	COL5A1	P20908	1838 aa	Predicted RBP	11.7	□□□□□ -0.54
SUPT20H-222	ENST00000495071		A6NLC8	198 aa		11.7	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms