RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 RAB23Q9ULC3 237 aa2.54□□□□□ -2
SMC4-224ENST00000494612 MYH6P13533 1939 aa2.54□□□□□ -2
SMC4-224ENST00000494612 CACNA1BQ00975 2339 aa2.53□□□□□ -2
SMC4-224ENST00000494612 ASPMQ8IZT6 3477 aa2.53□□□□□ -2
SMC4-224ENST00000494612 KCNE1BA0A087WTH5 132 aa2.53□□□□□ -2
SMC4-224ENST00000494612 IGHV1OR15-9A0A0B4J2B8 117 aa2.53□□□□□ -2
SMC4-224ENST00000494612 H0YJW9 148 aa2.53□□□□□ -2
SMC4-224ENST00000494612 K7EM74 188 aa2.53□□□□□ -2
SMC4-224ENST00000494612 RNF113AO15541 343 aaKnown RBP2.53□□□□□ -2
SMC4-224ENST00000494612 NEMFO60524 1076 aa2.53□□□□□ -2
SMC4-224ENST00000494612 SLC19A2O60779 497 aa2.53□□□□□ -2
SMC4-224ENST00000494612 SLC22A5O76082 557 aa2.53□□□□□ -2
SMC4-224ENST00000494612 MPZL1O95297 269 aa2.53□□□□□ -2
SMC4-224ENST00000494612 HLA-DQA1P01909 254 aa2.53□□□□□ -2
SMC4-224ENST00000494612 HLA-DQB1P01920 261 aa2.53□□□□□ -2
SMC4-224ENST00000494612 PGA5P0DJD9 388 aa2.53□□□□□ -2
SMC4-224ENST00000494612 GABRG2P18507 467 aa2.53□□□□□ -2
SMC4-224ENST00000494612 SRMP19623 302 aa2.53□□□□□ -2
SMC4-224ENST00000494612 TALDO1P37837 337 aa2.53□□□□□ -2
SMC4-224ENST00000494612 PRR3P79522 188 aaKnown RBP2.53□□□□□ -2
SMC4-224ENST00000494612 DMTNQ08495 405 aa2.53□□□□□ -2
SMC4-224ENST00000494612 MGAT3Q09327 533 aa2.53□□□□□ -2
SMC4-224ENST00000494612 CDC20Q12834 499 aa2.53□□□□□ -2
SMC4-224ENST00000494612 KIR2DS1Q14954 304 aa2.53□□□□□ -2
SMC4-224ENST00000494612 STK38Q15208 465 aa2.53□□□□□ -2
SMC4-224ENST00000494612 COX19Q49B96 90 aa2.53□□□□□ -2
SMC4-224ENST00000494612 BEX5Q5H9J7 111 aa2.53□□□□□ -2
SMC4-224ENST00000494612 SLC16A13Q7RTY0 426 aa2.53□□□□□ -2
SMC4-224ENST00000494612 TMEM256Q8N2U0 113 aa2.53□□□□□ -2
SMC4-224ENST00000494612 TRIML2Q8N7C3 387 aa2.53□□□□□ -2
SMC4-224ENST00000494612 OR5T3Q8NGG3 340 aa2.53□□□□□ -2
SMC4-224ENST00000494612 OR51F2Q8NH61 342 aa2.53□□□□□ -2
SMC4-224ENST00000494612 LINC01560Q8TB33 94 aa2.53□□□□□ -2
SMC4-224ENST00000494612 RAB1CQ92928 201 aa2.53□□□□□ -2
SMC4-224ENST00000494612 APH1AQ96BI3 265 aa2.53□□□□□ -2
SMC4-224ENST00000494612 RBBP8Q99708 897 aa2.53□□□□□ -2
SMC4-224ENST00000494612 RNF5Q99942 180 aa2.53□□□□□ -2
SMC4-224ENST00000494612 TIMM29Q9BSF4 260 aa2.53□□□□□ -2
SMC4-224ENST00000494612 GGTLC1Q9BX51 225 aa2.53□□□□□ -2
SMC4-224ENST00000494612 FBXO44Q9H4M3 255 aa2.53□□□□□ -2
SMC4-224ENST00000494612 AGPAT3Q9NRZ7 376 aa2.53□□□□□ -2
SMC4-224ENST00000494612 CLN6Q9NWW5 311 aa2.53□□□□□ -2
SMC4-224ENST00000494612 GINS2Q9Y248 185 aa2.53□□□□□ -2
SMC4-224ENST00000494612 DOCK5Q9H7D0 1870 aa2.53□□□□□ -2
SMC4-224ENST00000494612 PTPRZ1P23471 2315 aaPredicted RBP2.53□□□□□ -2
SMC4-224ENST00000494612 MYO7AQ13402 2215 aa2.53□□□□□ -2
SMC4-224ENST00000494612 FANCMQ8IYD8 2048 aa2.52□□□□□ -2.01
SMC4-224ENST00000494612 MIA3Q5JRA6 1907 aa2.52□□□□□ -2.01
SMC4-224ENST00000494612 LOXHD1Q8IVV2 1947 aa2.52□□□□□ -2.01
SMC4-224ENST00000494612 FAM186AA6NE01 2351 aa2.52□□□□□ -2.01
SMC4-224ENST00000494612 PATJQ8NI35 1801 aa2.52□□□□□ -2.01
SMC4-224ENST00000494612 BAHCC1Q9P281 2608 aa2.52□□□□□ -2.01
SMC4-224ENST00000494612 IGHV1-69DA0A0B4J2H0 117 aa2.52□□□□□ -2.01
SMC4-224ENST00000494612 A0A1W2PPV4 95 aa2.52□□□□□ -2.01
SMC4-224ENST00000494612 SERPINE3A8MV23 424 aa2.52□□□□□ -2.01
SMC4-224ENST00000494612 M0QX08 132 aa2.52□□□□□ -2.01
SMC4-224ENST00000494612 SIVA1O15304 175 aa2.52□□□□□ -2.01
SMC4-224ENST00000494612 OXTP01178 125 aa2.52□□□□□ -2.01
SMC4-224ENST00000494612 HLA-HP01893 362 aa2.52□□□□□ -2.01
SMC4-224ENST00000494612 CRYGCP07315 174 aa2.52□□□□□ -2.01
SMC4-224ENST00000494612 ZNF688P0C7X2 276 aa2.52□□□□□ -2.01
SMC4-224ENST00000494612 PGA4P0DJD7 388 aa2.52□□□□□ -2.01
SMC4-224ENST00000494612 PGA3P0DJD8 388 aa2.52□□□□□ -2.01
SMC4-224ENST00000494612 C1GALT1C1LP0DN25 315 aa2.52□□□□□ -2.01
SMC4-224ENST00000494612 RAB4AP20338 218 aa2.52□□□□□ -2.01
SMC4-224ENST00000494612 CD82P27701 267 aa2.52□□□□□ -2.01
SMC4-224ENST00000494612 LOXP28300 417 aaPredicted RBP2.52□□□□□ -2.01
SMC4-224ENST00000494612 GGT2P36268 569 aa2.52□□□□□ -2.01
SMC4-224ENST00000494612 CXCL12P48061 93 aa2.52□□□□□ -2.01
SMC4-224ENST00000494612 PSMD4P55036 377 aaKnown RBP2.52□□□□□ -2.01
SMC4-224ENST00000494612 SYNJ2BPP57105 145 aa2.52□□□□□ -2.01
SMC4-224ENST00000494612 ZNF121P58317 390 aaPredicted RBP2.52□□□□□ -2.01
SMC4-224ENST00000494612 CRADDP78560 199 aa2.52□□□□□ -2.01
SMC4-224ENST00000494612 HNRNPA1L2Q32P51 320 aaKnown RBP2.52□□□□□ -2.01
SMC4-224ENST00000494612 NKAIN1Q4KMZ8 207 aa2.52□□□□□ -2.01
SMC4-224ENST00000494612 N4BP2L1Q5TBK1 243 aaPredicted RBP2.52□□□□□ -2.01
SMC4-224ENST00000494612 ADNP2Q6IQ32 1131 aa2.52□□□□□ -2.01
SMC4-224ENST00000494612 SLC25A34Q6PIV7 304 aa2.52□□□□□ -2.01
SMC4-224ENST00000494612 VKORC1L1Q8N0U8 176 aa2.52□□□□□ -2.01
SMC4-224ENST00000494612 RNF182Q8N6D2 247 aa2.52□□□□□ -2.01
SMC4-224ENST00000494612 NECAP1Q8NC96 275 aa2.52□□□□□ -2.01
SMC4-224ENST00000494612 TMEM104Q8NE00 496 aa2.52□□□□□ -2.01
SMC4-224ENST00000494612 LILRB4Q8NHJ6 448 aa2.52□□□□□ -2.01
SMC4-224ENST00000494612 MITD1Q8WV92 249 aa2.52□□□□□ -2.01
SMC4-224ENST00000494612 PIH1D2Q8WWB5 315 aa2.52□□□□□ -2.01
SMC4-224ENST00000494612 RPEQ96AT9 228 aa2.52□□□□□ -2.01
SMC4-224ENST00000494612 TMEM243Q9BU79 118 aa2.52□□□□□ -2.01
SMC4-224ENST00000494612 NAA50Q9GZZ1 169 aaKnown RBP2.52□□□□□ -2.01
SMC4-224ENST00000494612 OR2AG1Q9H205 316 aa2.52□□□□□ -2.01
SMC4-224ENST00000494612 DYRK4Q9NR20 520 aa2.52□□□□□ -2.01
SMC4-224ENST00000494612 RGS18Q9NS28 235 aa2.52□□□□□ -2.01
SMC4-224ENST00000494612 GGA2Q9UJY4 613 aa2.52□□□□□ -2.01
SMC4-224ENST00000494612 DDX19BQ9UMR2 479 aa2.52□□□□□ -2.01
SMC4-224ENST00000494612 YARS2Q9Y2Z4 477 aaKnown RBP2.52□□□□□ -2.01
SMC4-224ENST00000494612 BZW2Q9Y6E2 419 aaKnown RBP2.52□□□□□ -2.01
SMC4-224ENST00000494612 PCM1Q15154 2024 aa2.51□□□□□ -2.01
SMC4-224ENST00000494612 CLUHO75153 1309 aa2.51□□□□□ -2.01
SMC4-224ENST00000494612 C2orf16Q68DN1 1984 aa2.51□□□□□ -2.01
SMC4-224ENST00000494612 WDFY3Q8IZQ1 3526 aa2.51□□□□□ -2.01
SMC4-224ENST00000494612 IGKV6-21A0A0C4DH24 114 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms